View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0254_2D_low_17 (Length: 316)
Name: NF0254_2D_low_17
Description: NF0254_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0254_2D_low_17 |
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Alignment Details
Target: chr6 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 32469310 - 32469588
Alignment:
| Q |
19 |
ttcatcgatcaagcgatgagactattgatcattatatcccaaaaacaagatgcatatctcactttcgataatttgagtcgtttggtggagttaaagagaa |
118 |
Q |
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|||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||||| |
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| T |
32469310 |
ttcatcgatcaagcgatgagaccattgatcactatatcccaaaaacaagatgcgtatctaactctcgataatttgagtcgtttagtggagttaaagagaa |
32469409 |
T |
|
| Q |
119 |
gttatagatatttggttccttaattcatttaattgtttcattttgttcccttattgttaatagtcccacatcagatgatgctaagaagttactaataact |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| || ||||||||||||||||||||||| |
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| T |
32469410 |
gttatagatatttggttccttaattcatttaattgtttaattttgttctcttattgttaagagtcccacatcaaataatgctaagaagttactaataact |
32469509 |
T |
|
| Q |
219 |
tagtttccattaaaaaattcaaaatatttatatttttaagacattgtgggcaaatgcaagaagatatagagcatcatac |
297 |
Q |
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||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||| |
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| T |
32469510 |
tagtttccattaaaaaattcaaaatatctatatttttacgacattgtgggcaaatgcaagaagatatagggcatcatac |
32469588 |
T |
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