View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0255_low_29 (Length: 290)
Name: NF0255_low_29
Description: NF0255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0255_low_29 |
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Alignment Details
Target: chr3 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 41312385 - 41312262
Alignment:
| Q |
114 |
gtacaaattattttacatcatttatcaaacccaataagtaaagaataaaatttataaatggtaaatttgaaaaatatactaattatcaactctgaacata |
213 |
Q |
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| T |
41312385 |
gtacaaattattttacatcatttatcaaacccaataagtaaagaataaaatttataaatggtaaatttgaaaaatatactaattatcaactctgaacata |
41312286 |
T |
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| Q |
214 |
aattaactataagcttgttactct |
237 |
Q |
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|||||||||||||||||||||||| |
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| T |
41312285 |
aattaactataagcttgttactct |
41312262 |
T |
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