View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0263_low_19 (Length: 257)
Name: NF0263_low_19
Description: NF0263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0263_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 228
Target Start/End: Original strand, 45330709 - 45330919
Alignment:
| Q |
5 |
ggagatagagcttttgtgtgtaattttgatatgcaacatataaatattgttcatcttttcctcttaatgttatttaacagctaccaaacatttctaggat |
104 |
Q |
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| T |
45330709 |
ggagatagagcttttgtgtgtaattttgatatgcaacgtagaaatattgttcatcttttcctcttgatgttatttaacagctaaca-------------t |
45330795 |
T |
|
| Q |
105 |
ggcaccgacactagtgggtgacgatcctgctctacaacttgaagcgactactaaactgaaaagtatataataatatggtatggataatgtagagatatca |
204 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |
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| T |
45330796 |
ggcaccgacactagtgggtgacgatcctgctctgcaacttgaagcgactactaaactgaaaagtatataataatatggtatgtataatgtagagatataa |
45330895 |
T |
|
| Q |
205 |
taagacaattttgaaagatgagaa |
228 |
Q |
| |
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|||||||||||||||||||||||| |
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| T |
45330896 |
taagacaattttgaaagatgagaa |
45330919 |
T |
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