View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0255_low_48 (Length: 208)
Name: NF0255_low_48
Description: NF0255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0255_low_48 |
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Alignment Details
Target: chr6 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 30128252 - 30128403
Alignment:
| Q |
29 |
gagtgagatgaacacaaaataaagtatatagtgatgaaaattttgtgctgggatcccgaatattgtctcttgaggtagtgtgtgccccattatccctcaa |
128 |
Q |
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|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30128252 |
gagtgaaaagaacacaaaataaagtatatagtgatgaaaattttgtgctgggatcccgaatattgtctcttgaggtagtgtgtgccccattatccctcaa |
30128351 |
T |
|
| Q |
129 |
atgtctgcgcttcttctgttgtttgctccagattctgttctggtttttctta |
180 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30128352 |
atgtctgcgcttcttctgttgtttgctccagattctgttctggtttttctta |
30128403 |
T |
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