View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0257_low_18 (Length: 240)
Name: NF0257_low_18
Description: NF0257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0257_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 55654415 - 55654286
Alignment:
| Q |
52 |
cataatggtatggagtgtagcaacgatattattttgctacagctacacaatagggaagttgattcccaaaggtaaggtaagacttgtaaccctaattcca |
151 |
Q |
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| T |
55654415 |
cataatggtatggagtgtagcaacaatattattttgctacagctacacaatagggaagttgattcccaaaggtaaggtaagatttgtaaccctaattcca |
55654316 |
T |
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| Q |
152 |
cccataataatcctcctccttctccctatg |
181 |
Q |
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| T |
55654315 |
cccataataatcctcctccttctccctatg |
55654286 |
T |
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