View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0253_low_47 (Length: 231)
Name: NF0253_low_47
Description: NF0253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0253_low_47 |
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Alignment Details
Target: chr3 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 30373067 - 30373196
Alignment:
| Q |
21 |
tatatatagagtagtatttataaaaaataatactaatacgtacgtatactgcatgttgcatgacttttaacatgttaggcaagatttgaaacgaagaatg |
120 |
Q |
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| T |
30373067 |
tatatatagagtagtatttataaaaaataatactaatacgtacgtatactgcatgttgcatgacttttaacatgttaggcaacatttgaaacgaagaatg |
30373166 |
T |
|
| Q |
121 |
accatttagaagcctcttaacatattcttc |
150 |
Q |
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||||||||||||||||||||||| |||||| |
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| T |
30373167 |
accatttagaagcctcttaacattttcttc |
30373196 |
T |
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