View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0263_high_7 (Length: 297)
Name: NF0263_high_7
Description: NF0263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0263_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 8 - 284
Target Start/End: Complemental strand, 45330485 - 45330202
Alignment:
| Q |
8 |
tgtccagggtttttgctacgtccttaaatctccaccaacaaccataaaatcaacaaa-------gctatcttccaacacatacataaacataccatactc |
100 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |
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| T |
45330485 |
tgtccagggtttttgctacgtccttaaatccccaccaacaaccataaaatcaacaaacaacaaagctatcttccaacacatacatgaacataccatactc |
45330386 |
T |
|
| Q |
101 |
tacatgtcgtctgtcttgatatagataactcttaatatagatccagttgtaatactagttgaaattaatcacgaaaaatagataactcttaatatagatt |
200 |
Q |
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|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |
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| T |
45330385 |
tacacgtcgtctgtcttgatataggtaactcttaatatagatccagttgtaatactagttgaaattaatcatgaaaaatagataactcttaacatagatt |
45330286 |
T |
|
| Q |
201 |
cagctgtaattctttattaaatgcacaatactaacactcatcttagcatattaagaatcaaaaagaagaatttaccttgggtct |
284 |
Q |
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||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45330285 |
cagttgtaattctttattaaatgcacaatactgacactcatcttagcatattaagaatcaaaaagaagaatttaccttgggtct |
45330202 |
T |
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