View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0256_low_10 (Length: 382)
Name: NF0256_low_10
Description: NF0256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0256_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 112 - 371
Target Start/End: Original strand, 46942353 - 46942614
Alignment:
| Q |
112 |
agcaatgagcttcgaaaatctcaatatttcttccgtgataatcgtctttctcctcaaacagaacatgttgaagaagagaataatctgtgcaggaacattg |
211 |
Q |
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| T |
46942353 |
agcaatgagcttcgaaaatctaaatatttcttcggtgataatcgtctttctcctcaaacagaacatgttgaagaagagaataatctgtgcaggaacattg |
46942452 |
T |
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| Q |
212 |
ttgatgaagaattgtgccatcaagcttcgaagaaaatggttagcataaatgataaggcggaggagatcattttaacaagtacgaagaaaaggaataaagt |
311 |
Q |
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| T |
46942453 |
ttgatgaagaattgtgccatcaagcttcgaagaaaatggttagcataaatgatatggcggaggagatcattttaacaagtacgaagaaaaggaataaagt |
46942552 |
T |
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| Q |
312 |
ccttccat--nnnnnnnnttacatggatcatgattcatgaagaatgttcgaaacctcttcat |
371 |
Q |
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| T |
46942553 |
ccttccataaaaaaaaaattacatggatcatgattcatgaagaatgtttgaaacctcttcat |
46942614 |
T |
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