View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0253_low_38 (Length: 265)
Name: NF0253_low_38
Description: NF0253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0253_low_38 |
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Alignment Details
Target: chr3 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 39 - 163
Target Start/End: Complemental strand, 3811170 - 3811046
Alignment:
Q |
39 |
ctgtgaagcgtgaggttatgcatgtgctgaagatgtgtttcaatggaacatagctcattaatgtaattttcatggatattgataacttcaaccgataaca |
138 |
Q |
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T |
3811170 |
ctgtgaagcgtgaggttatgcatgtgctgaagatgtgtttcaatggaatatagctcattaatgtaattttcatggatattgataacttcaaccgataaca |
3811071 |
T |
 |
Q |
139 |
aacccttttaagagtaatgaatttg |
163 |
Q |
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T |
3811070 |
aacccttttaagagtaatgaatttg |
3811046 |
T |
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