View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0253_low_50 (Length: 225)
Name: NF0253_low_50
Description: NF0253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0253_low_50 |
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Alignment Details
Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 7944852 - 7944976
Alignment:
| Q |
1 |
atgttaaagtattaacatatgaagaaattgctgaggcaacaaacaacttcggttctgattgtcttgtgggagaaggtggatttgggaatgtgtataaagg |
100 |
Q |
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| T |
7944852 |
atgttaaagtattaacatatgaagaaattgctgaggcaacaaacaacttcggttctgattgtcttgtgggagaaggtggatttgggaatgtgtataaagg |
7944951 |
T |
|
| Q |
101 |
atacatgaaaagcattgaacaagtt |
125 |
Q |
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| T |
7944952 |
atacatgaaaagcattgaacaagtt |
7944976 |
T |
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