View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0257_low_7 (Length: 321)
Name: NF0257_low_7
Description: NF0257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0257_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 93 - 265
Target Start/End: Original strand, 39353903 - 39354069
Alignment:
| Q |
93 |
aaattctctgtgatcgttagtttgattagcgtcacaaagcagcatgttcttgtggatattccgtccaagacaagagtttgaggctttattcttcacggaa |
192 |
Q |
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| T |
39353903 |
aaattctctgtgatcgttagtttgattagcgtcacaaagcagcatgttcttgtggatattccatcgaatacaagagtttgaggctttattcttcacggaa |
39354002 |
T |
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| Q |
193 |
ttacattccacacatcagagtcacaccacaataatgttttctcaaaattacctcatgccgctcgtgccttcat |
265 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39354003 |
ttacattccacaca------tcacaccacaataatgttttctcaaaattacctcatgccgctcgtgccttcat |
39354069 |
T |
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