View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0257_high_9 (Length: 267)
Name: NF0257_high_9
Description: NF0257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0257_high_9
Alignment Details
Target: chr6 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 31694272 - 31694524
Alignment:
Q
1
ttctctctacagtttcatcccatctcccattccgcctccgtccaatccaccggcggcagcctcttagccgcctaccacctccaagtccg-cctctgcacc
99
Q
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
T
31694272
ttctctctacagtttcatcccatctcccatttcgcctccgtccaatccaccggcggcagcctcttagccgcctaccacctccaagtccgccctctgcacc
31694371
T
Q
100
gtctctctcccagtctcgcacaataacaggtatcctctannnnnnnnnnnnnnnnnncattttctgttttgaatctcaattattagggttactcaatttg
199
Q
||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
T
31694372
gtctctctcccagtctcgcacaataacaggtatcctctatctctctctctctctctccattttcttttttgaatctcaattattagggttactcaatttg
31694471
T
Q
200
ggattttttgcgtttgactctaattatgttaaattgatgattgattgtataat
252
Q
|||||||||||||||||||||||||||||| ||||||||||||||||||||||
T
31694472
ggattttttgcgtttgactctaattatgtttaattgatgattgattgtataat
31694524
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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