View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0260_low_13 (Length: 324)
Name: NF0260_low_13
Description: NF0260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0260_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 105 - 239
Target Start/End: Complemental strand, 6829133 - 6828999
Alignment:
| Q |
105 |
aaattcgcataaagcctcggagacatttcattctatcctccacagcttgtatttgcgtatcaaggttgataaatttgaaatcccctttgagagactgaac |
204 |
Q |
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| T |
6829133 |
aaattcgaataaagcctcggagacacttcattctatcctccacagcttgtatttgcgtatcaaggttgataaatttgaaatcccctttgagagactgaac |
6829034 |
T |
|
| Q |
205 |
atttaccaaaacaccatccaacttagcaagtgcag |
239 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
6829033 |
atttaccaaaacaccatccaacttagcaagtgcag |
6828999 |
T |
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