View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0256_low_4 (Length: 455)
Name: NF0256_low_4
Description: NF0256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0256_low_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 97 - 455
Target Start/End: Complemental strand, 25452984 - 25452614
Alignment:
| Q |
97 |
atttcaaacactatcagagatcattctctcgtttcgtttt------------gaacatatcatcctaaataatccaagtgcaaacatagctggaagcagc |
184 |
Q |
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| T |
25452984 |
atttcaaacactatcagagatcattctctcgttttgttttagtggatatattgaacatatcatcctaaataatccaagtgcaaacatagctggaagcagc |
25452885 |
T |
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| Q |
185 |
aaggaagaataaggctagcaatttattatttaaatagaaaacatttttcattaacagaatatcatatgaatgctaaacagcaacttacaacatctccttt |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25452884 |
aaggaagaataaggctagcaatttattatttaaatagaaaacatttttcattaacagaatatcatatgaatgctaaacagcaacttacaacatctccttt |
25452785 |
T |
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| Q |
285 |
gttgtgaagatatgtagtatctagtttagcagggtaaacagtatcatcatcgtcatcatctcattcttcaacactagaacttgccacatgccacttggga |
384 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25452784 |
gttgtgaagatatgtagtatctagtttagcagggtaaacagtatcatcatcgtcatcatctcattcttcaacactagaacttgccacatgccacttggga |
25452685 |
T |
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| Q |
385 |
gaaattggcctaatcccttttctcttctggttacctaaaagtgctgannnnnnngtacaagcatcttcttg |
455 |
Q |
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|||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||| |
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| T |
25452684 |
gaaattggcctaataccttttctcttctgcgtacctaaaagtgctgatttttctgtacaagcatcttcttg |
25452614 |
T |
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