View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0254_2D_low_30 (Length: 264)
Name: NF0254_2D_low_30
Description: NF0254_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0254_2D_low_30 |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 361817 - 361573
Alignment:
| Q |
1 |
ataatgtgactgctatggttggtgctggtgtcctagggttaccatttgctttatcccagcttggatggtatttatatcttaattcattcaatttcatcac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
361817 |
ataatgtgactgctatggttggtgctggtgtcctagggttaccatttgctttatcccagcttggatggtatttatatcttaattcattcaatttcatcac |
361718 |
T |
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| Q |
101 |
ttcaaactcttcattaccactatctaggtcacttactcgacaccaatgaaaacacatcaccactggtaacaaatcgagaacatgagttaaggatgtaatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
361717 |
ttcaaactcttcattaccactatctaggtcacttactcgacaccaatgaaaacacatcaccactggtaacaaatcgagaacatgagttaaggatgtaatc |
361618 |
T |
|
| Q |
201 |
acgtgtgtcggtagggtacactaacatatggacactagtaataat |
245 |
Q |
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|||||| |||||| |||||||||||||||||||||| |||||||| |
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| T |
361617 |
acgtgtatcggtatggtacactaacatatggacacttgtaataat |
361573 |
T |
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