View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0256-INSERTION-8 (Length: 658)

Name: NF0256-INSERTION-8
Description: NF0256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0256-INSERTION-8
NF0256-INSERTION-8
[»] chr4 (40 HSPs)
chr4 (192-658)||(44235740-44236206)
chr4 (42-195)||(27550351-27550504)
chr4 (12-196)||(1771170-1771366)
chr4 (42-192)||(33703183-33703333)
chr4 (42-192)||(43949709-43949859)
chr4 (42-195)||(55966251-55966404)
chr4 (42-192)||(27893750-27893900)
chr4 (26-192)||(51512173-51512339)
chr4 (12-194)||(28982728-28982922)
chr4 (42-193)||(23036022-23036173)
chr4 (12-192)||(35017733-35017924)
chr4 (42-192)||(25051735-25051885)
chr4 (42-194)||(27864606-27864758)
chr4 (42-186)||(48463364-48463508)
chr4 (42-168)||(27316644-27316771)
chr4 (48-195)||(43735790-43735937)
chr4 (42-168)||(31680944-31681070)
chr4 (50-168)||(23204710-23204828)
chr4 (42-168)||(39631143-39631269)
chr4 (42-168)||(45490245-45490371)
chr4 (14-192)||(43514594-43514784)
chr4 (14-162)||(46412407-46412557)
chr4 (12-152)||(12496956-12497108)
chr4 (12-100)||(36004116-36004204)
chr4 (54-153)||(41878460-41878559)
chr4 (61-194)||(21687067-21687200)
chr4 (42-100)||(17619152-17619210)
chr4 (42-168)||(41848013-41848139)
chr4 (42-100)||(55272376-55272434)
chr4 (42-198)||(28988515-28988670)
chr4 (42-100)||(19879996-19880054)
chr4 (42-88)||(35037047-35037093)
chr4 (12-51)||(25051693-25051732)
chr4 (63-186)||(41327457-41327580)
chr4 (42-100)||(712002-712060)
chr4 (42-100)||(38851555-38851613)
chr4 (42-100)||(48435579-48435637)
chr4 (12-48)||(711960-711996)
chr4 (15-51)||(23204839-23204875)
chr4 (12-40)||(28988473-28988501)
[»] chr2 (29 HSPs)
chr2 (12-191)||(42849768-42849946)
chr2 (14-197)||(43490304-43490499)
chr2 (42-195)||(19047199-19047352)
chr2 (42-192)||(43335671-43335821)
chr2 (42-194)||(30838674-30838826)
chr2 (12-192)||(1750414-1750606)
chr2 (12-192)||(16096747-16096940)
chr2 (42-193)||(4764633-4764784)
chr2 (12-193)||(12302160-12302353)
chr2 (50-193)||(39149201-39149342)
chr2 (42-156)||(13780679-13780793)
chr2 (42-195)||(34817681-34817834)
chr2 (42-94)||(33229344-33229396)
chr2 (42-100)||(43114599-43114657)
chr2 (13-45)||(19047158-19047190)
chr2 (54-100)||(4451950-4451996)
chr2 (42-100)||(11825654-11825712)
chr2 (42-100)||(12415460-12415518)
chr2 (42-100)||(12427520-12427578)
chr2 (42-100)||(34895741-34895799)
chr2 (42-100)||(41281974-41282032)
chr2 (14-51)||(7070418-7070455)
chr2 (12-48)||(966898-966934)
chr2 (12-48)||(4764790-4764826)
chr2 (12-48)||(16803968-16804004)
chr2 (12-48)||(16843250-16843286)
chr2 (12-48)||(18491705-18491741)
chr2 (146-194)||(29739358-29739406)
chr2 (12-48)||(43114557-43114593)
[»] chr3 (27 HSPs)
chr3 (12-193)||(52629840-52630021)
chr3 (13-195)||(42394324-42394518)
chr3 (42-192)||(54237138-54237288)
chr3 (12-193)||(46941053-46941246)
chr3 (12-195)||(47190931-47191125)
chr3 (42-192)||(24688310-24688460)
chr3 (42-192)||(40808907-40809057)
chr3 (42-192)||(45126836-45126986)
chr3 (50-192)||(53581766-53581908)
chr3 (42-195)||(36150172-36150325)
chr3 (12-193)||(25413681-25413874)
chr3 (12-192)||(42100688-42100880)
chr3 (50-192)||(40480799-40480941)
chr3 (12-194)||(54246054-54246248)
chr3 (42-150)||(53273634-53273742)
chr3 (42-144)||(51249350-51249452)
chr3 (50-150)||(27748613-27748713)
chr3 (120-194)||(1078338-1078412)
chr3 (42-100)||(9434166-9434224)
chr3 (42-100)||(10457892-10457950)
chr3 (135-195)||(29556864-29556924)
chr3 (13-45)||(54237097-54237129)
chr3 (12-51)||(36150130-36150169)
chr3 (50-100)||(4190265-4190315)
chr3 (42-88)||(25996310-25996356)
chr3 (42-100)||(51757635-51757693)
chr3 (12-48)||(4190329-4190365)
[»] chr1 (25 HSPs)
chr1 (12-193)||(4888055-4888235)
chr1 (12-192)||(43570994-43571186)
chr1 (42-198)||(48498864-48499020)
chr1 (42-193)||(4401370-4401521)
chr1 (12-192)||(5489776-5489968)
chr1 (47-198)||(7447872-7448023)
chr1 (42-191)||(37814820-37814969)
chr1 (42-194)||(24769405-24769557)
chr1 (42-193)||(2497469-2497620)
chr1 (50-193)||(50448167-50448310)
chr1 (42-196)||(750209-750363)
chr1 (45-192)||(23989431-23989578)
chr1 (42-100)||(48119670-48119728)
chr1 (42-100)||(35003336-35003394)
chr1 (42-100)||(38335960-38336018)
chr1 (42-100)||(44112719-44112777)
chr1 (42-100)||(46168425-46168483)
chr1 (42-100)||(41065195-41065253)
chr1 (42-100)||(45427745-45427803)
chr1 (42-100)||(45639732-45639790)
chr1 (42-100)||(45705867-45705925)
chr1 (12-48)||(14427347-14427383)
chr1 (12-48)||(35003294-35003330)
chr1 (12-48)||(41065153-41065189)
chr1 (12-48)||(44112677-44112713)
[»] chr8 (29 HSPs)
chr8 (12-192)||(9241564-9241744)
chr8 (12-193)||(11582766-11582959)
chr8 (12-193)||(36743390-36743583)
chr8 (42-192)||(2547038-2547188)
chr8 (42-196)||(20148802-20148956)
chr8 (12-191)||(42197344-42197535)
chr8 (14-192)||(42295197-42295386)
chr8 (42-187)||(29705404-29705549)
chr8 (42-186)||(29800864-29801008)
chr8 (42-164)||(5754945-5755067)
chr8 (42-192)||(31384706-31384856)
chr8 (42-191)||(26125677-26125825)
chr8 (41-193)||(45397357-45397508)
chr8 (14-198)||(30912464-30912660)
chr8 (42-192)||(3743813-3743963)
chr8 (42-194)||(30660648-30660800)
chr8 (45-168)||(2165895-2166018)
chr8 (42-195)||(1375584-1375737)
chr8 (12-100)||(10678152-10678240)
chr8 (14-96)||(42699259-42699353)
chr8 (42-168)||(40528566-40528692)
chr8 (12-47)||(28977146-28977181)
chr8 (42-100)||(18066718-18066776)
chr8 (42-100)||(34304830-34304888)
chr8 (42-100)||(35181558-35181616)
chr8 (13-51)||(45397317-45397355)
chr8 (12-51)||(2166024-2166063)
chr8 (12-48)||(19386634-19386670)
chr8 (12-48)||(35181516-35181552)
[»] scaffold0038 (2 HSPs)
scaffold0038 (42-195)||(112697-112850)
scaffold0038 (13-45)||(112656-112688)
[»] chr6 (18 HSPs)
chr6 (12-194)||(9698239-9698433)
chr6 (42-198)||(7367591-7367747)
chr6 (47-194)||(21279976-21280123)
chr6 (42-193)||(21293584-21293735)
chr6 (42-192)||(24203895-24204045)
chr6 (12-194)||(7273241-7273435)
chr6 (42-191)||(13743130-13743279)
chr6 (42-191)||(13748630-13748779)
chr6 (12-198)||(30014343-30014541)
chr6 (42-194)||(3213442-3213594)
chr6 (12-196)||(26669913-26670109)
chr6 (12-194)||(26466799-26466993)
chr6 (42-186)||(7292789-7292933)
chr6 (42-192)||(30736024-30736174)
chr6 (50-100)||(27441592-27441642)
chr6 (42-100)||(33242445-33242503)
chr6 (42-101)||(33253955-33254014)
chr6 (14-48)||(24204051-24204085)
[»] chr7 (29 HSPs)
chr7 (12-193)||(24000919-24001112)
chr7 (12-192)||(42538339-42538531)
chr7 (42-192)||(32029725-32029875)
chr7 (42-196)||(44326220-44326374)
chr7 (12-198)||(5810826-5811024)
chr7 (42-196)||(35069763-35069917)
chr7 (42-192)||(41861716-41861868)
chr7 (42-193)||(44416841-44416992)
chr7 (42-192)||(43343532-43343682)
chr7 (42-186)||(5015437-5015581)
chr7 (42-192)||(10573791-10573941)
chr7 (42-168)||(38160511-38160637)
chr7 (42-168)||(42972894-42973020)
chr7 (42-195)||(16180262-16180415)
chr7 (42-199)||(4638100-4638257)
chr7 (42-194)||(45326062-45326214)
chr7 (50-189)||(27393171-27393310)
chr7 (48-168)||(26898334-26898454)
chr7 (80-196)||(47279628-47279744)
chr7 (47-194)||(9216348-9216495)
chr7 (59-167)||(43317502-43317610)
chr7 (42-167)||(5194164-5194289)
chr7 (61-141)||(24280555-24280635)
chr7 (45-100)||(31513332-31513387)
chr7 (12-45)||(38160661-38160694)
chr7 (12-43)||(9216302-9216333)
chr7 (42-100)||(31408633-31408691)
chr7 (42-88)||(40236961-40237007)
chr7 (12-40)||(41861674-41861702)
[»] chr5 (17 HSPs)
chr5 (12-193)||(2614556-2614749)
chr5 (42-192)||(41334571-41334721)
chr5 (42-194)||(7617175-7617327)
chr5 (42-193)||(5257037-5257188)
chr5 (12-192)||(18033982-18034174)
chr5 (42-193)||(33801511-33801662)
chr5 (12-167)||(22512305-22512472)
chr5 (42-186)||(38470621-38470765)
chr5 (94-194)||(25914902-25915002)
chr5 (47-167)||(39122366-39122486)
chr5 (12-51)||(33855104-33855143)
chr5 (42-100)||(17208116-17208174)
chr5 (42-100)||(32473394-32473452)
chr5 (14-47)||(25915052-25915085)
chr5 (47-100)||(30622719-30622772)
chr5 (12-40)||(7617133-7617161)
chr5 (12-40)||(41334735-41334763)
[»] scaffold0119 (1 HSPs)
scaffold0119 (12-196)||(685-881)
[»] scaffold0187 (2 HSPs)
scaffold0187 (12-192)||(14097-14288)
scaffold0187 (12-192)||(24425-24616)
[»] scaffold0385 (1 HSPs)
scaffold0385 (42-192)||(11293-11443)
[»] scaffold0157 (1 HSPs)
scaffold0157 (12-152)||(23369-23521)
[»] scaffold0003 (1 HSPs)
scaffold0003 (50-100)||(45719-45769)
[»] scaffold0100 (1 HSPs)
scaffold0100 (42-100)||(35456-35514)


Alignment Details
Target: chr4 (Bit Score: 451; Significance: 0; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 451; E-Value: 0
Query Start/End: Original strand, 192 - 658
Target Start/End: Original strand, 44235740 - 44236206
Alignment:
Q  192 cttttttcttataaaaccaagtaaccaaccatgaccgatcaccaatttaaaagagacctgtccttttctttcaatcacaaatgcatggtcctaaatgaca 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44235740 cttttttcttataaaaccaagtaaccaaccatgaccgatcaccaatttaaaagaaacctgtccttttctttcaatcacaaatgcatggtcctaaatgaca 44235839  T
Q  292 ccgtcaaatttatcacgtagctaaacattgctcgtaccaagatcttttgctgtgatatatatggtccttactccttaataacttctttttatttgaattt 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44235840 ccgtcaaatttatcacgtagctaaacattgctcgtaccaagatcttttgctgtgatatatatggtccttactccttaataacttctttttatttgaattt 44235939  T
Q  392 gaaagttagaggtgtgtgtcccatcgttcggtaccacacaactttcagggaagaatacaaattagcacatggtatgtatgagaataattaaggtgttctt 491  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44235940 gaaagttagaggtgtgtgtcccatcgttcggtaccacacaactttcagggaagaatacaaattagcacatggtatgtatgagaataattaaggtgttctt 44236039  T
Q  492 ataatgattatcaaactgagtttttacgccagatatatatctcattttattgactttagtgactagtaatcatggaattggtaatatattaacttaaatc 591  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44236040 ataatgattatcaaactgagtttttacgccagatatatatctcattttattgactttagtgactagtaatcatggaattggtaatatattaacttaaatc 44236139  T
Q  592 ttgaatttgtttgtcttctaatgctccttcgatttccatttacttaagtaaatatccccactgaggg 658  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  44236140 ttgaatttgtttatcttctaatgctccttcaatttccatttacttaagtaaatatccctactgaggg 44236206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 27550351 - 27550504
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| |||| ||||  ||||||||| ||||||||||||    
T  27550351 tacacctcatgtattagggatattttggtaagttcatcttacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgt 27550450  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactcttt 195  Q
    ||||||||||||||| |||||||||||   ||||||||| ||||||||||||||    
T  27550451 atgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcttt 27550504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 12 - 196
Target Start/End: Complemental strand, 1771366 - 1771170
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||||||||||||||||||||||||||||||||            ||||||  ||||||||| ||||||||||||||||||||| ||||||||    
T  1771366 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcacaaccacattttatctt 1771267  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctttt 196  Q
     ||||||| |||| ||||| ||||||||| |||||||||||| |||||||||||||| |||||||||||   ||||||||| |||||||||||||||    
T  1771266 ctatttatgtggggtccaagttgccacgtctcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactctttt 1771170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 33703183 - 33703333
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |  ||||||||| ||||||||| ||||||||||||    
T  33703183 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgcgggatccaagttgccacgtgtcagaattttgt 33703282  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     |||||||||||||| |||||||| ||   ||||||||| |||||||||||    
T  33703283 gtgggtgtaaagggtgtattgccatatggggtggtacatgtatcatcactc 33703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 42 - 192
Target Start/End: Complemental strand, 43949859 - 43949709
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |  |||||||||  |||||||| ||||||||||||    
T  43949859 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgcgggatccaatatgccacgtgtcagaattttgt 43949760  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
    |||||| |||||||| |||||||| ||   ||||||||| |||||||||||    
T  43949759 atgggtataaagggtgtattgccaaatagggtggtacatgtatcatcactc 43949709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 55966404 - 55966251
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| |||| || | |||||||| | |||||||||| |    
T  55966404 tacatcccatgtattagggatattttggtaagttcatctcacaaccacaatttatcttctatttatgtggggtctagattgccacctgtcagaattttat 55966305  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactcttt 195  Q
     |||||||||||||| |||||||||||  |||||||||| ||||| ||||||||    
T  55966304 gtgggtgtaaagggtgtattgccacatggagtggtacatgtatcaccactcttt 55966251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 42 - 192
Target Start/End: Complemental strand, 27893900 - 27893750
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||| |||| || | |||||||| | |||||||||| |    
T  27893900 tacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttat 27893801  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     |||||||||||||| |||||||||||   ||||||||| ||||| |||||    
T  27893800 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactc 27893750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 26 - 192
Target Start/End: Complemental strand, 51512339 - 51512173
Alignment:
Q  26 gaacaccctttattcctacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgcca 125  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| | |||||||||||||||||||||| | |||| ||||  ||||||    
T  51512339 gaacaccctttattcctacaccccatgtattagagatattttggtaagttcatcttataaccacactttatcttttatttgtgtggggtccaggttgcca 51512240  T
Q  126 cgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
    ||| |||||||||||| ||||| | || | | ||||||||| |   ||||||||| |||||||||||    
T  51512239 cgtgtcagaattttgtgtgggtattaaagatgtattgccacgtggggtggtacatgtatcatcactc 51512173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 28982922 - 28982728
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc------------catgtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||||||||||||||| ||||||||            ||| ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  28982922 ggaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcacaaccgcactttatctt 28982823  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
     ||||| | |||| ||||| ||||||||| |||||||||||| ||| |||||| ||| |||||||||||   ||||||||| |||||||||||||    
T  28982822 ctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgccacatggggtggtacatgtatcatcactctt 28982728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 23036022 - 23036173
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||| || ||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||| ||||  ||||||||| ||||||||||||    
T  23036022 tacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgt 23036121  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     |||||||||||| | | |||||||||   ||||||||| ||||||||||||    
T  23036122 gtgggtgtaaaggatgtgttgccacatggggtggtacatgtatcatcactct 23036173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 35017733 - 35017924
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattccta------------caccccatgtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||||||||||||||||||||||||            |||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  35017733 ggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgtat-agggatattttggtaagttcatctcacaaccacactttatctt 35017831  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||||| | |||| ||||| ||||||||| |||||||||||| ||| |||||| | | |||||||||||   ||||||||| |||||||||||    
T  35017832 ctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaagatgtattgccacatggggtggtacatgtatcatcactc 35017924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 25051735 - 25051885
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||| ||||||||| ||||||||||||    
T  25051735 tacaccctatgtattagggatattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgt 25051834  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||| |||||| | | ||||||||| |   ||||||||| |||||||||||    
T  25051835 gtggatgtaaatgatgtattgccacgtggggtggtacatgtatcatcactc 25051885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 27864606 - 27864758
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||| |||| | || ||| |||| | |||||||||| |    
T  27864606 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttattttctatttatgtggggttcagattaccacatgtcagaattttat 27864705  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
     ||| |||||||||| |||||||||||   ||||||||| ||||| |||||||    
T  27864706 gtggatgtaaagggtgtattgccacatggggtggtacatgtatcaccactctt 27864758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 48463508 - 48463364
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||| ||||||| || ||||||| |||| | || ||| |||| | |||||||||| |    
T  48463508 tacatcccatgtattagggatattttggtaagttcatctcacaaccatactttattttctatttatgtggggttcagattaccacatgtcagaattttat 48463409  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatca 186  Q
     |||||||||||||| |||||||||||  |||||||||| |||||    
T  48463408 gtgggtgtaaagggtgtattgccacatagagtggtacatgtatca 48463364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 27316771 - 27316644
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaa-ttttg 140  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||| |||  ||||| ||||||||| |||||| |||||    
T  27316771 tacaccccatgtattaaggatattttggtaagttcatctcataaccacactttatcttctatttatttggagtccaagttgccacgtgtcagaatttttg 27316672  T
Q  141 tatgggtgtaaagggtatattgccacat 168  Q
    | ||| |||||||||| ||||| |||||    
T  27316671 tgtggatgtaaagggtgtattgtcacat 27316644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 43735790 - 43735937
Alignment:
Q  48 ccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggt 147  Q
    ||||||||||  ||||||||| |||||||||||||||| ||||||||||||| ||||| | |||||||||| ||| ||||| |||||||||| | ||| |    
T  43735790 ccatgtattagagatattttgataagttcatctcacaatcacactttatcttctatttgtgtgggatccaagttgtcacgtgtcagaattttatgtggat 43735889  T
Q  148 gtaaagggtatattgccacatttagtggtacatctatcatcactcttt 195  Q
    ||||||||| ||||||||| |   ||||||||| ||||||||||||||    
T  43735890 gtaaagggtgtattgccacgtggggtggtacatgtatcatcactcttt 43735937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 31680944 - 31681070
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |  | |||||||||| |||||||||| |    
T  31680944 tacaccccgtatattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtggggtttagattgccacgtgtcagaattttat 31681043  T
Q  142 atgggtgtaaagggtatattgccacat 168  Q
     | |||||||||||| |||||||||||    
T  31681044 gtaggtgtaaagggtgtattgccacat 31681070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 23204828 - 23204710
Alignment:
Q  50 atgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgt 149  Q
    |||||||| ||||||||| |||||||||| |||||||||||||||||||| ||||||| |||| ||||  ||||||| | |||||||||| | |||||||    
T  23204828 atgtattagggatatttttgtaagttcatgtcacaaccacactttatcttctatttatgtggggtccaggttgccacatgtcagaattttatgtgggtgt 23204729  T
Q  150 aaagggtatattgccacat 168  Q
    ||||| |||||||||||||    
T  23204728 aaaggatatattgccacat 23204710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 39631143 - 39631269
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||| | |||  || ||||| ||||||||||||    
T  39631143 tacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggttcaatatgtcacgtgtcagaattttgt 39631242  T
Q  142 atgggtgtaaagggtatattgccacat 168  Q
     |||||||||||| | ||||| |||||    
T  39631243 gtgggtgtaaaggatgtattgtcacat 39631269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 45490371 - 45490245
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||| ||||||||| ||||| ||| |||| |||||||||||||||||||||||||| ||||| || ||||||||  ||||||||| ||||||| ||||    
T  45490371 tacacctcatgtattagggatactttagtaaattcatctcacaaccacactttatcttctatttgtacgggatccaggttgccacgtgtcagaatcttgt 45490272  T
Q  142 atgggtgtaaagggtatattgccacat 168  Q
     |||||||||| | |||||||||||||    
T  45490271 gtgggtgtaaatgatatattgccacat 45490245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 43514784 - 43514594
Alignment:
Q  14 aaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctttt 101  Q
    ||||||||||||||||||||||||||||||||| ||||            |||||| || |||||||||||||||||||||||||||||| ||||||| |    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcacaaccacaccttatcttct 43514685  T
Q  102 atttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
    |||| | |||| || |  ||||||||| |||||||||| | ||| ||||||| || |||||||||||   ||||||||| |||||||||||    
T  43514684 atttgtgtggggtctaggttgccacgtgtcagaattttttgtggatgtaaagagtgtattgccacatggggtggtacatgtatcatcactc 43514594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 46412557 - 46412407
Alignment:
Q  14 aaaatgttacatgaacaccctttattcctacaccccatg--tattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgg 111  Q
    |||||||||| |||||||| |||||||||||||  |||   |||||  ||||||||||||||||| |||||||||||||||||||||| ||||||| |||    
T  46412557 aaaatgttacgtgaacaccttttattcctacacttcattattattagagatattttggtaagttcttctcacaaccacactttatcttctatttatgtgg 46412458  T
Q  112 gatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattg 162  Q
    | |  |||||||||||| |||||||||||| | | ||||||  ||||||||    
T  46412457 ggtttaaattgccacgtgtcagaattttgtgtagatgtaaaaagtatattg 46412407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 12 - 152
Target Start/End: Original strand, 12496956 - 12497108
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacac------------cccatgtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||| |||||||||||||||||||||||            |||||||||||  ||||||||||||||||||||| |||| |||||||||||||    
T  12496956 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatctt 12497055  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaa 152  Q
     ||||| | || | | ||| ||||||||| | |||||||||| ||||||||||    
T  12497056 ctatttgtgtgaggttcaatttgccacgtgttagaattttgtgtgggtgtaaa 12497108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 36004204 - 36004116
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||||||||| |||||||| || |||||||||| ||||| ||| |||||| ||| || |||||||||||| ||||| |||||    
T  36004204 ggaaaatgttacatgaataccctttaatcatacaccccatatattagggacattttgataaatttatctcacaaccatactttctcttt 36004116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 41878460 - 41878559
Alignment:
Q  54 attatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaag 153  Q
    |||| |||||||||| ||||||||||||||||||| || || |||| ||||| | |||| |||| |||| ||||| |||||||||||| | |||||||||    
T  41878460 attagggatattttgataagttcatctcacaaccaaaccttctcttctatttgtgtggggtccagattgtcacgtgtcagaattttgtgttggtgtaaag 41878559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 194
Target Start/End: Original strand, 21687067 - 21687200
Alignment:
Q  61 atattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatat 160  Q
    ||||||| |||||||||||||| ||||| |||||||||| ||||| | |||  | ||  ||||||||| |||||||||||| ||  |||||||  | |||    
T  21687067 atattttagtaagttcatctcataaccatactttatcttctatttgtctggagttcaggttgccacgtgtcagaattttgtgtgaatgtaaagaatgtat 21687166  T
Q  161 tgccacatttagtggtacatctatcatcactctt 194  Q
    ||||||||    |||||||| |||||||||||||    
T  21687167 tgccacataggttggtacatatatcatcactctt 21687200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 17619210 - 17619152
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| |||||||||||||| ||||||||||||||| ||||| |||||    
T  17619210 tacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctcttt 17619152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 41848013 - 41848139
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||||||| ||||  || ||||||| || |||||| |||||||||||||| |||| ||||| | |||| | || |||| ||| | |||||||||||     
T  41848013 tacaccccatgcattagagacattttggcaaattcatcgcacaaccacactttctcttctatttgtgtggggttcagattgtcacatgtcagaattttgc 41848112  T
Q  142 atgggtgtaaagggtatattgccacat 168  Q
     ||| ||||| |||| |||||||||||    
T  41848113 gtggatgtaaggggtgtattgccacat 41848139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 55272434 - 55272376
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| |||||||||||||| ||||||||||||||| ||||| |||||    
T  55272434 tacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctcttt 55272376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 198
Target Start/End: Original strand, 28988515 - 28988670
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||||||| | || ||| |||||| ||| ||||||||| ||||||||||| |||| ||||| | |||| ||||  ||||||  | ||||||||||||    
T  28988515 tacaccccatgcactagggacattttgataaattcatctcataaccacactttctcttctatttgtgtggggtccaggttgccatatgtcagaattttgt 28988614  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctttttt 198  Q
    ||| | |||| |||| ||||| |||||   |  |||||| ||||| |||||||||||    
T  28988615 atgag-gtaaggggtgtattgtcacatgagggtgtacatgtatcaccactctttttt 28988670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 19879996 - 19880054
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    |||||||||| ||||||||| |||||||||| |||||||||||| || ||||| |||||    
T  19879996 tacaccccatatattatggacattttggtaaattcatctcacaatcatactttctcttt 19880054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 35037047 - 35037093
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaacca 88  Q
    ||||||||||| |||| |||||||||||||| |||||||||||||||    
T  35037047 tacaccccatgcattaaggatattttggtaaattcatctcacaacca 35037093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 25051693 - 25051732
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat 51  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  25051693 ggaaaatgtcacatgaacacactttattcctacaccccat 25051732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 41327580 - 41327457
Alignment:
Q  63 attttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattg 162  Q
    |||||||||| ||||||||||| ||||||||| ||||  |||| | |||| ||||  ||||||| | | |||||||| | || |||||| |||| |||||    
T  41327580 attttggtaaattcatctcacatccacactttctcttcaatttgtgtggggtccaggttgccacatgttagaattttttgtgagtgtaaggggtgtattg 41327481  T
Q  163 ccacatttagtggtacatctatca 186  Q
    ||| ||| ||  |||||| |||||    
T  41327480 ccagattaagatgtacatgtatca 41327457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 712002 - 712060
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||| ||| |||| |||||||||||||| |||||||||||| || ||||| |||||    
T  712002 tacaccctatgcattaaggatattttggtaaattcatctcacaaacatactttctcttt 712060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 38851555 - 38851613
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||| ||||| |||||||| |||||| ||| ||||||||||||||| ||||| |||||    
T  38851555 tacactccatgcattatggacattttgataaattcatctcacaaccatactttctcttt 38851613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 48435637 - 48435579
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| ||| || ||||||| |||||||||||| || |||||||||||    
T  48435637 tacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatcttt 48435579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 711960 - 711996
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc 48  Q
    |||||||||||||||||||||||||| || |||||||    
T  711960 ggaaaatgttacatgaacaccctttaatcatacaccc 711996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 23204875 - 23204839
Alignment:
Q  15 aaatgttacatgaacaccctttattcctacaccccat 51  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccat 23204839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 28988473 - 28988501
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattc 40  Q
    |||||||||||||||||||||||||||||    
T  28988473 ggaaaatgttacatgaacaccctttattc 28988501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 1e-58; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 42849946 - 42849768
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgg 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| || ||||| | |||    
T  42849946 ggaaaatgttacatgaacaccctttattcctacaccccatgtattagggatattttgataagttcatctcacaaccacactttat-ttctatttgtgtgg 42849848  T
Q  112 gatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcact 191  Q
    | ||||| ||||||||| |||||||||||| |||||||||||||| |||||||||||   ||||||||| ||||||||||    
T  42849847 ggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcact 42849768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 197
Target Start/End: Complemental strand, 43490499 - 43490304
Alignment:
Q  14 aaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctttt 101  Q
    |||||||||||||||||||||||||||||||| |||||            |||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcataaccacactttatcttct 43490400  T
Q  102 atttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactcttttt 197  Q
    |||||| |||| |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||   ||||||||| || |||||||||||||    
T  43490399 atttatgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtagcatcactcttttt 43490304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 19047199 - 19047352
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||| |||||||||| ||| ||||||||    
T  19047199 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgt 19047298  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactcttt 195  Q
    ||||||||||||||| |||||||||||   ||||||||| ||||||||||||||    
T  19047299 atgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcttt 19047352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 42 - 192
Target Start/End: Complemental strand, 43335821 - 43335671
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||  ||||||||| ||||||||||||    
T  43335821 tacatcccatgtattagggatattttggtaagttcatctcacaactacactttatcttctatttatgtgggatccaggttgccacgtgtcagaattttgt 43335722  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||| |||||| |||||||||||||||   ||||||||| |||||||||||    
T  43335721 gtggatgtaaaaggtatattgccacatggggtggtacatgtatcatcactc 43335671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 30838674 - 30838826
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||||  ||||||||| ||||||||||||    
T  30838674 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgt 30838773  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
     | |||||||| ||| |||||||||||   ||||||||| |||||||||||||    
T  30838774 gtaggtgtaaaaggtgtattgccacatggggtggtacatgtatcatcactctt 30838826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 1750414 - 1750606
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||||||||||||||||||||||||||||||||            |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  1750414 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 1750513  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||||| | |||| |||| |||||||||| |||||||||||| || ||||||||||| | |||||||||   ||||||||  |||||||||||    
T  1750514 ctatttgtgtggggtccagattgccacgtgtcagaattttgtgtgagtgtaaagggtgtgttgccacatggggtggtacaaatatcatcactc 1750606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 16096747 - 16096940
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctaca------------ccccatgtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||||||||||||||||||||||||||            |||||||||||| |||||||||||| |||| |||||||||||||||||||||||    
T  16096747 ggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcacaaccacactttatctt 16096846  T
Q  100 ttatttatat-gggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     || |||| | ||| || || ||||||||| |||||||||||| |||||||||||||| |||||||||||   ||||||||| |||||||||||    
T  16096847 ctacttatgtgggggtctaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgatgtggtacatgtatcatcactc 16096940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 4764784 - 4764633
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||| | |||| ||||  ||||||||| ||||||||||||    
T  4764784 tacaccccatgtattataaatattttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgt 4764685  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     ||| |||||| ||| |||||||||||   ||||||||| ||||||||||||    
T  4764684 gtggatgtaaaaggtgtattgccacatgaggtggtacatgtatcatcactct 4764633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 12302353 - 12302160
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||||||||||||||| |||||||||||            |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  12302353 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 12302254  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     ||||||| |||| ||||  || ||| || |||||||||||| ||| |||||||| | |||||||||||   ||| ||||| ||||||| ||||    
T  12302253 ctatttatgtggggtccaggttaccatgtgtcagaattttgtgtggatgtaaaggatgtattgccacatggggtgatacatgtatcatcgctct 12302160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 50 - 193
Target Start/End: Complemental strand, 39149342 - 39149201
Alignment:
Q  50 atgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgt 149  Q
    ||||||||  |||||||||||||||||||| |||||| |||||||||||||||||| | |||| || ||||| |||||| ||| |||||||| |||||||    
T  39149342 atgtattagagatattttggtaagttcatcccacaactacactttatcttttatttgtgtggg-tctaaattaccacgtctcataattttgtgtgggtgt 39149244  T
Q  150 aaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
    ||| ||| |||| ||||| |  ||||||||| ||||||||||||    
T  39149243 aaaaggtgtattaccaca-tgggtggtacatgtatcatcactct 39149201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 13780793 - 13780679
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||||||  |||| |||||||||| ||| ||||||||||||||||||||| |||| ||||||| |||| ||||  ||||||| | ||||||||||||    
T  13780793 tacaccccatacattagggatattttgataaattcatctcacaaccacactttctcttctatttatgtggggtccaggttgccacatgtcagaattttgt 13780694  T
Q  142 atgggtgtaaagggt 156  Q
    || ||||||||||||    
T  13780693 ataggtgtaaagggt 13780679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 34817834 - 34817681
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||||||| | || | | |||||||||| ||||||||||||||||||||| |||| ||||| || ||||||||  ||||||| | ||||||||||||    
T  34817834 tacaccccatgcactacgcacattttggtaaattcatctcacaaccacactttctcttctatttgtacgggatccaggttgccacatgtcagaattttgt 34817735  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactcttt 195  Q
    |||||||||| |||   ||||||||||   |  |||||| ||||||||||||||    
T  34817734 atgggtgtaaggggagcattgccacatgggggtgtacatgtatcatcactcttt 34817681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 33229344 - 33229396
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacacttt 94  Q
    |||||||||||||||| |||||||||||||||||||||  |||| ||||||||    
T  33229344 tacaccccatgtattagggatattttggtaagttcatcatacaatcacacttt 33229396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 43114599 - 43114657
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| ||| |||||||||| ||||||||||||||| ||||| |||||    
T  43114599 tacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctcttt 43114657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 19047158 - 19047190
Alignment:
Q  13 gaaaatgttacatgaacaccctttattcctaca 45  Q
    |||||||||||||||||||||||||||||||||    
T  19047158 gaaaatgttacatgaacaccctttattcctaca 19047190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 4451996 - 4451950
Alignment:
Q  54 attatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    |||| |||||||||||||| ||||||||||||||| ||||| |||||    
T  4451996 attagggatattttggtaaattcatctcacaaccatactttctcttt 4451950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 11825712 - 11825654
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| ||| |||||||||| |||||||||||| || ||||| |||||    
T  11825712 tacaccccatgcattagggacattttggtaatttcatctcacaatcatactttctcttt 11825654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 12415518 - 12415460
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| ||| |||||||||| || |||||||||||| ||||| |||||    
T  12415518 tacaccccatgcattagggacattttggtaattttatctcacaaccatactttctcttt 12415460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 12427578 - 12427520
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| ||| |||||||||| || |||||||||||| ||||| |||||    
T  12427578 tacaccccatgcattagggacattttggtaattttatctcacaaccatactttctcttt 12427520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 34895799 - 34895741
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| ||| || ||||||| |||||||||||| || |||||||||||    
T  34895799 tacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatcttt 34895741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 41282032 - 41281974
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| ||| |||||| ||| ||||||||||||||| ||||| |||||    
T  41282032 tacaccccatgcattagggacattttgataatttcatctcacaaccatactttctcttt 41281974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 7070418 - 7070455
Alignment:
Q  14 aaaatgttacatgaacaccctttattcctacaccccat 51  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  7070418 aaaatgttacatgaacaccctttattcatacatcccat 7070455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 966934 - 966898
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc 48  Q
    |||||||||||||||||||||||||| || |||||||    
T  966934 ggaaaatgttacatgaacaccctttaatcatacaccc 966898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 4764826 - 4764790
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc 48  Q
    |||||||||||||| |||||| |||||||||||||||    
T  4764826 ggaaaatgttacatcaacaccatttattcctacaccc 4764790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 16803968 - 16804004
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc 48  Q
    |||||||||||||||||||||||||| || |||||||    
T  16803968 ggaaaatgttacatgaacaccctttaatcatacaccc 16804004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 16843250 - 16843286
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc 48  Q
    |||||||||||||||||||||||||| || |||||||    
T  16843250 ggaaaatgttacatgaacaccctttaatcatacaccc 16843286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 18491705 - 18491741
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc 48  Q
    |||||||||||||||||||||||||| || |||||||    
T  18491705 ggaaaatgttacatgaacaccctttaatcatacaccc 18491741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 29739406 - 29739358
Alignment:
Q  146 gtgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
    ||||||||||||||||||||||| |  |||||||| |||||| ||||||    
T  29739406 gtgtaaagggtatattgccacatatgatggtacatgtatcattactctt 29739358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 43114557 - 43114593
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc 48  Q
    |||||||||||||||||||||||||| || |||||||    
T  43114557 ggaaaatgttacatgaacaccctttaatcatacaccc 43114593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 1e-52; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 52629840 - 52630021
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgg 111  Q
    ||||||| ||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||| | |    
T  52629840 ggaaaatattacatgaacaccttttattcctacaccctatgtattaaggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtag 52629939  T
Q  112 gatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
    | ||||  |||| |||| |||||||||||| |||||||||||||| |||||||||||   ||||||||| ||||||||||||    
T  52629940 ggtccaggttgctacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactct 52630021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 13 - 195
Target Start/End: Complemental strand, 42394518 - 42394324
Alignment:
Q  13 gaaaatgttacatgaacaccctttattcc------------tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    |||||||||||||||||||||||||||||            ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||     
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttc 42394419  T
Q  101 tatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactcttt 195  Q
    ||||| | |||| |||| |||||||||| ||| ||||||||||||||||||||||| |||||||||||   ||||||||| ||||||||||||||    
T  42394418 tatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcttt 42394324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 54237138 - 54237288
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||| |||||||||| ||||||| ||||    
T  54237138 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaatattgt 54237237  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
    ||||||||||||||| |||||||||||   ||||||||| |||||||||||    
T  54237238 atgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 54237288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 46941053 - 46941246
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctaca------------ccccatgtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||||||||||||||||||||||||||            |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  46941053 ggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 46941152  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     ||||| | |||| ||||| ||||||||| |||||||||| | ||||||||||| || |||||||||||   ||||||||| ||||||||||||    
T  46941153 ctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagagtgtattgccacatggggtggtacatgtatcatcactct 46941246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 12 - 195
Target Start/End: Complemental strand, 47191125 - 47190931
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacacc-----------ccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||||||||||||||||||||||||||||           ||||||||||  ||||||||| ||||||||||||||||||||||||||||||     
T  47191125 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacccatgtattagagatattttgataagttcatctcacaaccacactttatcttc 47191026  T
Q  101 tatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactcttt 195  Q
    ||||| | |||| ||||| || |||| | |||||||||||| |||||||||||||| |||||||||||  | |||||||| ||||||||||||||    
T  47191025 tatttgtgtggggtccaagttaccacatgtcagaattttgtgtgggtgtaaagggtgtattgccacatggaatggtacatgtatcatcactcttt 47190931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 42 - 192
Target Start/End: Complemental strand, 24688460 - 24688310
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||  ||||||||| ||||||||||||    
T  24688460 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgt 24688361  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     |||| ||||| ||| |||||||||||   ||||||||| |||||||||||    
T  24688360 gtgggggtaaatggtgtattgccacatggggtggtacatgtatcatcactc 24688310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 40808907 - 40809057
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||||  ||||||||| ||||||||||||    
T  40808907 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgt 40809006  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||| |||||| ||| |||||||||||   ||||||||| |||||||||||    
T  40809007 gtggatgtaaaaggtgtattgccacatggggtggtacatgtatcatcactc 40809057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 42 - 192
Target Start/End: Complemental strand, 45126986 - 45126836
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||| |||| |||| ||| |||| |  ||||||||| |    
T  45126986 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttattttctatttatgtggggtccagattaccacatgccagaattttat 45126887  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     |||||||||||||| |||||||||||  |||||||||| ||||| |||||    
T  45126886 gtgggtgtaaagggtgtattgccacatggagtggtacatgtatcaccactc 45126836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 53581908 - 53581766
Alignment:
Q  50 atgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgt 149  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||| ||||| | |||| ||||  ||||||||| |||||||||||| |||||||    
T  53581908 atgtattagggatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtgt 53581809  T
Q  150 aaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
    ||||||| |||||||||||   ||||||||  |||||||||||    
T  53581808 aaagggtgtattgccacatagggtggtacaggtatcatcactc 53581766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 36150172 - 36150325
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||| ||||| | |||  ||||  ||||||||| ||||||||||||    
T  36150172 tacaccctatgtatcagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggagtccaggttgccacgtgtcagaattttgt 36150271  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactcttt 195  Q
     ||| |||||||||| |||||||||||   ||||||||| ||||| ||||||||    
T  36150272 gtggatgtaaagggtgtattgccacatggggtggtacatgtatcaccactcttt 36150325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 25413681 - 25413874
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||||||||||||||||||||||||||||||||            |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  25413681 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 25413780  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     ||||| | |||| ||||  || |||||| ||||| |||||| |||||||||||||| ||||| || ||   ||||||||| ||||||||||||    
T  25413781 ctatttgtgtggggtccaggttaccacgtgtcagagttttgtgtgggtgtaaagggtgtattgtcatatggggtggtacatgtatcatcactct 25413874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 42100688 - 42100880
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctaca------------ccccatgtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||||||||||||||||||||||||||            |||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  42100688 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacattttatctt 42100787  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
    |||||| | |||  | ||  ||||||||| |||||||||| | ||||||||||||||  ||||||||||   ||||||||| ||| |||||||    
T  42100788 ttatttgtgtggagttcaggttgccacgtgtcagaattttatgtgggtgtaaagggtgcattgccacatgaggtggtacatgtatgatcactc 42100880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 40480799 - 40480941
Alignment:
Q  50 atgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgt 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | | || ||||  ||||||||| |||||||||||| |||||||    
T  40480799 atgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtagggtccaggttgccacgtgtcagaattttgtgtgggtgt 40480898  T
Q  150 aaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
    ||||||| ||||||| |||   ||| ||||| |||||||||||    
T  40480899 aaagggtgtattgccgcatggggtgatacatgtatcatcactc 40480941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 54246248 - 54246054
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||||||||||||||||||||||||||||||||            ||||||  |||||||| |||||||||||||||||||||||||||||||    
T  54246248 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcacaaccacactttatctt 54246149  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
     ||||| | |||| ||||  ||||||| | |||||||||| | |||||||||||  | |||||||||||   ||||||||| |||||||||||||    
T  54246148 ctatttgtgtggggtccaggttgccacatgtcagaattttatgtgggtgtaaagaatgtattgccacatggggtggtacatgtatcatcactctt 54246054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 53273742 - 53273634
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||  || |||||||||||||||||||    
T  53273742 tacatcccatgtattagggatattttggtaagttcatctcacaaccatactttatcttttatttatgtgggatccaggttaccacgtatcagaattttgt 53273643  T
Q  142 atgggtgta 150  Q
     | ||||||    
T  53273642 gtaggtgta 53273634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 51249350 - 51249452
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||| |||| |||| |||||||||||||| ||||||||||||||||||||| |||| ||||| | ||||||||| |||||||| | ||||||||||||    
T  51249350 tacacctcatgcattaaggatattttggtaaattcatctcacaaccacactttctcttctatttgtgtgggatccagattgccacatgtcagaattttgt 51249449  T
Q  142 atg 144  Q
    |||    
T  51249450 atg 51249452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 27748613 - 27748713
Alignment:
Q  50 atgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgt 149  Q
    |||||||| |||||||||||||||||||||||||||| | |||||||||| ||||| | |||| ||||  ||||||| | |||||||||||| | |||||    
T  27748613 atgtattagggatattttggtaagttcatctcacaacaatactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttgtgtcggtgt 27748712  T
Q  150 a 150  Q
    |    
T  27748713 a 27748713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 1078338 - 1078412
Alignment:
Q  120 ttgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
    ||||||||| |||||||||||| ||| |||||||||| |||||||||||   ||||||||| |||||||||||||    
T  1078338 ttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatgaggtggtacatgtatcatcactctt 1078412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 9434166 - 9434224
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| ||| |||||||||| ||||||||||||||| ||||| |||||    
T  9434166 tacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctcttt 9434224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 10457950 - 10457892
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| |||||||||||||| || |||||||||||| ||||| |||||    
T  10457950 tacaccccatgcattaaggatattttggtaaatttatctcacaaccatactttctcttt 10457892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 29556924 - 29556864
Alignment:
Q  135 attttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactcttt 195  Q
    ||||| ||||||||||||  || ||||||||||| ||||||||||| ||||| ||||||||    
T  29556924 attttatatgggtgtaaattgtgtattgccacatgtagtggtacatgtatcaccactcttt 29556864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 54237097 - 54237129
Alignment:
Q  13 gaaaatgttacatgaacaccctttattcctaca 45  Q
    |||||||||||||||||||||||||||||||||    
T  54237097 gaaaatgttacatgaacaccctttattcctaca 54237129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 36150130 - 36150169
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat 51  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  36150130 ggaaaatgttacatgaataccctttattcatacaccccat 36150169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 4190315 - 4190265
Alignment:
Q  50 atgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||  ||||||||||||| ||||||||||||||| ||||| |||||    
T  4190315 atgtattagagatattttggtaaattcatctcacaaccatactttctcttt 4190265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 25996310 - 25996356
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaacca 88  Q
    |||||||||| ||||| ||| |||||||||| |||||||||||||||    
T  25996310 tacaccccatatattaaggacattttggtaaattcatctcacaacca 25996356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 51757635 - 51757693
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    |||||| |||| |||||||| ||||| |||| ||||||||||||||| ||||| |||||    
T  51757635 tacacctcatgcattatggacattttagtaatttcatctcacaaccatactttctcttt 51757693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 4190365 - 4190329
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc 48  Q
    |||||||||||||||||||||||||| || |||||||    
T  4190365 ggaaaatgttacatgaacaccctttaatcatacaccc 4190329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 1e-52; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 4888055 - 4888235
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgg 111  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||| | |||    
T  4888055 ggaaaatgttacatgaacgccctttattcctacatcccatgtattagggatattttggtaagtttatctcacaaccacactttattttctatttgtgtgg 4888154  T
Q  112 gatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
      |||||||||||| ||||||||||||||| ||| |||||||| |||||||||||| |  ||||||||| ||||||||||||    
T  4888155 tgtccaaattgccatgtatcagaattttgtgtggatgtaaaggatatattgccaca-tgggtggtacatgtatcatcactct 4888235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 43571186 - 43570994
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacacc------------ccatgtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||||||||||||||||||||||||||||            |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43571186 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 43571087  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||||| | |||| ||||| ||||||||| |||||||||| | |||||||||||||| |||||||||||   ||||||||| |||||||||||    
T  43571086 ctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatatatcatcactc 43570994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 42 - 198
Target Start/End: Complemental strand, 48499020 - 48498864
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||||| ||||||||| |||||||||| |    
T  48499020 tacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttat 48498921  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctttttt 198  Q
     |||||||||||||| |||||||||||   ||||||||| ||||||||||| |||||    
T  48498920 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcattttt 48498864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 4401370 - 4401521
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||||  |||||||| ||||||||||||    
T  4401370 tacaccccatgtattagagatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaatatgccacgtgtcagaattttgt 4401469  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     |||||||||||||| |||||||||||   ||||||||| ||||||||||||    
T  4401470 gtgggtgtaaagggtgtattgccacatagggtggtacatgtatcatcactct 4401521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 5489776 - 5489968
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||||||||||||||||||||| |||||            |||||| |||||||||||||||||||||||||||||||||||||||||    
T  5489776 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5489875  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||||| | |||| ||||| ||||||||| |||||||||| | |||||||||||||| |||||||||||   ||||||||| |||||||||||    
T  5489876 ctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 5489968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 47 - 198
Target Start/End: Original strand, 7447872 - 7448023
Alignment:
Q  47 cccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatggg 146  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||||||||| ||||| | |||| ||||| ||||||||| |||||||||||| ||||    
T  7447872 cccatgtattacagatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggg 7447971  T
Q  147 tgtaaagggtatattgccacatttagtggtacatctatcatcactctttttt 198  Q
    |||||||||| |||||||||||  | |||||||| |||||||||||||||||    
T  7447972 tgtaaagggtgtattgccacatggaatggtacatgtatcatcactctttttt 7448023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 42 - 191
Target Start/End: Original strand, 37814820 - 37814969
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||| |||| |||| |||||||||| |||||||||| |    
T  37814820 tacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatcttctatttatgtggggtccagattgccacgtgtcagaattttat 37814919  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcact 191  Q
    |||| |||||||||| |||||||||||   ||||||||| ||||| ||||    
T  37814920 atggatgtaaagggtgtattgccacatggggtggtacatgtatcaccact 37814969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 24769557 - 24769405
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||| ||||| | |||| ||||| ||||||||| ||||||||||||    
T  24769557 tacaccccatgtattagggatattttggtaagttcttatcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgt 24769458  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
     ||| ||||||| || |||||||||||   ||||||||| |||||||||||||    
T  24769457 gtggatgtaaagagtgtattgccacatggggtggtacatgtatcatcactctt 24769405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 2497620 - 2497469
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||| |||| ||||| |||||||||| |    
T  2497620 tacaccccatatattaaggatattttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgtcacgtgtcagaattttat 2497521  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     ||||| |||||||| |||||||||||   ||||||||| ||||| ||||||    
T  2497520 gtgggtataaagggtgtattgccacatggtgtggtacatgtatcaccactct 2497469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 50 - 193
Target Start/End: Complemental strand, 50448310 - 50448167
Alignment:
Q  50 atgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgt 149  Q
    |||||||| ||||||||| |||||||||||| ||||||||| |||||||| ||||| | |||| ||||  ||||||||| |||||||||||| |||||||    
T  50448310 atgtattagggatatttttgtaagttcatcttacaaccacattttatcttctatttttgtgggttccatgttgccacgtgtcagaattttgtgtgggtgt 50448211  T
Q  150 aaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
    ||||||| |||||||||||   ||||||||| ||||||||||||    
T  50448210 aaagggtgtattgccacatggggtggtacatgtatcatcactct 50448167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 750363 - 750209
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||| | |||||||||| ||| ||||||||| |||||||||||||||| ||||| | |||| ||||  || |||||| ||||||||||||    
T  750363 tacaccccatgtatcagggatattttgataaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttaccacgtgtcagaattttgt 750264  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctttt 196  Q
     |||||||||||||| |||||||||||    |||||||| |||||||||||||||    
T  750263 gtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactctttt 750209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 45 - 192
Target Start/End: Complemental strand, 23989578 - 23989431
Alignment:
Q  45 accccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatg 144  Q
    |||| |||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| | |||| ||||  ||||||| | ||||||| |||| ||    
T  23989578 accctatgtattagggatattttggtaaatttatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaatcttgtgtg 23989479  T
Q  145 ggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
    |||||||||||| |||||||| ||   ||||||||| ||||| |||||    
T  23989478 ggtgtaaagggtgtattgccatatagggtggtacatgtatcaccactc 23989431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 48119670 - 48119728
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| |||||||||||||| ||||||||||||||| ||||| |||||    
T  48119670 tacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctcttt 48119728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 35003336 - 35003394
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||  |||| |||||||||||||| ||||||||||||||| ||||| |||||    
T  35003336 tacaccccatacattaaggatattttggtaaattcatctcacaaccatactttctcttt 35003394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 38335960 - 38336018
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    |||| |||||| |||| |||||||||||||| ||||||||||||||| ||||| |||||    
T  38335960 tacatcccatgcattaaggatattttggtaaattcatctcacaaccatactttctcttt 38336018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 44112719 - 44112777
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| ||| |||||||||| ||||||||||||||| ||||| |||||    
T  44112719 tacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctcttt 44112777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 46168425 - 46168483
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||| ||| |||| |||||||||||||| ||||||||||||||| ||||| |||||    
T  46168425 tacacccaatgcattaaggatattttggtaaattcatctcacaaccatactttctcttt 46168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 41065195 - 41065253
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| ||  |||||||||| ||||||||||||||| ||||| |||||    
T  41065195 tacaccccatgcattaggggcattttggtaatttcatctcacaaccatactttctcttt 41065253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 45427803 - 45427745
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||| ||||| |||| ||| |||||||||| ||||||||||||||| ||||| |||||    
T  45427803 tacactccatgcattagggacattttggtaatttcatctcacaaccatactttctcttt 45427745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 45639790 - 45639732
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||  |||| |||||||||||||| |||||||||||| || ||||| |||||    
T  45639790 tacaccccatacattaaggatattttggtaaattcatctcacaatcatactttctcttt 45639732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 45705867 - 45705925
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||| ||||| |||||||| |||||| ||| ||||||||||||||| ||||| |||||    
T  45705867 tacactccatgcattatggacattttgataaattcatctcacaaccatactttctcttt 45705925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 14427347 - 14427383
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc 48  Q
    |||||||||||||||||||||||||| || |||||||    
T  14427347 ggaaaatgttacatgaacaccctttaatcatacaccc 14427383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 35003294 - 35003330
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc 48  Q
    |||||||||||||||||||||||||| || |||||||    
T  35003294 ggaaaatgttacatgaacaccctttaatcatacaccc 35003330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 41065153 - 41065189
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc 48  Q
    |||||||||||||||||||||||||| || |||||||    
T  41065153 ggaaaatgttacatgaacaccctttaatcatacaccc 41065189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 44112677 - 44112713
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc 48  Q
    |||||||||||||||||||||||||| || |||||||    
T  44112677 ggaaaatgttacatgaacaccctttaatcatacaccc 44112713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 1e-49; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 9241564 - 9241744
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgg 111  Q
    ||||||||||||||||||  ||||||||||||||||| || ||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||    
T  9241564 ggaaaatgttacatgaacctcctttattcctacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtgg 9241663  T
Q  112 gatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
    | ||||  ||||||||| |||||||||||| |||||| ||||||| | |||||||||   ||||||||| |||||||||||    
T  9241664 ggtccaggttgccacgtgtcagaattttgtgtgggtgcaaagggtgtgttgccacatggggtggtacatgtatcatcactc 9241744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 11582766 - 11582959
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||||||||||||||||||||| |||||            |||||| |||||||||||||||||||||||||||||||||||||||||    
T  11582766 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 11582865  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     ||||| | |||| |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||   ||||||||| |||||| |||||    
T  11582866 ctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactct 11582959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 36743583 - 36743390
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||||||||||||||||||||| |||||            |||||| |||||||||||||||||||||||||||||||||||||||||    
T  36743583 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 36743484  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     ||||| | |||| |||| |||||||||| ||||||||||||||||||||||| ||| |||||||||||   ||||||||| ||||||||||||    
T  36743483 ctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactct 36743390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 2547038 - 2547188
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| | |||||||||| ||||||||| ||||||||||||    
T  2547038 tacacctcatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttgt 2547137  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     |||||||||||||| |||||||||||   ||||||||| |||||||||||    
T  2547138 gtgggtgtaaagggtgtattgccacatagggtggtacatgtatcatcactc 2547188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 42 - 196
Target Start/End: Original strand, 20148802 - 20148956
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||| |||||||||| |||||||||| |    
T  20148802 tacacctcatatattagggatattttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgccacgtgtcagaattttat 20148901  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctttt 196  Q
     |||||||||||||| |||||||||||   ||||||||| ||||| |||||||||    
T  20148902 gtgggtgtaaagggtgtattgccacatggtgtggtacatgtatcaccactctttt 20148956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 42197535 - 42197344
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||||||||||||| ||||||||||||||||||            |||||| |||||||||||||||||||||||||||||||||||||||||    
T  42197535 ggaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42197436  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcact 191  Q
     ||||| | |||| |||| |||||||||| ||| |||||||| |||||||||||||| |||||||||||   ||||||||| ||||||||||    
T  42197435 ctatttgtgtggggtccagattgccacgtgtcaaaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcact 42197344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 42295197 - 42295386
Alignment:
Q  14 aaaatgttacatgaacaccctttattcctacacc------------ccatgtattatggatattttggtaagttcatctcacaaccacactttatctttt 101  Q
    ||||||||||||||||||||||||||||||||||            |||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatcttct 42295296  T
Q  102 atttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
    |||||| |||| ||||| ||||||| | |||||||||||| ||| ||||||||||||||||||||||    |||||||| |||||||||||    
T  42295297 atttatgtggg-tccaagttgccacatgtcagaattttgtgtggatgtaaagggtatattgccacataggatggtacatttatcatcactc 42295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 29705404 - 29705549
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||| |  ||| ||||| ||||||||| ||||||||||||    
T  29705404 tacaccccatgtattagggatattttgataagttcatctcacaaccacactttatcttctatttgtgcggggtccaagttgccacgtgtcagaattttgt 29705503  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcat 187  Q
     |||||||||||||| |||||||||||   ||||||||| ||||||    
T  29705504 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatcat 29705549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 29801008 - 29800864
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| || | |||||||| | |||||||||| |    
T  29801008 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttat 29800909  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatca 186  Q
     |||||||||||||| |||||||||||   ||||||||| |||||    
T  29800908 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatca 29800864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 42 - 164
Target Start/End: Original strand, 5754945 - 5755067
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||| | ||||||||||    
T  5754945 tacatcccatatattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtgggatccaagttgccacgtgttagaattttgt 5755044  T
Q  142 atgggtgtaaagggtatattgcc 164  Q
     |||||||||||||| |||||||    
T  5755045 gtgggtgtaaagggtgtattgcc 5755067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 31384706 - 31384856
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||||  |||| |||| |||||||||| |    
T  31384706 tacaccccatgtattaggaatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgctacgtgtcagaattttat 31384805  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||| ||||||||||||||||||||||   ||||||||| |||||||||||    
T  31384806 gtggatgtaaagggtatattgccacatggggtggtacatatatcatcactc 31384856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 42 - 191
Target Start/End: Original strand, 26125677 - 26125825
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||| |||||||||| |||||||||| |    
T  26125677 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtggg-tccagattgccacgtgtcagaattttat 26125775  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcact 191  Q
      ||||||||||||| |||||||||||   ||||||||| ||||| ||||    
T  26125776 gcgggtgtaaagggtgtattgccacatggggtggtacatatatcaccact 26125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 45397357 - 45397508
Alignment:
Q  41 ctacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttg 140  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||||||| |||||||| ||||| | |||| |||| |||||||||| |||||||||||    
T  45397357 ctacaccctatgtattagggatatttttgtaagttcatctcacaaccacaatttatcttctatttgtgtgggctccagattgccacgtgtcagaattttg 45397456  T
Q  141 tatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
    | |||||||||||||| | |||||||| |  ||||||||| ||||||||||||    
T  45397457 tgtgggtgtaaagggtgtgttgccaca-tgggtggtacatgtatcatcactct 45397508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 30912660 - 30912464
Alignment:
Q  14 aaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctttt 101  Q
    ||||||||||||||||||||||||||||||||||||||            |||||| || |||||||||||||||||||||||||| ||| ||||||| |    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcacaaccgcaccttatcttct 30912561  T
Q  102 atttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctttttt 198  Q
    |||| | |||| || |  ||||||||| |||||||||||| ||||||||||| || |||||||||||   ||||||||| |||||||||||||||||    
T  30912560 atttgtgtggggtctaggttgccacgtgtcagaattttgtgtgggtgtaaagagtgtattgccacatggggtggtacatgtatcatcactctttttt 30912464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 3743813 - 3743963
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||| ||||||| | || | || |||||||||| |||||||||| |    
T  3743813 tacaccccatatattaagtatattttgataagttcatctcacaaccacactttatcttctatttatgtagggttcagattgccacgtgtcagaattttat 3743912  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     |||||||||||||| |||||| ||||   ||||||||| |||||||||||    
T  3743913 gtgggtgtaaagggtgtattgctacatggggtggtacatatatcatcactc 3743963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 30660800 - 30660648
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||| ||||| | |||| ||||  ||||||||| |||||||||| |    
T  30660800 tacaccctatgtattagggatattttggtaagttcatcttacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttat 30660701  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
     ||| |||||||||| |||||||||||    || ||||| |||||||||||||    
T  30660700 gtggatgtaaagggtgtattgccacataggatgatacatgtatcatcactctt 30660648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 45 - 168
Target Start/End: Complemental strand, 2166018 - 2165895
Alignment:
Q  45 accccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatg 144  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||||||||||| ||||| | |||| | ||  ||||||||| |||||||||||| ||    
T  2166018 accccatgtattagagatattttggtaagttcatctcataaccacactttatcttctatttgtgtggggttcaggttgccacgtgtcagaattttgtgtg 2165919  T
Q  145 ggtgtaaagggtatattgccacat 168  Q
    |||||||||||| ||||| |||||    
T  2165918 ggtgtaaagggtgtattgtcacat 2165895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 1375584 - 1375737
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||| ||||| |||||||||||||| || |||||||||| |||||||||||| ||||| | |||  | || |||||||||| | ||||| ||||    
T  1375584 tacaccccatatattagggatattttggtaaatttatctcacaactacactttatcttctatttgtgtggagttcagattgccacgtgttagaatcttgt 1375683  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactcttt 195  Q
     |||||||||||  | ||||| |||||   ||||||||| ||||| ||||||||    
T  1375684 gtgggtgtaaagaatgtattgtcacatagggtggtacatgtatcaccactcttt 1375737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 10678240 - 10678152
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||||||||| |||||||| || |||||||||| ||||| ||| |||||||||| ||||||||||||||| ||||| |||||    
T  10678240 ggaaaatgttacatgaataccctttaatcatacaccccatatattaaggacattttggtaaattcatctcacaaccatactttctcttt 10678152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 42699259 - 42699353
Alignment:
Q  14 aaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttat 96  Q
    ||||||||||||||||||||||||||||||||||||||            |||||||||||||||| ||||||||||||||||||||||||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcacaaccacactttat 42699353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 40528692 - 40528566
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||| ||||| ||| |||||| ||| || |||||||||||||||||| |||| ||||| | |||| | ||| ||| ||| | ||| ||||||||    
T  40528692 tacaccccatatattagggacattttgataaatttatctcacaaccacactttctcttctatttgtgtggggttcaagttgtcacatgtcataattttgt 40528593  T
Q  142 atgggtgtaaagggtatattgccacat 168  Q
     ||| |||||| | ||||||| |||||    
T  40528592 gtggatgtaaatgatatattgtcacat 40528566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 47
Target Start/End: Original strand, 28977146 - 28977181
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacacc 47  Q
    ||||||||||||||||||||||||||||||||||||    
T  28977146 ggaaaatgttacatgaacaccctttattcctacacc 28977181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 18066776 - 18066718
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    |||| ||||||||||| ||||||||| |||| ||||||||||||||| ||||| |||||    
T  18066776 tacatcccatgtattagggatattttagtaatttcatctcacaaccatactttctcttt 18066718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 34304830 - 34304888
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| ||| |||||||||| ||||||||||||||| ||||| |||||    
T  34304830 tacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctcttt 34304888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 35181558 - 35181616
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| ||| |||||||||| ||||||||||||||| ||||| |||||    
T  35181558 tacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctcttt 35181616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 45397317 - 45397355
Alignment:
Q  13 gaaaatgttacatgaacaccctttattcctacaccccat 51  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  45397317 gaaaatgttacgtgaacaccctttattcctacaccccat 45397355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 2166063 - 2166024
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat 51  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  2166063 ggaaaatattacatgaacaccatttattcctacaccccat 2166024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 19386670 - 19386634
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc 48  Q
    |||||||||||||||||||||||||| || |||||||    
T  19386670 ggaaaatgttacatgaacaccctttaatcatacaccc 19386634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 35181516 - 35181552
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccc 48  Q
    |||||||||||||||||||||||||| || |||||||    
T  35181516 ggaaaatgttacatgaacaccctttaatcatacaccc 35181552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 98; Significance: 6e-48; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 112697 - 112850
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||| |||||||||| ||| ||||||||    
T  112697 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgt 112796  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactcttt 195  Q
    ||||||||||||||| |||||||||||   ||||||||| ||||||||||||||    
T  112797 atgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcttt 112850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 112656 - 112688
Alignment:
Q  13 gaaaatgttacatgaacaccctttattcctaca 45  Q
    |||||||||||||||||||||||||||||||||    
T  112656 gaaaatgttacatgaacaccctttattcctaca 112688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 6e-48; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 9698433 - 9698239
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||||||||||||||||||||| |||||            |||||| |||||||||||||||||||||||||||||||||||||||||    
T  9698433 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 9698334  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
     ||||| | |||| |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||   ||||||||| |||||| ||||||    
T  9698333 ctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactctt 9698239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 42 - 198
Target Start/End: Original strand, 7367591 - 7367747
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||  ||||||||| ||||||||||||    
T  7367591 tacatcccatgtattagggatattttggtaagttcatctcacaaccacactttattttctatttatgtgggatccaggttgccacgtgtcagaattttgt 7367690  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctttttt 198  Q
     |||||||||||||| |||||||||||   ||||||||| |||||||| ||||||||    
T  7367691 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcattctttttt 7367747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 21279976 - 21280123
Alignment:
Q  47 cccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatggg 146  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| | |||| ||||| ||||||||| |||||||||||| ||||    
T  21279976 cccatgtattagggatattttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggg 21280075  T
Q  147 tgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
    ||||||||||||||||||||||   ||||||||| |||||||||||||    
T  21280076 tgtaaagggtatattgccacatggggtggtacatgtatcatcactctt 21280123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 21293735 - 21293584
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||| |||| |||| |||||||||| |||||||||| |    
T  21293735 tacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatcttctatttatgtggggtccagattgccacgtgtcagaattttat 21293636  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     |||||||||||||| |||||||||||   ||||||||| ||||| ||||||    
T  21293635 gtgggtgtaaagggtgtattgccacatgaggtggtacatgtatcaccactct 21293584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 42 - 192
Target Start/End: Complemental strand, 24204045 - 24203895
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| | |||| ||||| ||||||||| ||||||||||||    
T  24204045 tacactccatgtattagggatattttggtaagttcatctcacaaccacactttatattctatttgtgtggggtccaagttgccacgtgtcagaattttgt 24203946  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||| |||||||||| ||||| |||||  |||||||||| |||||||||||    
T  24203945 gtggatgtaaagggtgtattgtcacatggagtggtacatgtatcatcactc 24203895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 7273435 - 7273241
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacacc------------ccatgtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||||||||||||||||||||||||||||            ||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  7273435 ggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcacaatcacactttatctt 7273336  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
     ||||||| |||| ||||| ||||||||| |||||||||||| ||||||||||| || |||| ||||||   |||||||||  ||||||||||||    
T  7273335 ctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagagtgtattaccacatggggtggtacatgcatcatcactctt 7273241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 42 - 191
Target Start/End: Complemental strand, 13743279 - 13743130
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||||  ||||||||| ||||||| ||||    
T  13743279 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaatcttgt 13743180  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcact 191  Q
     |||||||||||| |||||||||||||   ||||||||| ||||| ||||    
T  13743179 gtgggtgtaaaggatatattgccacatagggtggtacatgtatcaccact 13743130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 42 - 191
Target Start/End: Complemental strand, 13748779 - 13748630
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||||  ||||||||| ||||||| ||||    
T  13748779 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaatcttgt 13748680  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcact 191  Q
     |||||||||||| |||||||||||||   ||||||||| ||||| ||||    
T  13748679 gtgggtgtaaaggatatattgccacatagggtggtacatgtatcaccact 13748630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 12 - 198
Target Start/End: Original strand, 30014343 - 30014541
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacacccca------------tgtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||||||||||||||||||||| ||||            ||||||| | |||||||||||||||||||||||||||| ||||||||||    
T  30014343 ggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcacaaccatactttatctt 30014442  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctttttt 198  Q
     |||||||||||| ||||| || |||||| |||||||||||| ||| |||||||||| |||||||||||   ||| ||||| |||||||||| ||||||    
T  30014443 ctatttatatggggtccaagttaccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtgatacatgtatcatcactttttttt 30014541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 3213442 - 3213594
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||| ||||||| |||| |||| |||||||||| |||||||||| |    
T  3213442 tacaccccatgtattaaggatattttggtaaattcatttcacaaccatactttatcttctatttatgtggggtccagattgccacgtgtcagaattttat 3213541  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
     |||||||||||||| |||||||||||   ||||||||| ||||| |||||||    
T  3213542 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactctt 3213594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 12 - 196
Target Start/End: Complemental strand, 26670109 - 26669913
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||||||||||||||||||||||| |||            |||||| |||||||||||||||||||||||||||||||||||||||||    
T  26670109 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 26670010  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctttt 196  Q
     ||||| | |||  ||||  ||||||||| |||||||||||| |||||||||||||| |||||||||||   ||||||||| ||||| | |||||||    
T  26670009 ctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgaggtggtacatatatcaccgctctttt 26669913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 12 - 194
Target Start/End: Original strand, 26466799 - 26466993
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||| |||||||||||||||||||||||||            |||||| || ||||||||||||||||||||||||||||||||||||||    
T  26466799 ggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcacaaccacactttatctt 26466898  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
     ||||| | |||| | ||  |||||||||||||| |||||||||||||||||| ||| |||||||||||   |||||| || |||||||||||||    
T  26466899 ctatttgtttggggttcaggttgccacgtatcaggattttgtatgggtgtaaaaggtgtattgccacatagggtggtaaatgtatcatcactctt 26466993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 7292789 - 7292933
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||||  ||||||||| ||||||||||||    
T  7292789 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgt 7292888  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatca 186  Q
     || ||||||||||| |||||||||||   ||||||||| |||||    
T  7292889 ttgtgtgtaaagggtgtattgccacatggggtggtacatgtatca 7292933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 30736024 - 30736174
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||| |||||||||  |||||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||  ||||||||| ||||||||||||    
T  30736024 tacacctcatgtattagtgatattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgt 30736123  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||| |||||||||| |||||||||||    |||||||| |||||||||||    
T  30736124 gtggatgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 30736174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 27441592 - 27441642
Alignment:
Q  50 atgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    |||||||| |||||||||||||| ||||||||||||||| ||||| |||||    
T  27441592 atgtattaaggatattttggtaaattcatctcacaaccatactttctcttt 27441642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 33242445 - 33242503
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    |||||||||||||||| ||| |||||||||| |||||||||||| || ||||| |||||    
T  33242445 tacaccccatgtattaaggacattttggtaaattcatctcacaaacatactttctcttt 33242503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 33253955 - 33254014
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatctttt 101  Q
    ||||||||||| |||| ||| || ||||||| |||||||||||| || ||||||||||||    
T  33253955 tacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctttt 33254014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 24204085 - 24204051
Alignment:
Q  14 aaaatgttacatgaacaccctttattcctacaccc 48  Q
    ||||||||||||||||||| |||||||||||||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccc 24204051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 2e-47; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 24001112 - 24000919
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||||||||||||||||||||| |||||            |||||| |||||||||||||||||||||||||||||||||||||||||    
T  24001112 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24001013  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     ||||| | |||| |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||   ||||||||| |||||| |||||    
T  24001012 ctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactct 24000919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 42538531 - 42538339
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||||||||||||||||||||| |||||            |||||| |||||||||||||||||||||||||||||||||||||||||    
T  42538531 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42538432  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||||| | |||| |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||   ||||||||| |||||| ||||    
T  42538431 ctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactc 42538339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 42 - 192
Target Start/End: Complemental strand, 32029875 - 32029725
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||| |||| ||||| ||||||||| ||||||||||||    
T  32029875 tacaccccatgtattagggatattttggtaaattcatctaacaaccacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgt 32029776  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     |||||||||||||| |||||||||||   ||||||||| |||||| ||||    
T  32029775 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatgactc 32029725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 42 - 196
Target Start/End: Original strand, 44326220 - 44326374
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||| |||||||||| |||||||||| |    
T  44326220 tacacctcatatattagggatattttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgccacgtgtcagaattttat 44326319  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctttt 196  Q
     |||||||||||||| |||||||||||   ||||||||| ||||| |||||||||    
T  44326320 gtgggtgtaaagggtgtattgccacatggtgtggtacatgtatcaccactctttt 44326374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 12 - 198
Target Start/End: Complemental strand, 5811024 - 5810826
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccatg------------tattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||| |||||||||||||||||||||||             ||||| |||||||||| ||||||||||||||||||||||||||||||    
T  5811024 ggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcacaaccacactttatctt 5810925  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctttttt 198  Q
     ||||| | |||| ||||| ||||||| | ||| ||||||||||||||||||||||| |||||||||||   ||||||||| |||||||||||||||||    
T  5810924 ctatttgtgtggggtccaagttgccacatgtcaaaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactctttttt 5810826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 42 - 196
Target Start/End: Original strand, 35069763 - 35069917
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| || | ||||| ||||||||| ||||||||||||    
T  35069763 tacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtgaggtccaagttgccacgtgtcagaattttgt 35069862  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctttt 196  Q
     | | |||||||| |||||||||||||    |||||||| |||||||||||||||    
T  35069863 gtagatgtaaaggatatattgccacataggatggtacatgtatcatcactctttt 35069917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 41861716 - 41861868
Alignment:
Q  42 tacaccccatgtattatgga--tattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaatttt 139  Q
    ||||||| ||||||||| ||  |||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||  ||||||||| ||||||||||    
T  41861716 tacaccctatgtattatagagatattttggtaagtttatctcacaaccacactttatcttctatttgtatggggtccaggttgccacgtgtcagaatttt 41861815  T
Q  140 gtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
    ||||||||||||||||| |||||||||||  |||||||||| ||||| |||||    
T  41861816 gtatgggtgtaaagggtgtattgccacatggagtggtacatgtatcaccactc 41861868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 44416992 - 44416841
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||| | |||| ||||| ||||||||| |||||| |||||    
T  44416992 tacaccccatgtattagggatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaaatttgt 44416893  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     ||| |||||| ||| |||||||||||   ||||||||| ||||||||||||    
T  44416892 gtggatgtaaaaggtgtattgccacatgaggtggtacatgtatcatcactct 44416841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 42 - 192
Target Start/End: Complemental strand, 43343682 - 43343532
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||| | |||| ||||| ||||||||| |||||| |||||    
T  43343682 tacaccccatgtattagggatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaaatttgt 43343583  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||| |||||| ||| |||||||||||   ||||||||| |||||||||||    
T  43343582 gtggatgtaaaaggtgtattgccacatgaggtggtacatgtatcatcactc 43343532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 5015437 - 5015581
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||||| ||||||||| ||||||||||||    
T  5015437 tacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgt 5015536  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatca 186  Q
     || ||||||| ||| |||||||||||   ||||||||| |||||    
T  5015537 gtgagtgtaaaaggtgtattgccacatggggtggtacatgtatca 5015581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 10573791 - 10573941
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| | |||||||||||| |||||||||||||||||||||||||| ||||||| |||| || | |||||||| |||||||||||| |    
T  10573791 tacaccccatgtattaggaatattttggtaaattcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatatcagaattttat 10573890  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     |||||||||||| ||||||| |||||   ||||||||| ||||| |||||    
T  10573891 gtgggtgtaaaggatatattgtcacatgcggtggtacatgtatcaccactc 10573941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 38160637 - 38160511
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||| ||||||| |||| ||||| ||||||||| ||||||||||||    
T  38160637 tacaccccatgtattagggatattttagtaacttcatctcacaactacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgt 38160538  T
Q  142 atgggtgtaaagggtatattgccacat 168  Q
     ||||||||| |||| |||||||||||    
T  38160537 gtgggtgtaaggggtgtattgccacat 38160511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 42972894 - 42973020
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| | |||| ||||| ||||||||| ||||||||||||    
T  42972894 tacacctcatgtattagggatattttggtaagttcatctcacaaccacattttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgt 42972993  T
Q  142 atgggtgtaaagggtatattgccacat 168  Q
     |||||||||| ||| |||||||||||    
T  42972994 gtgggtgtaaatggtgtattgccacat 42973020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 16180415 - 16180262
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||||| |||||||  |||||||||||| |||||||||||||||||||||||||| ||||| | |||| ||||  ||||||||| ||||||||||||    
T  16180415 tacaccccacgtattataaatattttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgt 16180316  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactcttt 195  Q
     ||| |||||| ||| |||||||||||   ||||||||| ||||||||||||||    
T  16180315 gtggatgtaaaaggtgtattgccacatggggtggtacatgtatcatcactcttt 16180262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 42 - 199
Target Start/End: Complemental strand, 4638257 - 4638100
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| | |||| || |  || |||||| ||||||| ||||    
T  4638257 tacaccccatatattatggatattttggtaagttcatctcacaaccatactttatcttctatttgtgtggggtctaggttaccacgtgtcagaatcttgt 4638158  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactcttttttc 199  Q
    |||| |||||||||| ||||| ||| |   ||||||||| ||||| |||||| |||||    
T  4638157 atggatgtaaagggtgtattgtcacgtagggtggtacatgtatcaccactctgttttc 4638100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 45326062 - 45326214
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| |||| | | |||| | |||||||||| |    
T  45326062 tacaccccatatattagggatattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccagactaccacctgtcagaattttat 45326161  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
     |||||||||| ||| ||||| |||||   ||||||||| ||||| |||||||    
T  45326162 gtgggtgtaaatggtgtattgtcacatggggtggtacatgtatcaccactctt 45326214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 27393310 - 27393171
Alignment:
Q  50 atgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgt 149  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||| ||||  ||||| | | |||||||||| | |||||||    
T  27393310 atgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgcctcatgtcagaattttatgtgggtgt 27393211  T
Q  150 aaagggtatattgccacatttagtggtacatctatcatca 189  Q
    ||||| | |||||||||||   ||||||||| ||||||||    
T  27393210 aaaggatgtattgccacatggggtggtacatgtatcatca 27393171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 48 - 168
Target Start/End: Complemental strand, 26898454 - 26898334
Alignment:
Q  48 ccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggt 147  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||| || ||||| | |||| ||||  || |||||| |||||||||| | |||||    
T  26898454 ccatgtattagggatattttggtaagttcatcttacaaccacactttatattctatttgtgtggggtccaggttaccacgtgtcagaattttatgtgggt 26898355  T
Q  148 gtaaagggtatattgccacat 168  Q
    ||||| ||| |||||||||||    
T  26898354 gtaaaaggtgtattgccacat 26898334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 47279744 - 47279628
Alignment:
Q  80 tcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtaca 179  Q
    |||||||||||||||||||| ||||||||| ||||||| ||| |||| |||||||||||| | ||||| |||||||| ||||| || ||    |||||||    
T  47279744 tcacaaccacactttatcttctatttatataggatccagattaccacatatcagaattttatgtgggtataaagggtgtattgtcagatgggatggtaca 47279645  T
Q  180 tctatcatcactctttt 196  Q
    | ||||| |||||||||    
T  47279644 tgtatcaccactctttt 47279628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 9216348 - 9216495
Alignment:
Q  47 cccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatggg 146  Q
    |||||| ||||  ||||||||||||||||||||||||||||||| |||||||| ||||| | |||| |  || ||||| | | |||||||||||| |||     
T  9216348 cccatgcattagagatattttggtaagttcatctcacaaccacattttatcttctatttgtgtggggtttaagttgccgcatgtcagaattttgtgtgga 9216447  T
Q  147 tgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
    |||||| ||| ||||| |||||   |||||| || ||||||| |||||    
T  9216448 tgtaaaaggtgtattgtcacatggggtggtatatatatcatccctctt 9216495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 43317502 - 43317610
Alignment:
Q  59 ggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtat 158  Q
    |||||||||| ||| |||||||||||| |||||||  |||| ||||| | |||| || | |||||||| | |||||||||||| ||||||||| |||| |    
T  43317502 ggatattttgataaattcatctcacaatcacacttactcttctatttgtgtggggtctagattgccacatgtcagaattttgtgtgggtgtaaggggtgt 43317601  T
Q  159 attgccaca 167  Q
    |||||||||    
T  43317602 attgccaca 43317610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 167
Target Start/End: Complemental strand, 5194289 - 5194164
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||| |||| ||| |||||||||| ||| |||||||||||| |||||||  |||| ||||| | |||| || | |||||||| | ||| ||||||||    
T  5194289 tacaccctatgttttaaggatattttgataaattcatctcacaatcacacttactcttctatttgtgtggggtctagattgccacatgtcaaaattttgt 5194190  T
Q  142 atgggtgtaaagggtatattgccaca 167  Q
     ||||||||| || | ||||||||||    
T  5194189 gtgggtgtaagggttgtattgccaca 5194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 24280635 - 24280555
Alignment:
Q  61 atattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||| |||||||||||| |||||||| |||| ||||| | |||| ||||| ||||||  ||||||||||||||    
T  24280635 atattttggtaaattcatctcacaatcacactttctcttctatttgtgtggggtccaagttgccatatatcagaattttgt 24280555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 31513332 - 31513387
Alignment:
Q  45 accccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    |||||||| |||| |||||||||||||| ||||||||||||||| ||||| |||||    
T  31513332 accccatgcattaaggatattttggtaaattcatctcacaaccatactttctcttt 31513387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 38160694 - 38160661
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctaca 45  Q
    ||||||||||||||||||||||||||||||||||    
T  38160694 ggaaaatgttacatgaacaccctttattcctaca 38160661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 43
Target Start/End: Original strand, 9216302 - 9216333
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattccta 43  Q
    ||||||||||||||||||||||||||||||||    
T  9216302 ggaaaatgttacatgaacaccctttattccta 9216333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 31408691 - 31408633
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    |||| |||||| |||| |||||||||||||| ||||| ||||||||| ||||| |||||    
T  31408691 tacatcccatgcattaaggatattttggtaaattcatttcacaaccatactttctcttt 31408633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 40236961 - 40237007
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaacca 88  Q
    ||||||||||| |||| ||| |||||||||| |||||||||||||||    
T  40236961 tacaccccatgcattagggacattttggtaatttcatctcacaacca 40237007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 41861674 - 41861702
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattc 40  Q
    |||||||||||||||||||||||||||||    
T  41861674 ggaaaatgttacatgaacaccctttattc 41861702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 2e-47; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 2614749 - 2614556
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||||||||||||||||||||| |||||            |||||| |||||||||||||||||||||||||||||||||||||||||    
T  2614749 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 2614650  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     ||||| | |||| |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||   ||||||||| |||||| |||||    
T  2614649 ctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactct 2614556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 42 - 192
Target Start/End: Complemental strand, 41334721 - 41334571
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||||  ||||||||| ||||||||||||    
T  41334721 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgt 41334622  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
    ||||||||||||||| |||||||||||   ||||||||| ||||| |||||    
T  41334621 atgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactc 41334571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 7617175 - 7617327
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || ||| ||| | ||||||||||||    
T  7617175 tacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtgggatctaagttgtcacatgtcagaattttgt 7617274  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctt 194  Q
     | |||||||| ||| |||||||||||   ||| ||||| |||||||||||||    
T  7617275 gttggtgtaaaaggtgtattgccacatggggtgatacatgtatcatcactctt 7617327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 5257037 - 5257188
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||| |||| || | |||||||| | |||||||||| |    
T  5257037 tacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttat 5257136  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     |||||||||||||| |||||||||||   ||||||||| ||||| ||||||    
T  5257137 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactct 5257188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 18033982 - 18034174
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||||||||||||||||||||||||||| ||||            |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  18033982 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 18034081  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||||| | |||| ||||  ||||||||| |||||||||| |||||||||||||||| |||||||| ||   ||||||||| |||||||||||    
T  18034082 ctatttgtgtggggtccaggttgccacgtgtcagaattttatatgggtgtaaagggtgtattgccatatggggtggtacatgtatcatcactc 18034174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 33801511 - 33801662
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| | |||||||||| ||||||||| ||||||||||||    
T  33801511 tacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttgt 33801610  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
     ||||||||||| || |||||||||||     ||||||| ||||||||||||    
T  33801611 gtgggtgtaaagagtgtattgccacatgggaaggtacatatatcatcactct 33801662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 22512305 - 22512472
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||||||||||||||||||||||||||| ||||            |||||| |||||||||||||||||||||||||||||||||||||||||    
T  22512305 ggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 22512404  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccaca 167  Q
     ||||| | |||| ||||| ||||||||| |||||||||||| ||| |||||||||| ||||||||||    
T  22512405 ctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccaca 22512472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 38470621 - 38470765
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||||||||| |||||||||||||| ||||| |||||| ||||||||||||| ||||||| |||| |||| ||| ||||||||||||||||| |    
T  38470621 tacaccccatgtattaaggatattttggtaaattcatttcacaatcacactttatcttctatttatgtggggtccagattaccacgtatcagaattttat 38470720  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatca 186  Q
     |||||||||||||| |||||||| ||   ||||||||| |||||    
T  38470721 gtgggtgtaaagggtgtattgccatatgaggtggtacatgtatca 38470765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 25915002 - 25914902
Alignment:
Q  94 tatcttttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactct 193  Q
    |||||| ||||| | |||| ||||  ||||||||| |||||||||||| |||||||||| ||| |||||||||||   ||||||||| ||||||||||||    
T  25915002 tatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaatggtgtattgccacatgaggtggtacatgtatcatcactct 25914903  T
Q  194 t 194  Q
    |    
T  25914902 t 25914902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 47 - 167
Target Start/End: Complemental strand, 39122486 - 39122366
Alignment:
Q  47 cccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgtatggg 146  Q
    ||||||||||| | |||||||||||| ||||||||||||| |||||||||||| ||||| | |||| |  |  ||||||| | ||||||| |||| |||     
T  39122486 cccatgtattaggaatattttggtaaattcatctcacaactacactttatcttctatttgtgtggggtttaggttgccacatgtcagaatcttgtgtgga 39122387  T
Q  147 tgtaaagggtatattgccaca 167  Q
    |||||| | ||||||| ||||    
T  39122386 tgtaaatgatatattgtcaca 39122366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 33855143 - 33855104
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat 51  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccat 33855104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 17208116 - 17208174
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| ||| |||||||||| ||||||||||||||| ||||| |||||    
T  17208116 tacaccccatgcattaaggacattttggtaaattcatctcacaaccatactttctcttt 17208174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 32473452 - 32473394
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    |||||| |||| |||| |||||||||||||| ||||||||||||||| ||||| |||||    
T  32473452 tacaccacatgcattagggatattttggtaatttcatctcacaaccatactttctcttt 32473394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 25915085 - 25915052
Alignment:
Q  14 aaaatgttacatgaacaccctttattcctacacc 47  Q
    ||||||||||||||||||||||||||||||||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacc 25915052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 30622772 - 30622719
Alignment:
Q  47 cccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    |||||| |||| |||||||||||||| || |||||||||||| ||||| |||||    
T  30622772 cccatgcattaaggatattttggtaaatttatctcacaaccatactttctcttt 30622719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 7617133 - 7617161
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattc 40  Q
    |||||||||||||||||||||||||||||    
T  7617133 ggaaaatgttacatgaacaccctttattc 7617161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 41334763 - 41334735
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattc 40  Q
    |||||||||||||||||||||||||||||    
T  41334763 ggaaaatgttacatgaacaccctttattc 41334735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 685 - 881
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||||||||||||||||||||||| |||            |||||| |||||||||||||||||||||||||||||||||||||||||    
T  685 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 784  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactctttt 196  Q
     ||||| | |||  ||||  ||||||||| |||||||||||| |||||||||||||| |||||||||||   ||||||||| ||||| | |||||||    
T  785 ctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgaggtggtacatatatcaccgctctttt 881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 14288 - 14097
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||||||||||||||| |||||||||||            |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  14288 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 14189  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||||| | |||| ||||  ||||||||| |||||||||||| ||| |||||||||| |||||||||||   ||||||||| |||||||||||    
T  14188 ctatttgtgtggg-tccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 14097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 24616 - 24425
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacaccccat------------gtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    |||||||||||||||||||||||||||| |||||||||||            |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  24616 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 24517  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     ||||| | |||| ||||  ||||||||| |||||||||||| ||| |||||||||| |||||||||||   ||||||||| |||||||||||    
T  24516 ctatttgtgtggg-tccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 24425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 11293 - 11443
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttttatttatatgggatccaaattgccacgtatcagaattttgt 141  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||| || |||| ||||| |||| |||| ||||||||||||    
T  11293 tacaccccatatattagggatattttggtaagttcatctcacaaccacactttatcttctattgatgtggggtccaagttgctacgtgtcagaattttgt 11392  T
Q  142 atgggtgtaaagggtatattgccacatttagtggtacatctatcatcactc 192  Q
     | ||||||||  || |||||||||||    |||||||| |||||||||||    
T  11393 gtaggtgtaaatagtgtattgccacatgggatggtacatgtatcatcactc 11443  T

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Target: scaffold0157 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 23521 - 23369
Alignment:
Q  12 ggaaaatgttacatgaacaccctttattcctacac------------cccatgtattatggatattttggtaagttcatctcacaaccacactttatctt 99  Q
    ||||||||||| |||||||||||||||||||||||            |||||||||||  ||||||||||||||||||||| |||| |||||||||||||    
T  23521 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatctt 23422  T
Q  100 ttatttatatgggatccaaattgccacgtatcagaattttgtatgggtgtaaa 152  Q
     ||||| | || | | ||| ||||||||| | |||||||||| ||||||||||    
T  23421 ctatttgtgtgaggttcaatttgccacgtgttagaattttgtgtgggtgtaaa 23369  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 45769 - 45719
Alignment:
Q  50 atgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    |||||||| |||||||||||||| ||||||||||||||| ||||| |||||    
T  45769 atgtattaaggatattttggtaaattcatctcacaaccatactttctcttt 45719  T

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Target: scaffold0100 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 35514 - 35456
Alignment:
Q  42 tacaccccatgtattatggatattttggtaagttcatctcacaaccacactttatcttt 100  Q
    ||||||||||| |||| ||| || ||||||| ||||||||||||||| ||||| |||||    
T  35514 tacaccccatgcattagggacatattggtaaattcatctcacaaccatactttctcttt 35456  T

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