View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0258_high_7 (Length: 383)

Name: NF0258_high_7
Description: NF0258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0258_high_7
NF0258_high_7
[»] chr3 (5 HSPs)
chr3 (26-355)||(41048347-41048674)
chr3 (276-355)||(44197443-44197522)
chr3 (72-117)||(187323-187368)
chr3 (72-117)||(37612816-37612861)
chr3 (36-67)||(36120516-36120547)
[»] chr7 (2 HSPs)
chr7 (26-355)||(21891695-21892023)
chr7 (72-117)||(27839105-27839150)
[»] chr1 (5 HSPs)
chr1 (25-355)||(52040114-52040430)
chr1 (25-355)||(13620279-13620595)
chr1 (273-355)||(48212913-48212995)
chr1 (72-117)||(3931115-3931160)
chr1 (72-117)||(26430534-26430579)
[»] chr5 (4 HSPs)
chr5 (25-355)||(1687785-1688101)
chr5 (287-351)||(43131044-43131108)
chr5 (72-117)||(22604040-22604085)
chr5 (72-117)||(36367534-36367579)
[»] chr8 (2 HSPs)
chr8 (25-355)||(27260199-27260515)
chr8 (72-117)||(11695703-11695748)
[»] chr6 (2 HSPs)
chr6 (273-355)||(19963909-19963991)
chr6 (72-100)||(11267177-11267205)
[»] chr4 (4 HSPs)
chr4 (273-351)||(13676731-13676809)
chr4 (74-115)||(16894538-16894579)
chr4 (72-117)||(33487786-33487831)
chr4 (72-117)||(43015996-43016041)
[»] chr2 (2 HSPs)
chr2 (72-117)||(7363397-7363442)
chr2 (36-67)||(40566116-40566147)


Alignment Details
Target: chr3 (Bit Score: 274; Significance: 1e-153; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 26 - 355
Target Start/End: Original strand, 41048347 - 41048674
Alignment:
Q  26 acctcttgggtagtttatgattatgtttgagtgagataaatatttgtggtttgttgttttcatagagttatctacatctcttcctaatttgcagttttcc 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41048347 acctcttgggtagtttatgattatgtttgagtgagataaatatttgtggtttgttgttttcatagagttatctacatctcttcctaatttgcagttttcc 41048446  T
Q  126 atagagttgcagcaacacatcatatcgcataagagggtggttcaagcgacgatgatagatagaaggtttctaattgcggggagtgacttgctgaaccnnn 225  Q
    |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||       
T  41048447 a--gagttgcagcaacacatcatattgcataagagggtggttcaagcgacgatgatagatagaaggtttctaattgcggggagtggcttgctgaaccttt 41048544  T
Q  226 nnnnaggtttctttcacaaatcaaggcaatatttgtgggtttgattttataaaaaatcttggtttgtgttcatgatggggagtgatagtagaggaaaaga 325  Q
        |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||    
T  41048545 ttttaggtttctttcacaaatcaaggtaatatttgtgggtttgattttataaaaaatcttggtgtgtgtttatgatggggagtaatagtagaggaaaaga 41048644  T
Q  326 tggtgaaggaacttctggaattaacagggt 355  Q
    ||||||||||||||||||||||||||||||    
T  41048645 tggtgaaggaacttctggaattaacagggt 41048674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 276 - 355
Target Start/End: Complemental strand, 44197522 - 44197443
Alignment:
Q  276 aaaaaatcttggtttgtgttcatgatggggagtgatagtagaggaaaagatggtgaaggaacttctggaattaacagggt 355  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44197522 aaaaattcttggtttgtgtttatgatggggagtaatagtagaggaaaagatggtgaaggaacttctggaattaacagggt 44197443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 187323 - 187368
Alignment:
Q  72 tggtttgttgttttcatagagttatctacatctcttcctaatttgc 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  187323 tggtttgttgttttcatagagttatctacatatcttcctaatttgc 187368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 37612861 - 37612816
Alignment:
Q  72 tggtttgttgttttcatagagttatctacatctcttcctaatttgc 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  37612861 tggtttgttgttttcatagagttatctacatatcttcctaatttgc 37612816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 67
Target Start/End: Complemental strand, 36120547 - 36120516
Alignment:
Q  36 tagtttatgattatgtttgagtgagataaata 67  Q
    ||||||||||||||||||||||||||||||||    
T  36120547 tagtttatgattatgtttgagtgagataaata 36120516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 26 - 355
Target Start/End: Complemental strand, 21892023 - 21891695
Alignment:
Q  26 acctcttgggtagtttatgattatgtttgagtgagataaatatttgtggtttgttgttttcatagagttatctacatctcttcctaatttgcagttttcc 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21892023 acctcttgggtagtttatgattatgtttgagtgagataaatatttgtggtttgttgttttcattgagttatctacatctcttcctaatttgcagttttcc 21891924  T
Q  126 atagagttgcagcaacacatcatatcgcataagagggtggttcaagcgacgatgatagatagaaggtttctaattgcggggagtgacttgctgaaccnnn 225  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||       
T  21891923 atagagttgcagcaacacatcatatcgcttaagagggtagttcaagcgacgatgatagatagaaggtttctaattgcggggagtggcttgctgaacctat 21891824  T
Q  226 nnnnaggtttctttcacaaatcaaggcaatatttgtgggtttgattttataaaaaatcttggtttgtgttcatgatggggagtgatagtagaggaaaaga 325  Q
        |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  21891823 ttttaggtttctttcacaaatcaaggtaatatttgtggg-ttgattttataaaaaatcttggtttgtgtttatgatggggagtaatagtagaggaaaaga 21891725  T
Q  326 tggtgaaggaacttctggaattaacagggt 355  Q
    ||||||||||||||||||||||||||||||    
T  21891724 tggtgaaggaacttctggaattaacagggt 21891695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 27839105 - 27839150
Alignment:
Q  72 tggtttgttgttttcatagagttatctacatctcttcctaatttgc 117  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||    
T  27839105 tggtttgttgttttcatagagttatctacgtatcttcctaatttgc 27839150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 264; Significance: 1e-147; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 25 - 355
Target Start/End: Complemental strand, 52040430 - 52040114
Alignment:
Q  25 cacctcttgggtagtttatgattatgtttgagtgagataaatatttgtggtttgttgttttcatagagttatctacatctcttcctaatttgcagttttc 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  52040430 cacctcttgggtagtttatgattatgtttgagtgagataaatatttgtggtttgttgttttcatagagttatctacatctcttcctaatttgcagtttcc 52040331  T
Q  125 catagagttgcagcaacacatcatatcgcataagagggtggttcaagcgacgatgatagatagaaggtttctaattgcggggagtgacttgctgaaccnn 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       
T  52040330 catagagttgcagcaacacatcatatcgcataagagggtggttcaagcgacgatgatagatagaaggtttctaattgcggggagtggcttgctgaac--- 52040234  T
Q  225 nnnnnaggtttctttcacaaatcaaggcaatatttgtgggtttgattttataaaaaatcttggtttgtgttcatgatggggagtgatagtagaggaaaag 324  Q
               |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  52040233 -----------ctttcacaaatcaaggtaatatttgtgggtttgattttataaaaaatcttggtttgtgtttatgatggggagtaatagtagaggaaaag 52040145  T
Q  325 atggtgaaggaacttctggaattaacagggt 355  Q
    |||||||||||||||||||||||||||||||    
T  52040144 atggtgaaggaacttctggaattaacagggt 52040114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 25 - 355
Target Start/End: Original strand, 13620279 - 13620595
Alignment:
Q  25 cacctcttgggtagtttatgattatgtttgagtgagataaatatttgtggtttgttgttttcatagagttatctacatctcttcctaatttgcagttttc 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13620279 cacctcttgggtagtttatgattatgtttgagtgagataaatatttgtggtttgttgttttcatagagttatctacatctcttcctaatttgcagtttcc 13620378  T
Q  125 catagagttgcagcaacacatcatatcgcataagagggtggttcaagcgacgatgatagatagaaggtttctaattgcggggagtgacttgctgaaccnn 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       
T  13620379 catagagttgcagcaacacatcatatcgcataagagggtggttcaagcgacgatgatagatagaaggtttctaattgcggggagtggcttgctgaac--- 13620475  T
Q  225 nnnnnaggtttctttcacaaatcaaggcaatatttgtgggtttgattttataaaaaatcttggtttgtgttcatgatggggagtgatagtagaggaaaag 324  Q
               |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  13620476 -----------ctttcacaaatcaaggtaatatttgtgggtttgattttataaaaaatcttggtttgtgtttatgatggggggtaatagtagaggaaaag 13620564  T
Q  325 atggtgaaggaacttctggaattaacagggt 355  Q
    |||||||||||||||||||||||||||||||    
T  13620565 atggtgaaggaacttctggaattaacagggt 13620595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 273 - 355
Target Start/End: Complemental strand, 48212995 - 48212913
Alignment:
Q  273 tataaaaaatcttggtttgtgttcatgatggggagtgatagtagaggaaaagatggtgaaggaacttctggaattaacagggt 355  Q
    |||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  48212995 tataaaaattcttggtttgtgtttatgatggggagtaatagtagaggaaaagatggtgaaggaacttctgggattaacagggt 48212913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 3931160 - 3931115
Alignment:
Q  72 tggtttgttgttttcatagagttatctacatctcttcctaatttgc 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  3931160 tggtttgttgttttcatagagttatctacatatcttcctaatttgc 3931115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 26430579 - 26430534
Alignment:
Q  72 tggtttgttgttttcatagagttatctacatctcttcctaatttgc 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  26430579 tggtttgttgttttcatagagttatctacatatcttcctaatttgc 26430534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 248; Significance: 1e-137; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 25 - 355
Target Start/End: Complemental strand, 1688101 - 1687785
Alignment:
Q  25 cacctcttgggtagtttatgattatgtttgagtgagataaatatttgtggtttgttgttttcatagagttatctacatctcttcctaatttgcagttttc 124  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  1688101 cacctcttgggtagtttatgattatgttttagtgagataaatatttgtggtttgttgttttcatagagttctctacatctcttcctaatttgcagtttcc 1688002  T
Q  125 catagagttgcagcaacacatcatatcgcataagagggtggttcaagcgacgatgatagatagaaggtttctaattgcggggagtgacttgctgaaccnn 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||       
T  1688001 catagagttgcagcaacacatcatatcgcataagagggtggttcaagcgatgatgatagatagaaggtttctaattgcggggagtggcttgctgaac--- 1687905  T
Q  225 nnnnnaggtttctttcacaaatcaaggcaatatttgtgggtttgattttataaaaaatcttggtttgtgttcatgatggggagtgatagtagaggaaaag 324  Q
               |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  1687904 -----------ctttcacaaatcaaggtaatatttgtgtgtttgattttataaaaaatcttggtttgtgtttatgatggggagtaatagtagaggaaaag 1687816  T
Q  325 atggtgaaggaacttctggaattaacagggt 355  Q
    |||||||||||||||||||||||||||||||    
T  1687815 atggtgaaggaacttctggaattaacagggt 1687785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 351
Target Start/End: Original strand, 43131044 - 43131108
Alignment:
Q  287 gtttgtgttcatgatggggagtgatagtagaggaaaagatggtgaaggaacttctggaattaaca 351  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43131044 gtttgtgtttgtgatggggagtaatagtagaggaaaagatggtgaaggaacttctggaattaaca 43131108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 22604085 - 22604040
Alignment:
Q  72 tggtttgttgttttcatagagttatctacatctcttcctaatttgc 117  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||    
T  22604085 tggtttgttgttttcatagagttatctacgtatcttcctaatttgc 22604040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 36367579 - 36367534
Alignment:
Q  72 tggtttgttgttttcatagagttatctacatctcttcctaatttgc 117  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||    
T  36367579 tggtttgttgttttcatagagttatctacatatcttccaaatttgc 36367534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 25 - 355
Target Start/End: Complemental strand, 27260515 - 27260199
Alignment:
Q  25 cacctcttgggtagtttatgattatgtttgagtgagataaatatttgtggtttgttgttttcatagagttatctacatctcttcctaatttgcagttttc 124  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  27260515 cacctcttggatagtttatgattatgtttgagtgagataaatatttgtggtttgttgttttcatagagttatctacatctcttcctaatttgcagtttct 27260416  T
Q  125 catagagttgcagcaacacatcatatcgcataagagggtggttcaagcgacgatgatagatagaaggtttctaattgcggggagtgacttgctgaaccnn 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||       
T  27260415 catagagttgcagcaacacatcatatcgcataagagggtggttcaagcgactatgatagatagaaggtttctaattgcggggagtggcttgctgaac--- 27260319  T
Q  225 nnnnnaggtttctttcacaaatcaaggcaatatttgtgggtttgattttataaaaaatcttggtttgtgttcatgatggggagtgatagtagaggaaaag 324  Q
               |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  27260318 -----------ctttcacaaatcaaggtaatatttgtgggtttgattatataaaaaatcttggtttgtgtttatgatggggagtaatagtagaggaaaag 27260230  T
Q  325 atggtgaaggaacttctggaattaacagggt 355  Q
    |||| ||||||||||||||||||||||||||    
T  27260229 atggcgaaggaacttctggaattaacagggt 27260199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 11695703 - 11695748
Alignment:
Q  72 tggtttgttgttttcatagagttatctacatctcttcctaatttgc 117  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  11695703 tggtttgttgttttcatagagttatctacatatcttcataatttgc 11695748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 273 - 355
Target Start/End: Original strand, 19963909 - 19963991
Alignment:
Q  273 tataaaaaatcttggtttgtgttcatgatggggagtgatagtagaggaaaagatggtgaaggaacttctggaattaacagggt 355  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  19963909 tataaaaaatcttggtttgtgtttatgatggggagtaatagtagaggaaaaaatggtgaaggaacttctggaattaacagggt 19963991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 100
Target Start/End: Original strand, 11267177 - 11267205
Alignment:
Q  72 tggtttgttgttttcatagagttatctac 100  Q
    |||||||||||||||||||||||||||||    
T  11267177 tggtttgttgttttcatagagttatctac 11267205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 5e-32; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 273 - 351
Target Start/End: Complemental strand, 13676809 - 13676731
Alignment:
Q  273 tataaaaaatcttggtttgtgttcatgatggggagtgatagtagaggaaaagatggtgaaggaacttctggaattaaca 351  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13676809 tataaaaaatcttggtttgtgtttatgatggggagtaatagtagaggaaaagatggtgaaggaacttctggaattaaca 13676731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 16894538 - 16894579
Alignment:
Q  74 gtttgttgttttcatagagttatctacatctcttcctaattt 115  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  16894538 gtttgttgttttcatagagttatctacatatcttcctaattt 16894579  T

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Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 33487831 - 33487786
Alignment:
Q  72 tggtttgttgttttcatagagttatctacatctcttcctaatttgc 117  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||    
T  33487831 tggtttgttgttttcatagagttatctacgtatcttcctaatttgc 33487786  T

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Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 43016041 - 43015996
Alignment:
Q  72 tggtttgttgttttcatagagttatctacatctcttcctaatttgc 117  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||    
T  43016041 tggtttgttgttttcatagagttatctacgtatcttcctaatttgc 43015996  T

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Target: chr2 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 7363397 - 7363442
Alignment:
Q  72 tggtttgttgttttcatagagttatctacatctcttcctaatttgc 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  7363397 tggtttgttgttttcatagagttatctacatatcttcctaatttgc 7363442  T

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Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 67
Target Start/End: Complemental strand, 40566147 - 40566116
Alignment:
Q  36 tagtttatgattatgtttgagtgagataaata 67  Q
    ||||||||||||||||||||||||||||||||    
T  40566147 tagtttatgattatgtttgagtgagataaata 40566116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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