View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0260_low_37 (Length: 236)
Name: NF0260_low_37
Description: NF0260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0260_low_37
[» ] chr4 (1 HSPs)
Alignment Details
Target: chr4 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 11024223 - 11024091
Alignment:
Q
104
taaccattggtactccggaacttattgcttccacggtcgcgttccagccacaatgcgttaagaatccgcctatcgatggatgatccaatattaacgcttg
203
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
11024223
taaccattggtactccggaacttattgcttccacggtcgcgttccagccacaatgcgttaagaatccgcctatcgatggatgatccaatattaacgcttg
11024124
T
Q
204
tggaacccatcctttaatcaacattcctttctt
236
Q
|||||||||||||||||||||||||||||||||
T
11024123
tggaacccatcctttaatcaacattcctttctt
11024091
T
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