View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0266_high_11 (Length: 251)

Name: NF0266_high_11
Description: NF0266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0266_high_11
NF0266_high_11
[»] chr7 (47 HSPs)
chr7 (97-222)||(43124244-43124369)
chr7 (27-110)||(43124395-43124478)
chr7 (27-105)||(45914626-45914704)
chr7 (27-105)||(4226227-4226305)
chr7 (31-109)||(27480093-27480171)
chr7 (27-105)||(47558132-47558210)
chr7 (27-105)||(12643202-12643280)
chr7 (31-109)||(22661463-22661541)
chr7 (48-105)||(25628601-25628658)
chr7 (27-101)||(12644057-12644131)
chr7 (43-105)||(18087586-18087648)
chr7 (48-105)||(32934594-32934651)
chr7 (27-105)||(5455929-5456007)
chr7 (27-105)||(13384604-13384682)
chr7 (27-105)||(18086391-18086469)
chr7 (48-102)||(25453377-25453431)
chr7 (48-102)||(42618160-42618214)
chr7 (27-104)||(4227093-4227170)
chr7 (48-105)||(10600195-10600252)
chr7 (56-105)||(23058675-23058724)
chr7 (48-105)||(32068219-32068276)
chr7 (48-105)||(32068342-32068399)
chr7 (27-158)||(32688425-32688544)
chr7 (48-105)||(42618034-42618091)
chr7 (49-105)||(27480667-27480723)
chr7 (27-105)||(18855902-18855980)
chr7 (27-105)||(33808425-33808503)
chr7 (59-105)||(46205555-46205601)
chr7 (48-105)||(22081682-22081739)
chr7 (62-103)||(23058566-23058607)
chr7 (48-105)||(25628724-25628781)
chr7 (48-105)||(27138187-27138244)
chr7 (48-105)||(28890702-28890759)
chr7 (48-105)||(32934471-32934528)
chr7 (62-103)||(43266514-43266555)
chr7 (48-104)||(25453251-25453307)
chr7 (48-99)||(22081811-22081862)
chr7 (59-105)||(12228519-12228565)
chr7 (48-105)||(43266389-43266446)
chr7 (68-105)||(47558987-47559024)
chr7 (27-103)||(29144232-29144308)
chr7 (43-103)||(32687515-32687575)
chr7 (48-100)||(39274994-39275045)
chr7 (57-105)||(47945480-47945528)
chr7 (57-105)||(47950910-47950958)
chr7 (48-103)||(46204544-46204599)
chr7 (63-105)||(33828220-33828262)
[»] chr4 (46 HSPs)
chr4 (111-222)||(55867192-55867303)
chr4 (25-107)||(23455607-23455689)
chr4 (27-107)||(55867360-55867440)
chr4 (27-105)||(23455056-23455134)
chr4 (31-109)||(56556688-56556766)
chr4 (48-105)||(27069033-27069090)
chr4 (48-105)||(50503948-50504005)
chr4 (31-108)||(52816340-52816417)
chr4 (49-109)||(38982512-38982572)
chr4 (43-101)||(147437-147495)
chr4 (59-105)||(22718185-22718231)
chr4 (48-102)||(27891707-27891761)
chr4 (31-109)||(38813660-38813738)
chr4 (31-109)||(38814243-38814321)
chr4 (31-105)||(52815769-52815843)
chr4 (48-105)||(32063584-32063641)
chr4 (48-105)||(50504071-50504128)
chr4 (48-105)||(52573351-52573408)
chr4 (31-108)||(56557242-56557319)
chr4 (58-105)||(40316911-40316958)
chr4 (58-105)||(40326985-40327032)
chr4 (48-102)||(9731461-9731515)
chr4 (59-105)||(22986985-22987031)
chr4 (48-105)||(10408135-10408192)
chr4 (48-105)||(27069156-27069213)
chr4 (48-105)||(39666899-39666956)
chr4 (48-105)||(45463319-45463376)
chr4 (48-105)||(51859530-51859587)
chr4 (48-105)||(52573474-52573531)
chr4 (48-105)||(54858683-54858740)
chr4 (27-107)||(11447975-11448055)
chr4 (48-104)||(39667023-39667079)
chr4 (59-105)||(30641651-30641697)
chr4 (59-105)||(39701043-39701089)
chr4 (48-105)||(10408012-10408069)
chr4 (48-105)||(11524072-11524129)
chr4 (48-105)||(39701155-39701212)
chr4 (48-105)||(45463196-45463253)
chr4 (48-105)||(54858806-54858863)
chr4 (48-99)||(51859658-51859709)
chr4 (48-103)||(3032705-3032760)
chr4 (46-105)||(39538201-39538260)
chr4 (27-101)||(148007-148081)
chr4 (48-102)||(5818024-5818078)
chr4 (68-102)||(11524198-11524232)
chr4 (56-101)||(50751750-50751795)
[»] chr3 (51 HSPs)
chr3 (27-107)||(32717023-32717103)
chr3 (27-105)||(32716351-32716429)
chr3 (31-109)||(45279200-45279278)
chr3 (31-109)||(2944582-2944660)
chr3 (27-105)||(29192137-29192215)
chr3 (27-105)||(29192913-29192991)
chr3 (31-108)||(2944019-2944096)
chr3 (31-109)||(1756656-1756734)
chr3 (31-109)||(37249714-37249792)
chr3 (31-109)||(45278650-45278728)
chr3 (31-109)||(48189015-48189093)
chr3 (48-105)||(3596355-3596412)
chr3 (48-105)||(35643974-35644031)
chr3 (48-105)||(40788666-40788723)
chr3 (48-105)||(41422095-41422152)
chr3 (31-108)||(48188484-48188561)
chr3 (50-108)||(11026549-11026607)
chr3 (48-105)||(3469323-3469380)
chr3 (49-109)||(1757220-1757280)
chr3 (49-109)||(37249323-37249383)
chr3 (27-105)||(6956350-6956429)
chr3 (62-105)||(52032385-52032428)
chr3 (43-105)||(9368549-9368611)
chr3 (31-109)||(11026043-11026121)
chr3 (51-105)||(29686067-29686121)
chr3 (48-102)||(32306547-32306601)
chr3 (48-105)||(3469446-3469503)
chr3 (48-105)||(13948903-13948960)
chr3 (48-105)||(29118661-29118718)
chr3 (48-105)||(29118784-29118841)
chr3 (48-105)||(37778519-37778576)
chr3 (48-105)||(52032261-52032318)
chr3 (27-103)||(1078638-1078714)
chr3 (49-105)||(43105357-43105413)
chr3 (49-109)||(43105750-43105810)
chr3 (59-105)||(10294695-10294741)
chr3 (48-102)||(11910822-11910876)
chr3 (63-105)||(40788558-40788600)
chr3 (48-105)||(32306670-32306727)
chr3 (48-105)||(47551616-47551673)
chr3 (48-104)||(3596232-3596288)
chr3 (59-105)||(10307621-10307667)
chr3 (63-105)||(35759049-35759091)
chr3 (48-105)||(10294806-10294862)
chr3 (62-102)||(43998394-43998434)
chr3 (48-108)||(47857490-47857550)
chr3 (63-105)||(43608730-43608772)
chr3 (48-102)||(43998268-43998322)
chr3 (56-101)||(4322722-4322767)
chr3 (68-105)||(29686187-29686224)
chr3 (63-107)||(42855551-42855595)
[»] chr5 (23 HSPs)
chr5 (27-105)||(22870382-22870460)
chr5 (31-109)||(20072227-20072305)
chr5 (27-105)||(22869707-22869785)
chr5 (27-109)||(20857034-20857117)
chr5 (31-109)||(20072785-20072863)
chr5 (31-109)||(39181712-39181790)
chr5 (48-105)||(20153164-20153221)
chr5 (31-108)||(36476871-36476948)
chr5 (49-108)||(36477293-36477352)
chr5 (31-109)||(16533541-16533619)
chr5 (27-107)||(20857464-20857545)
chr5 (31-108)||(39181163-39181240)
chr5 (48-99)||(33871590-33871641)
chr5 (31-109)||(16532999-16533077)
chr5 (48-105)||(17544171-17544228)
chr5 (48-105)||(17544294-17544351)
chr5 (48-105)||(20153041-20153098)
chr5 (48-105)||(22298665-22298722)
chr5 (27-105)||(11741765-11741843)
chr5 (62-104)||(21287904-21287946)
chr5 (48-105)||(33871462-33871519)
chr5 (58-101)||(21257413-21257456)
chr5 (48-94)||(8875572-8875618)
[»] chr2 (21 HSPs)
chr2 (31-107)||(29957923-29957999)
chr2 (31-109)||(21103187-21103265)
chr2 (27-105)||(25623390-25623468)
chr2 (31-109)||(29958463-29958541)
chr2 (31-108)||(20983178-20983255)
chr2 (50-105)||(11830489-11830544)
chr2 (51-105)||(8710714-8710768)
chr2 (27-105)||(25624353-25624431)
chr2 (48-105)||(15604585-15604642)
chr2 (49-109)||(20982648-20982708)
chr2 (48-108)||(39936492-39936552)
chr2 (27-105)||(6588785-6588863)
chr2 (48-104)||(41587357-41587413)
chr2 (62-105)||(8710605-8710648)
chr2 (27-104)||(202605-202682)
chr2 (48-105)||(8342310-8342367)
chr2 (48-105)||(15604462-15604519)
chr2 (48-105)||(41588304-41588361)
chr2 (115-158)||(3653215-3653258)
chr2 (27-105)||(25230204-25230282)
chr2 (63-108)||(39935584-39935629)
[»] chr8 (32 HSPs)
chr8 (31-109)||(34213870-34213948)
chr8 (27-108)||(2534797-2534878)
chr8 (48-105)||(25124809-25124866)
chr8 (31-109)||(34214444-34214522)
chr8 (31-109)||(34665876-34665954)
chr8 (48-105)||(15230177-15230234)
chr8 (48-107)||(11761963-11762022)
chr8 (48-102)||(6471813-6471867)
chr8 (27-105)||(34177218-34177296)
chr8 (31-109)||(34666457-34666535)
chr8 (48-105)||(10445581-10445638)
chr8 (48-105)||(35634345-35634402)
chr8 (48-102)||(44664631-44664685)
chr8 (48-102)||(44664757-44664811)
chr8 (48-105)||(21432939-21432996)
chr8 (48-105)||(39474668-39474725)
chr8 (59-104)||(41353820-41353865)
chr8 (48-105)||(42945237-42945294)
chr8 (48-105)||(42945360-42945417)
chr8 (27-103)||(2535800-2535876)
chr8 (62-105)||(27500225-27500268)
chr8 (48-97)||(8997943-8997992)
chr8 (48-105)||(15230054-15230111)
chr8 (48-104)||(21432816-21432872)
chr8 (43-107)||(34176559-34176623)
chr8 (56-103)||(25124694-25124741)
chr8 (48-105)||(27500334-27500391)
chr8 (48-105)||(37542347-37542404)
chr8 (62-103)||(7983565-7983606)
chr8 (60-105)||(37542471-37542516)
chr8 (55-104)||(38003701-38003750)
chr8 (48-105)||(41353697-41353754)
[»] chr1 (31 HSPs)
chr1 (31-109)||(50062309-50062387)
chr1 (27-102)||(32132406-32132481)
chr1 (27-105)||(13295237-13295315)
chr1 (31-109)||(46282177-46282255)
chr1 (31-109)||(49093147-49093225)
chr1 (31-109)||(49093729-49093807)
chr1 (48-105)||(7371413-7371470)
chr1 (48-105)||(31058303-31058360)
chr1 (48-105)||(40714567-40714624)
chr1 (48-102)||(45750091-45750145)
chr1 (31-109)||(46282709-46282787)
chr1 (48-105)||(8898640-8898697)
chr1 (48-105)||(28324927-28324984)
chr1 (48-105)||(49955470-49955527)
chr1 (50-102)||(35038580-35038632)
chr1 (48-102)||(30326619-30326673)
chr1 (31-109)||(50062864-50062942)
chr1 (48-105)||(8898763-8898820)
chr1 (48-105)||(17189077-17189134)
chr1 (63-104)||(20760752-20760793)
chr1 (48-105)||(35040860-35040917)
chr1 (48-105)||(49955593-49955650)
chr1 (59-105)||(5734143-5734189)
chr1 (48-105)||(45749965-45750022)
chr1 (62-102)||(28325053-28325093)
chr1 (60-102)||(37929553-37929595)
chr1 (27-101)||(46899163-46899237)
chr1 (27-101)||(46899852-46899926)
chr1 (48-105)||(12905905-12905962)
chr1 (48-105)||(40714690-40714746)
chr1 (27-101)||(5734963-5735037)
[»] chr6 (30 HSPs)
chr6 (48-105)||(22503020-22503077)
chr6 (48-105)||(7905489-7905546)
chr6 (31-108)||(14657126-14657203)
chr6 (48-105)||(21836153-21836210)
chr6 (48-105)||(31407124-31407181)
chr6 (31-108)||(33400072-33400149)
chr6 (31-109)||(14656586-14656664)
chr6 (48-105)||(15913794-15913851)
chr6 (31-107)||(4117465-4117541)
chr6 (27-101)||(20651899-20651973)
chr6 (48-105)||(7160927-7160984)
chr6 (48-105)||(12065343-12065400)
chr6 (56-101)||(20651141-20651186)
chr6 (31-109)||(33401041-33401120)
chr6 (59-105)||(8089577-8089623)
chr6 (48-102)||(21836279-21836333)
chr6 (31-108)||(1661347-1661424)
chr6 (31-108)||(4116905-4116982)
chr6 (48-105)||(31407001-31407058)
chr6 (62-105)||(7905380-7905423)
chr6 (48-102)||(6517625-6517679)
chr6 (62-104)||(7161051-7161093)
chr6 (48-102)||(10781407-10781461)
chr6 (48-105)||(15913671-15913728)
chr6 (56-105)||(22502905-22502954)
chr6 (27-101)||(13379734-13379808)
chr6 (55-104)||(3176304-3176353)
chr6 (70-107)||(33400872-33400909)
chr6 (56-108)||(139924-139975)
chr6 (56-108)||(147945-147996)
[»] scaffold0328 (2 HSPs)
scaffold0328 (48-105)||(11386-11443)
scaffold0328 (48-105)||(11263-11320)
[»] scaffold0388 (2 HSPs)
scaffold0388 (48-104)||(12486-12542)
scaffold0388 (62-102)||(12376-12416)
[»] scaffold0775 (2 HSPs)
scaffold0775 (46-107)||(5083-5144)
scaffold0775 (43-104)||(6227-6288)
[»] scaffold0006 (2 HSPs)
scaffold0006 (48-105)||(221912-221969)
scaffold0006 (48-105)||(222035-222092)
[»] scaffold0042 (1 HSPs)
scaffold0042 (48-102)||(12029-12083)
[»] scaffold0771 (1 HSPs)
scaffold0771 (48-105)||(1043-1100)
[»] scaffold0128 (1 HSPs)
scaffold0128 (46-103)||(19978-20035)
[»] scaffold0599 (1 HSPs)
scaffold0599 (48-102)||(2516-2570)


Alignment Details
Target: chr7 (Bit Score: 106; Significance: 4e-53; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 43124369 - 43124244
Alignment:
Q  97 aaaatacccctggaattcatcctcttcttcttattgcccagaattcatagcttcatcatcttactgtccaaaaattcaacggtttttcatctagcatcct 196  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||    
T  43124369 aaaataccccctgaattcatcctcttcttcttattgcccagaattcatagcttcatcatcttacagtccaaaaattcaatgatttttcatctagcatcct 43124270  T
Q  197 agaaattgatcggttcatcatcttgc 222  Q
    ||||||||||||||||||||||||||    
T  43124269 agaaattgatcggttcatcatcttgc 43124244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 43124478 - 43124395
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgga 110  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43124478 aaatttcgtccctattcccagttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgga 43124395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 45914626 - 45914704
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45914626 aaatttcgtccctcttcccgattaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 45914704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 4226227 - 4226305
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||| | |||||  ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4226227 aaatttcgtccttcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 4226305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 27480093 - 27480171
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| ||||||  |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  27480093 ttcgtccctcttcccagataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 27480171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 47558132 - 47558210
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||| ||||| |||||||| || ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  47558132 aaatttcgtccctcttcccgattaatcactgtcacgtcatcaaattagcaaaatgtcatgggaatggataaaaataccc 47558210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 12643202 - 12643280
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||||||  |||| ||| |||||||||||||||||||    
T  12643202 aaatttcgtccctcttcccgattaatcactgccacgtcatcaaattagcttaatggcataggaatggacaaaaataccc 12643280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 22661463 - 22661541
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  22661463 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 22661541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 25628601 - 25628658
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25628601 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 25628658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 12644131 - 12644057
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaat 101  Q
    ||||||||||||| |||||  ||||||| |||||||||||||||||||||||||| |||| ||||| ||||||||    
T  12644131 aaatttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgagaatgaacaaaaat 12644057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 18087648 - 18087586
Alignment:
Q  43 cccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||| ||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18087648 cccacttaatgactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 18087586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 32934651 - 32934594
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  32934651 ttaatcactgtcacgacatcaaattagcaaaatgacatgggaatggacaaaaataccc 32934594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 5455929 - 5456007
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| ||||||  |||| ||||| | |||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  5455929 aaatttcatccctacacccacttaattactgccacatcatcaaattagcaaaatggcatgagaatggacaaaaataccc 5456007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 13384604 - 13384682
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||||  | || ||||| | | ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  13384604 aaatttcgtccctacactcacttaattactcccatgtcatcaaattaacaaaatgacatgggaatggacaaaaataccc 13384682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 18086391 - 18086469
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||||||||   |||| ||||| | ||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  18086391 aaatttcgtcccttgacccagttaattactgccatgtcatcaaattagcaaaatggcatggaaatggacaaaaataccc 18086469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 25453431 - 25453377
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    |||||||  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  25453431 ttaatcaccgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaata 25453377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 42618214 - 42618160
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||    
T  42618214 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaata 42618160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 4227170 - 4227093
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    ||||||||||||| || ||  ||||||| |||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  4227170 aaatttcgtccctctttccggttaatcactgccacatcataaaattagcaaaatggcatgagaatggacaaaaatacc 4227093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 10600252 - 10600195
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || || |||||||||||||||||||| |||||||||||||||||||||||    
T  10600252 ttaatcactgtcatgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 10600195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 23058724 - 23058675
Alignment:
Q  56 tgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  23058724 tgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 23058675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 32068219 - 32068276
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  32068219 ttaatcaatgccaagtcatcaaattagcaaaatggcatgggaaaggacaaaaataccc 32068276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 32068399 - 32068342
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  32068399 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaagaccc 32068342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 32688544 - 32688425
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctggaattcatcctcttcttc 126  Q
    |||||||||||||   |||| ||||| | |||||||||||||||||||||||||  ||||| ||| |||||||||||||       |||     ||||||    
T  32688544 aaatttcgtcccttgacccacttaataactgccacgtcatcaaattagcaaaattgcatggaaatagacaaaaataccc-------tca-----ttcttc 32688457  T
Q  127 ttattgcccagaattcatagcttcatcatctt 158  Q
    |||||| |||||||||||||||||||||||||    
T  32688456 ttattgtccagaattcatagcttcatcatctt 32688425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 42618034 - 42618091
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  42618034 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 42618091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 27480723 - 27480667
Alignment:
Q  49 taatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||    
T  27480723 taatcactaccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 27480667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 18855980 - 18855902
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||||||||   |||| ||||| | || ||||||||||||||||||||||  |||||||| ||||||||||||||    
T  18855980 aaatttcgtcccttaacccacttaatgactgacacgtcatcaaattagcaaaatagcatgggaaaggacaaaaataccc 18855902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 33808425 - 33808503
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||| |   |||| ||||||  |||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  33808425 aaatttcgtccattgacccagttaatcgctgccccgtcatcaaattagcaaaatgggatgggaatggacaaaaataccc 33808503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 46205601 - 46205555
Alignment:
Q  59 cacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||    
T  46205601 cacgtcatcaaattaggaaaatggcatgggaatggacaaaaataccc 46205555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 22081682 - 22081739
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| ||||| |||||||||||||| ||||| |||| ||||||||||||||||||    
T  22081682 ttaatcactgccaagtcatcaaattagcgaaatggcatgagaatggacaaaaataccc 22081739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 23058566 - 23058607
Alignment:
Q  62 gtcatcaaattagcaaaatgacatgggaatggacaaaaatac 103  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  23058566 gtcatcaaattagcaaaatgtcatgggaatggacaaaaatac 23058607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 25628781 - 25628724
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || || |||||||||||||||||||| ||||||||||||||||| |||||    
T  25628781 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaactaccc 25628724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 27138244 - 27138187
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||  |||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  27138244 ttaatcaccgccaagtcatcaaattaacaaaataacatgggaatggacaaaaataccc 27138187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 28890702 - 28890759
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || ||||||||||||||||||||||| ||||  |||||||||||||||||    
T  28890702 ttaatcactgtcacgtcatcaaattagcaaaatggcatgaaaatggacaaaaataccc 28890759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 32934471 - 32934528
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  32934471 ttaatcactaccaagtcatcaaattagcaaaatggcataggaatggacaaaaataccc 32934528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 43266555 - 43266514
Alignment:
Q  62 gtcatcaaattagcaaaatgacatgggaatggacaaaaatac 103  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  43266555 gtcatcaaattagcaaaatgacatgagaatggacaaaaatac 43266514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 25453251 - 25453307
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    ||||||| | ||| |||||||||||||||||| | ||||||||||||||||||||||    
T  25453251 ttaatcactaccaagtcatcaaattagcaaaaaggcatgggaatggacaaaaatacc 25453307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 22081862 - 22081811
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaa 99  Q
    ||||||||||||| |||||||||||||| |||||  ||||||||||||||||    
T  22081862 ttaatcattgccaagtcatcaaattagccaaatggtatgggaatggacaaaa 22081811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 12228519 - 12228565
Alignment:
Q  59 cacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  12228519 cacgtcatcaaattaacaaaatggcatgagaatggacaaaaataccc 12228565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 43266389 - 43266446
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || ||||||||||||||| |||||||  ||||||||| ||||||||||||    
T  43266389 ttaatcactgtcacgtcatcaaattaacaaaatggtatgggaatgaacaaaaataccc 43266446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 47559024 - 47558987
Alignment:
Q  68 aaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||||||||||||||| |||||||||||||||||    
T  47559024 aaattagcaaaatgacatggaaatggacaaaaataccc 47558987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 29144308 - 29144232
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatac 103  Q
    ||||||| || ||||| ||| ||||||| || ||  ||||||||||||||||||   ||||||||||||||||||||    
T  29144308 aaatttcatctctatttccagttaatcactgtcatctcatcaaattagcaaaattgtatgggaatggacaaaaatac 29144232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 32687515 - 32687575
Alignment:
Q  43 cccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatac 103  Q
    |||||| ||| | |||||| ||||||||||||||||||  ||||||||||||| |||||||    
T  32687515 cccaatcaatgactgccacttcatcaaattagcaaaattgcatgggaatggaccaaaatac 32687575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 39274994 - 39275045
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaa 100  Q
    ||||||| |||||||||||||||||||| ||||| |||| |||||||||||||    
T  39274994 ttaatcactgccacgtcatcaaattagc-aaatggcatgagaatggacaaaaa 39275045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 47945480 - 47945528
Alignment:
Q  57 gccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||| ||||||||||| ||||||| ||| |||||||||||||||||||    
T  47945480 gccacatcatcaaattaacaaaatggcataggaatggacaaaaataccc 47945528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 47950910 - 47950958
Alignment:
Q  57 gccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||| ||||||||||| ||||||| ||| |||||||||||||||||||    
T  47950910 gccacatcatcaaattaacaaaatggcataggaatggacaaaaataccc 47950958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 46204544 - 46204599
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatac 103  Q
    ||||||| ||| | ||||||||||||| |||||| |||||||||| ||||||||||    
T  46204544 ttaatcactgctaagtcatcaaattagtaaaatggcatgggaatgaacaaaaatac 46204599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 33828262 - 33828220
Alignment:
Q  63 tcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||| || ||||||| |||||||||||||||||||||||    
T  33828262 tcatcaaactaacaaaatggcatgggaatggacaaaaataccc 33828220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 6e-52; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 55867303 - 55867192
Alignment:
Q  111 attcatcctcttcttcttattgcccagaattcatagcttcatcatcttactgtccaaaaattcaacggtttttcatctagcatcctagaaattgatcggt 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  55867303 attcatcctcttcttcttattgcccagaattcatagcttcatcatcttacagtccaaaaattcaacggtttttcatctagcatcctagaaattgatcggt 55867204  T
Q  211 tcatcatcttgc 222  Q
    |||| |||||||    
T  55867203 tcattatcttgc 55867192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 23455689 - 23455607
Alignment:
Q  25 tcaaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccct 107  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23455689 tcaaatttcgtccctcttcccgattaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccct 23455607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 55867440 - 55867360
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccct 107  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  55867440 aaatttcgtccctattcccagttaatcactgccacgtcatcaaattagcaaaatgacattggaattgacaaaaatacccct 55867360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 23455056 - 23455134
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||| ||||||| ||||  |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23455056 aaattccgtccctcttcctgattaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 23455134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 56556688 - 56556766
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  56556688 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 56556766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 27069033 - 27069090
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27069033 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 27069090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 50503948 - 50504005
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50503948 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 50504005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 52816417 - 52816340
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  52816417 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctg 52816340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 38982572 - 38982512
Alignment:
Q  49 taatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  38982572 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 38982512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 147437 - 147495
Alignment:
Q  43 cccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaat 101  Q
    |||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||    
T  147437 cccaattaattactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaat 147495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 22718231 - 22718185
Alignment:
Q  59 cacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22718231 cacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 22718185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 27891707 - 27891761
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  27891707 ttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 27891761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 38813660 - 38813738
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| ||||||||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  38813660 ttcgtccctcttcccggataatcactgccacgtcttcaaattagcaaaatgacatgggaattgacaaaaatatccctgg 38813738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 38814321 - 38814243
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| ||||||||||||||||||||||||||||||| | || |||||||||||||||||    
T  38814321 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatgacatgagcattgacaaaaatacccctgg 38814243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 52815769 - 52815843
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  52815769 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 52815843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 32063641 - 32063584
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  32063641 ttaattattgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccc 32063584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 50504128 - 50504071
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  50504128 ttaatcactcccaagtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 50504071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 52573351 - 52573408
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  52573351 ttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccc 52573408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 56557319 - 56557242
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  56557319 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcataggaattgacaaaaatacccctg 56557242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 40316958 - 40316911
Alignment:
Q  58 ccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  40316958 ccacatcatcaaattagcaaaatgacatgggaatggacaaaaataccc 40316911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 40327032 - 40326985
Alignment:
Q  58 ccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  40327032 ccacatcatcaaattagcaaaatgacatgggaatggacaaaaataccc 40326985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 9731515 - 9731461
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||    
T  9731515 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatgaacaaaaata 9731461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 22986985 - 22987031
Alignment:
Q  59 cacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  22986985 cacgtcatcaaattagcaaaatgacatgggaatagacaaaaataccc 22987031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 10408192 - 10408135
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  10408192 ttaatcactgccacatcatcaaattagcaaaatgatatgagaatggacaaaaataccc 10408135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 27069213 - 27069156
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||  |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  27069213 ttaatcaccgccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 27069156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 39666899 - 39666956
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  39666899 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 39666956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 45463376 - 45463319
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  45463376 ttaatcactaccacgtcatcaaattagcaaaatggcatgggaatggacaaaaacaccc 45463319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 51859530 - 51859587
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  51859530 ttaatcactgccacatcatcaaattagcaaaatggcatgagaatggacaaaaataccc 51859587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 52573531 - 52573474
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  52573531 ttaatcactgccacgtcatcaaattagcaatatggcatgagaatggacaaaaataccc 52573474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 54858683 - 54858740
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| ||||||||  |||||||||||||    
T  54858683 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaacagacaaaaataccc 54858740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 11448055 - 11447975
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccct 107  Q
    |||||||||| ||||| ||| ||||||| |||||| ||||||||||| ||||||| ||||  ||| |||||||||||||||    
T  11448055 aaatttcgtcactatttccagttaatcactgccacatcatcaaattaacaaaatggcatgaaaattgacaaaaatacccct 11447975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 39667079 - 39667023
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    |||||||  ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  39667079 ttaatcaccgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaatacc 39667023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 30641651 - 30641697
Alignment:
Q  59 cacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  30641651 cacgtcatcaaattagcaaaatgtcatgggaatggacaaaattaccc 30641697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 39701043 - 39701089
Alignment:
Q  59 cacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  39701043 cacgtcatcaaattagcaaaatggcatgggaatggacaaaaacaccc 39701089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 10408012 - 10408069
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  10408012 ttaatcactaccaagtcatcaaattagcaaaatggcatggaaatggacaaaaataccc 10408069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 11524072 - 11524129
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||  ||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  11524072 ttaatcatcaccaagtcatcaaattagcaaaatggcatgggaatagacaaaaataccc 11524129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 39701212 - 39701155
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| ||||| |||||||||||||||||||   ||||||||||||||||||||||    
T  39701212 ttaatcactgccaagtcatcaaattagcaaaatagtatgggaatggacaaaaataccc 39701155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 45463196 - 45463253
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||  |||||||||||||||||||||||    
T  45463196 ttaatcactaccaagtcatcaaattagcaaaatagcatgggaatggacaaaaataccc 45463253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 54858863 - 54858806
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| |||| ||||||||||||||||||    
T  54858863 ttaatcactaccaagtcatcaaattagcaaaatggcatgtgaatggacaaaaataccc 54858806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 51859709 - 51859658
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaa 99  Q
    ||||||| | ||| |||||||||||||||||||| |||||||||||||||||    
T  51859709 ttaatcactcccaagtcatcaaattagcaaaatggcatgggaatggacaaaa 51859658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 3032705 - 3032760
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatac 103  Q
    |||||||  |||| || ||||||||||||||||| ||| |||||||||||||||||    
T  3032705 ttaatcaccgccaagttatcaaattagcaaaatggcataggaatggacaaaaatac 3032760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 39538201 - 39538260
Alignment:
Q  46 aattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||  || ||||||||||||||||||||||||||||  | || ||||||||||||    
T  39538201 aattaatcgctgtcacgtcatcaaattagcaaaatgacatgtaattgaacaaaaataccc 39538260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 148081 - 148007
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaat 101  Q
    ||||||||||| |   |||| ||||| | || ||||||||||||||||||||||| ||||  |||||||||||||    
T  148081 aaatttcgtccatgagcccagttaattactgtcacgtcatcaaattagcaaaatggcatgaaaatggacaaaaat 148007  T

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Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 5818078 - 5818024
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| || || ||| |||||||||||||||| ||||||||| ||||||||||    
T  5818078 ttaatcactgtcaagtcttcaaattagcaaaatggcatgggaatagacaaaaata 5818024  T

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Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 11524232 - 11524198
Alignment:
Q  68 aaattagcaaaatgacatgggaatggacaaaaata 102  Q
    |||||||||||||| ||||||||||||||||||||    
T  11524232 aaattagcaaaatggcatgggaatggacaaaaata 11524198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 50751795 - 50751750
Alignment:
Q  56 tgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaat 101  Q
    |||||| ||||||||||| ||||||  |||||||||||||||||||    
T  50751795 tgccacatcatcaaattaacaaaatagcatgggaatggacaaaaat 50751750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 32717103 - 32717023
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccct 107  Q
    ||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32717103 aaatttcgtccctcttcccaattaattactgccacgtcatcaaattagcaaaatgacataggaatggacaaaaatacccct 32717023  T

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Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 32716351 - 32716429
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||| ||||  |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32716351 aaatttcgtccctcttccagattaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 32716429  T

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Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 45279278 - 45279200
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45279278 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 45279200  T

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Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 2944660 - 2944582
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  2944660 ttcgtccctcttcccgaataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 2944582  T

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Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 29192137 - 29192215
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||| |||| |||||||||||||    
T  29192137 aaatttcgtccctcttcccgattaatcactgccacgtcattaaattagcaaaatgacatgagaattgacaaaaataccc 29192215  T

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Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 29192991 - 29192913
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||| |||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||    
T  29192991 aaattttgtccctcttcccgattaatcactgtcacgtcatcaaattagcaaaatgacatgggaattgacaaaaataccc 29192913  T

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Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 2944019 - 2944096
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||||||| |||||  ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  2944019 ttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctg 2944096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 1756656 - 1756734
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  1756656 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 1756734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 37249792 - 37249714
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  37249792 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 37249714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 45278650 - 45278728
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  45278650 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 45278728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 48189093 - 48189015
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  48189093 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 48189015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 3596412 - 3596355
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  3596412 ttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 3596355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 35643974 - 35644031
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35643974 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 35644031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 40788723 - 40788666
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40788723 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 40788666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 41422095 - 41422152
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  41422095 ttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 41422152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 48188484 - 48188561
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  48188484 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatgccatgggaattgacaaaaatacccctg 48188561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 11026607 - 11026549
Alignment:
Q  50 aatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  11026607 aatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctg 11026549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 3469323 - 3469380
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3469323 ttaatcacggccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 3469380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 1757280 - 1757220
Alignment:
Q  49 taatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    |||||| |||||||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  1757280 taatcactgccacgtcatcaaattagcaaaatggcatgagaattgacaaaaatacccctgg 1757220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 37249323 - 37249383
Alignment:
Q  49 taatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    |||||| |||||||||||||||||||||||||| ||||| ||| |||||||||||||||||    
T  37249323 taatcactgccacgtcatcaaattagcaaaatggcatggaaattgacaaaaatacccctgg 37249383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 6956350 - 6956429
Alignment:
Q  27 aaatttcgtccctattcccaatt-aatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||||  |||| || ||| | ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  6956350 aaatttcgtccctacacccactttaattactgccacgtcataaaattaacaaaatgacatgggaatggacaaaaataccc 6956429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 52032428 - 52032385
Alignment:
Q  62 gtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  52032428 gtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 52032385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 9368611 - 9368549
Alignment:
Q  43 cccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||| ||||| |||||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  9368611 cccacttaatgattgccacgtcatcaaattaacaaaatggcatgagaatggacaaaaataccc 9368549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 11026043 - 11026121
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||  ||||||| ||||| |||||||||||||||||||  ||||| ||| |||||||||||||||||    
T  11026043 ttcgtccctcttcccggttaatcactgccatgtcatcaaattagcaaaatcgcatggaaattgacaaaaatacccctgg 11026121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 29686067 - 29686121
Alignment:
Q  51 atcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||| |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  29686067 atcactgccacgtcatcaaattagcaaaatggcatgggaatggagaaaaataccc 29686121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 32306547 - 32306601
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||||||||||||    
T  32306547 ttaatcactaccacgtcatcaaattagcaaaatgacttgggaatggacaaaaata 32306601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 3469503 - 3469446
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  3469503 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 3469446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 13948903 - 13948960
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || || |||||||||||||||||||| |||||||||||||||||||||||    
T  13948903 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 13948960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 29118661 - 29118718
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || || |||||||||||||||||||| |||||||||||||||||||||||    
T  29118661 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 29118718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 29118841 - 29118784
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  29118841 ttaatcactgccacgtcatcacattagcaaaatggcatgggaatagacaaaaataccc 29118784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 37778576 - 37778519
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||| |||| |||||||||||||    
T  37778576 ttaatcactgccacgtcatcaaattagcaaaatggcatgagaatagacaaaaataccc 37778519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 52032261 - 52032318
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  52032261 ttaatcactaccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 52032318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 1078638 - 1078714
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatac 103  Q
    ||||||||||||||  |||| ||||| |||| || |||||||||||||||| ||| || ||||||||||||||||||    
T  1078638 aaatttcgtccctacacccatttaattattgtcatgtcatcaaattagcaagatggcacgggaatggacaaaaatac 1078714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 43105357 - 43105413
Alignment:
Q  49 taatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  43105357 taatcactgccatgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 43105413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 43105810 - 43105750
Alignment:
Q  49 taatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    |||||| | |||||||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  43105810 taatcactaccacgtcatcaaattagcaaaatggcattggaattgacaaaaatacccctgg 43105750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 10294695 - 10294741
Alignment:
Q  59 cacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  10294695 cacgtcatcaaattagcaaaatgacatggaaatgtacaaaaataccc 10294741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 11910822 - 11910876
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| | |||||| ||||||||||||||||| ||||||||||||||||||||    
T  11910822 ttaatcactaccacgttatcaaattagcaaaatggcatgggaatggacaaaaata 11910876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 40788558 - 40788600
Alignment:
Q  63 tcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  40788558 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 40788600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 32306727 - 32306670
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  32306727 ttaatcactaccaagtcatcaaattagcaaaatggcataggaatggacaaaaataccc 32306670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 47551616 - 47551673
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||| ||||||||||||||||||| ||||| ||||||||||| |||||    
T  47551616 ttaatcactgccacatcatcaaattagcaaaatggcatggaaatggacaaaattaccc 47551673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 3596232 - 3596288
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    ||||||| | ||| |||||||||||||||||||| |||| |||||||||||||||||    
T  3596232 ttaatcactaccatgtcatcaaattagcaaaatggcatgagaatggacaaaaatacc 3596288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 10307667 - 10307621
Alignment:
Q  59 cacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||| |||||||||||||  |||||||||||||||||||||||    
T  10307667 cacgtcataaaattagcaaaattgcatgggaatggacaaaaataccc 10307621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 35759091 - 35759049
Alignment:
Q  63 tcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  35759091 tcatcaaattagcaaaatggcatgagaatggacaaaaataccc 35759049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 10294862 - 10294806
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| ||||| |||||||||||| |||| || |||||||||||||||||||||||    
T  10294862 ttaatcactgccaagtcatcaaattaccaaa-tggcatgggaatggacaaaaataccc 10294806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 43998434 - 43998394
Alignment:
Q  62 gtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  43998434 gtcatcaaattagcaaaatgccatgagaatggacaaaaata 43998394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 47857550 - 47857490
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||||| ||||||||||| |||||||||||||  ||| |||| ||||||| |||||||||    
T  47857550 ttaatcaatgccacgtcataaaattagcaaaatagcataggaaaggacaaatatacccctg 47857490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 43608772 - 43608730
Alignment:
Q  63 tcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||    
T  43608772 tcatcaaattagcaagatggcatggaaatggacaaaaataccc 43608730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 43998268 - 43998322
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| | ||| ||||||||||| |||||||| ||||||||||| ||||||||    
T  43998268 ttaatcactaccaagtcatcaaattcgcaaaatggcatgggaatggtcaaaaata 43998322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 4322722 - 4322767
Alignment:
Q  56 tgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaat 101  Q
    |||||| ||||||||||| ||||||  |||||||||||||||||||    
T  4322722 tgccacatcatcaaattaacaaaatagcatgggaatggacaaaaat 4322767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 29686224 - 29686187
Alignment:
Q  68 aaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  29686224 aaattagcaaaatggcatggaaatggacaaaaataccc 29686187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 42855595 - 42855551
Alignment:
Q  63 tcatcaaattagcaaaatgacatgggaatggacaaaaatacccct 107  Q
    ||||||||||||||||||| | |||||| ||| ||||||||||||    
T  42855595 tcatcaaattagcaaaatggcttgggaaaggataaaaatacccct 42855551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 22870460 - 22870382
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22870460 aaatttcgtctctcttcccgattaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 22870382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 20072227 - 20072305
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| ||||||  |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  20072227 ttcgtccctcttcccagataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 20072305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 22869707 - 22869785
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||| |||||  ||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  22869707 aaatttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccc 22869785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 20857034 - 20857117
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagc-aaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||||||| |||||  ||||||| |||||||||||||||||||| |||||| ||||||||| |||||||||||||||||    
T  20857034 aaatttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaaatggcatgggaattgacaaaaatacccctgg 20857117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 20072863 - 20072785
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  20072863 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 20072785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 39181790 - 39181712
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  39181790 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 39181712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 20153221 - 20153164
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20153221 ttaatcactgctacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 20153164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 36476871 - 36476948
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||||||| ||||||  |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  36476871 ttcgtccctcttcccagataatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaatacccctg 36476948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 36477352 - 36477293
Alignment:
Q  49 taatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    |||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  36477352 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctg 36477293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 16533619 - 16533541
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| ||||||||||| |||||||||||||| ||||||||| |||||||||||||||||    
T  16533619 ttcgtccctcttcccggataatcactgccacgtcattaaattagcaaaatggcatgggaattgacaaaaatacccctgg 16533541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 20857545 - 20857464
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagc-aaaatgacatgggaatggacaaaaatacccct 107  Q
    ||||||||||||| |||||  ||||||| |||||| ||||||||||||| |||||| ||||||||| |||||||||||||||    
T  20857545 aaatttcgtccctcttcccggttaatcactgccacctcatcaaattagcaaaaatggcatgggaattgacaaaaatacccct 20857464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 39181163 - 39181240
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||||||| |||||   |||||| | |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  39181163 ttcgtccctcttcccggataatcactaccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctg 39181240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 33871641 - 33871590
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaa 99  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  33871641 ttaatcactgctacgtcatcaaattagcaaaatgacatgggaatggacaaaa 33871590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 16532999 - 16533077
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| ||||||||||| |||||||||||||| |||||||||  ||||||||||||||||    
T  16532999 ttcgtccctcttcccggataatcactgccacgtcattaaattagcaaaatggcatgggaattcacaaaaatacccctgg 16533077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 17544171 - 17544228
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || || |||||||||||||||||||| |||||||||||||||||||||||    
T  17544171 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 17544228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 17544351 - 17544294
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || || |||||||||||||||||||| |||||||||||||||||||||||    
T  17544351 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 17544294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 20153041 - 20153098
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  20153041 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 20153098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 22298665 - 22298722
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||||    
T  22298665 ttaatcactaccaagtcatcaaattagcaaaatgacatgggaattgacaaaaataccc 22298722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 11741843 - 11741765
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||| |   |||| ||||||| || || |||||||||||||||||||| ||| |||||||||||||||||||    
T  11741843 aaatttcgtcctttgacccagttaatcactgtcaggtcatcaaattagcaaaatggcattggaatggacaaaaataccc 11741765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 21287946 - 21287904
Alignment:
Q  62 gtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  21287946 gtcatcaaattagcaaaatggcatgggaatggacaaaaatacc 21287904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 33871462 - 33871519
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||  |||| ||||||||| |||||||||| ||||| |||||||||||||||||    
T  33871462 ttaatcaccgccaagtcatcaaactagcaaaatggcatggaaatggacaaaaataccc 33871519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 21257456 - 21257413
Alignment:
Q  58 ccacgtcatcaaattagcaaaatgacatgggaatggacaaaaat 101  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||    
T  21257456 ccacatcatcaaattagcaaaatggcatgagaatggacaaaaat 21257413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 8875572 - 8875618
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatgga 94  Q
    ||||||| ||||||||||||||||||| |||||| ||| ||||||||    
T  8875572 ttaatcactgccacgtcatcaaattagtaaaatggcataggaatgga 8875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 29957923 - 29957999
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccct 107  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  29957923 ttcgtccctcttcccggttaatcattgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccct 29957999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 21103187 - 21103265
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  21103187 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 21103265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 25623390 - 25623468
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||| | |||  ||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  25623390 aaatttcgtccctctacccggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 25623468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 29958541 - 29958463
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    |||||| || |||||  ||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  29958541 ttcgtctctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 29958463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 20983255 - 20983178
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  20983255 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctg 20983178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 11830489 - 11830544
Alignment:
Q  50 aatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11830489 aatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 11830544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 8710768 - 8710714
Alignment:
Q  51 atcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8710768 atcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 8710714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 25624431 - 25624353
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||| | |||  ||||||| |||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  25624431 aaatttcgtccctctacccggttaatcactgccacatcatcaaattaacaaaatggcatgggaatggacaaaaataccc 25624353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 15604642 - 15604585
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  15604642 ttaatcactgccccgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 15604585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 20982648 - 20982708
Alignment:
Q  49 taatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    |||||| ||||||||||||||||||||||||||  |||||||| |||||||||||||||||    
T  20982648 taatcactgccacgtcatcaaattagcaaaatggtatgggaattgacaaaaatacccctgg 20982708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 39936552 - 39936492
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||    
T  39936552 ttaatcaatgccacgtcatcaaattagcaaaatggcatggaaaaggacaaaaatacccctg 39936492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 6588785 - 6588863
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||| |   |||| || |||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  6588785 aaatttcgtcctttgacccagttgatcactgccaggtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 6588863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 41587357 - 41587413
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    ||||||| || ||||||||||||||||||||||  ||||||||||||||||||||||    
T  41587357 ttaatcactgtcacgtcatcaaattagcaaaattgcatgggaatggacaaaaatacc 41587413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 8710605 - 8710648
Alignment:
Q  62 gtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  8710605 gtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 8710648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 202682 - 202605
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    ||||||||||||||  |||| ||||| | | |||||| ||||||||||||||||| |||| |||| ||||||||||||    
T  202682 aaatttcgtccctacacccacttaattactcccacgttatcaaattagcaaaatggcatgagaatagacaaaaatacc 202605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 8342310 - 8342367
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  8342310 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 8342367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 15604462 - 15604519
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  15604462 ttaatcactaccaagtcatgaaattagcaaaatggcatgggaatggacaaaaataccc 15604519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 41588361 - 41588304
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| ||||| |||||||||||||||||||| ||||| ||| |||||||||||||    
T  41588361 ttaatcactgccaagtcatcaaattagcaaaatggcatggaaattgacaaaaataccc 41588304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 3653258 - 3653215
Alignment:
Q  115 atcctcttcttcttattgcccagaattcatagcttcatcatctt 158  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  3653258 atcctcttcttcttgtcgcccagaattcatagcttcatcatctt 3653215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 25230204 - 25230282
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||||||||   |||| ||||| | |||||| |||||| ||| |||||||| |||| ||||||||||||||||||    
T  25230204 aaatttcgtccctgagcccagttaattactgccacatcatcagattggcaaaatggcatgcgaatggacaaaaataccc 25230282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 39935584 - 39935629
Alignment:
Q  63 tcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||||||||||||||||||||||| ||   |||||||||||||||    
T  39935584 tcatcaaattagcaaaatgacatggaaaataacaaaaatacccctg 39935629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 34213870 - 34213948
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||  ||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  34213870 ttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 34213948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 2534797 - 2534878
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  |||| ||| ||||||||||||||||    
T  2534797 aaatttcgtccctattcccagttaatcactgccacatcatcaaattagcaaaatggtatggaaattgacaaaaatacccctg 2534878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 25124866 - 25124809
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25124866 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 25124809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 34214522 - 34214444
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| ||||| | |||||| |||||| ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  34214522 ttcgtccctcttcccgaataatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 34214444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 34665876 - 34665954
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  34665876 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 34665954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 15230234 - 15230177
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15230234 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 15230177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 11761963 - 11762022
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccct 107  Q
    ||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  11761963 ttaatcactgccacgtcatcaaattagcaaaatagcatgggaatggacaaaaatacccct 11762022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 6471813 - 6471867
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  6471813 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggataaaaata 6471867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 34177296 - 34177218
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||||||||   |||| ||||| | |||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  34177296 aaatttcgtcccttgacccacttaatgactgccacatcatcaaattagcaaaatggcatgggaatggacaaaaataccc 34177218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 34666535 - 34666457
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  34666535 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgagaattgacaaaaatacccctgg 34666457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 10445638 - 10445581
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10445638 ttaatcactgccacgtcatcaaattagcaaaatggcatggaaatggacaaaaataccc 10445581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 35634402 - 35634345
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||    
T  35634402 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 35634345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 44664631 - 44664685
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| |||||||||||||||||||||||||| || |||||||||||||||||    
T  44664631 ttaatcactgccacgtcatcaaattagcaaaatggcacgggaatggacaaaaata 44664685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 44664811 - 44664757
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||    
T  44664811 ttaatcattgccaagtcatcagattagcaaaatggcatgggaatggacaaaaata 44664757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 21432996 - 21432939
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  21432996 ttaatcactgacacgttatcaaattagcaaaatgacatgggaatggataaaaataccc 21432939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 39474668 - 39474725
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||| ||||||||||||||||||| ||||| |||||||||||||||||    
T  39474668 ttaatcactgccacatcatcaaattagcaaaatggcatggaaatggacaaaaataccc 39474725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 41353865 - 41353820
Alignment:
Q  59 cacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  41353865 cacgtcatcaaattagcaaaatgacatgagaatggacaaaaatacc 41353820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 42945237 - 42945294
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| ||||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  42945237 ttaatcactgccaagtcatcaaattagtaaaatggcatgggaatggacaaaaataccc 42945294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 42945417 - 42945360
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| ||||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  42945417 ttaatcactgccaagtcatcaaattagtaaaatggcatgggaatggacaaaaataccc 42945360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 2535876 - 2535800
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatac 103  Q
    |||||||||||||   |||| ||||| | |||||| |||||||||||| |||||| |||||||||||||||||||||    
T  2535876 aaatttcgtcccttgacccacttaatgactgccacatcatcaaattagtaaaatggcatgggaatggacaaaaatac 2535800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 27500225 - 27500268
Alignment:
Q  62 gtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  27500225 gtcatcaaattagcaaaatgacatgagaatggacaaaaataccc 27500268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 8997992 - 8997943
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaa 97  Q
    ||||||| || ||||||||||||||||||||||| |||||||||||||||    
T  8997992 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaa 8997943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 15230054 - 15230111
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| || ||||||||||||||||| |||||||||||||||||||||||    
T  15230054 ttaatcactaccaagttatcaaattagcaaaatggcatgggaatggacaaaaataccc 15230111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 21432816 - 21432872
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    ||||||| | ||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  21432816 ttaatcactcccaagtcatcaaattagcaaaatggcatggaaatggacaaaaatacc 21432872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 34176559 - 34176623
Alignment:
Q  43 cccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccct 107  Q
    |||| ||||||| || || |||||||||||||||||||| | |||||| ||||||||||||||||    
T  34176559 cccagttaatcactgtcaggtcatcaaattagcaaaatggcttgggaaaggacaaaaatacccct 34176623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 25124694 - 25124741
Alignment:
Q  56 tgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatac 103  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  25124694 tgccaagtcatcaaattagcaaaatgatatgggaattgacaaaaatac 25124741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 27500391 - 27500334
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || |||||||||||||||| |||||  ||||||||||| |||||||||||    
T  27500391 ttaatcactgtcacgtcatcaaattagaaaaattgcatgggaatgggcaaaaataccc 27500334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 37542347 - 37542404
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||  |||| |||||||||||| ||||||| |||||||||| ||||||||||||    
T  37542347 ttaatcaccgccaagtcatcaaattaacaaaatggcatgggaatgaacaaaaataccc 37542404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 7983565 - 7983606
Alignment:
Q  62 gtcatcaaattagcaaaatgacatgggaatggacaaaaatac 103  Q
    ||||||||||||| |||||||||||  |||||||||||||||    
T  7983565 gtcatcaaattagaaaaatgacatgaaaatggacaaaaatac 7983606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 37542516 - 37542471
Alignment:
Q  60 acgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||  |||||||||||||||||  ||||||||||||||||||    
T  37542516 acgtcattgaattagcaaaatgacattagaatggacaaaaataccc 37542471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 38003750 - 38003701
Alignment:
Q  55 ttgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    ||||||| | ||||||||||||||||| |||| |||| ||||||||||||    
T  38003750 ttgccacattatcaaattagcaaaatggcatgagaatagacaaaaatacc 38003701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 41353697 - 41353754
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| || ||||||||| |||||||||||| ||||||||||| ||||||    
T  41353697 ttaatcactaccaagttatcaaattaacaaaatgacatgagaatggacaaatataccc 41353754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 50062309 - 50062387
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  50062309 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatgacatgggaattgacaaaaatacccctgg 50062387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 32132406 - 32132481
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||||||||||  |||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||||||    
T  32132406 aaatttcgtccctacacccacttaattactgccacgtcatcaaattagcaaaatgtcatgggaatggacaaaaata 32132481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 13295237 - 13295315
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||| |||||||| |||||  ||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  13295237 aaatgtcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatgacatggaaatagacaaaaataccc 13295315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 46282177 - 46282255
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  46282177 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 46282255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 49093147 - 49093225
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  49093147 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 49093225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 49093807 - 49093729
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  49093807 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 49093729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 7371413 - 7371470
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7371413 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 7371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 31058360 - 31058303
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31058360 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 31058303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 40714567 - 40714624
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40714567 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 40714624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 45750145 - 45750091
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  45750145 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaata 45750091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 46282787 - 46282709
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| |||||| ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  46282787 ttcgtccctcttcccggataatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaatacccctgg 46282709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 8898640 - 8898697
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||    
T  8898640 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 8898697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 28324927 - 28324984
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  28324927 ttaatcactgccacgtcatcaaattagcaaaatggcatggaaatggacaaaaataccc 28324984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 49955470 - 49955527
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  49955470 ttaatcactgccacatcatcaaattagcaaaatggcatgggaatggacaaaaataccc 49955527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 35038580 - 35038632
Alignment:
Q  50 aatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  35038580 aatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaata 35038632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 30326619 - 30326673
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||||||||||||    
T  30326619 ttaatcactaccaagtcatcaaattagcaaaatgacatgggaatggacaaaaata 30326673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 50062942 - 50062864
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||   |||||| || ||||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  50062942 ttcgtccctcttcccggataatcactgtcacgtcatcaaattagcaaaatggcatgagaattgacaaaaatacccctgg 50062864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 8898820 - 8898763
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  8898820 ttaatcactaccaagtcatcaaattagcaaaatgacacgggaatggacaaaaataccc 8898763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 17189077 - 17189134
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  17189077 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 17189134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 20760793 - 20760752
Alignment:
Q  63 tcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20760793 tcatcaaattagcaaaatgacatgggaatggacaaaaatacc 20760752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 35040917 - 35040860
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  35040917 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 35040860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 49955650 - 49955593
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||  |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  49955650 ttaatcaccgccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 49955593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 5734143 - 5734189
Alignment:
Q  59 cacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  5734143 cacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 5734189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 45749965 - 45750022
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| |||| ||||||||||||||||||    
T  45749965 ttaatcactaccaagtcatcaaattagcaaaatggcatgagaatggacaaaaataccc 45750022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 28325093 - 28325053
Alignment:
Q  62 gtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  28325093 gtcatcaaattagcaaaatgacataggaatggacaaaaata 28325053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 37929553 - 37929595
Alignment:
Q  60 acgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  37929553 acgtcatcaaattagcaaaatggcatgagaatggacaaaaata 37929595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 46899163 - 46899237
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaat 101  Q
    |||||||||||||   |||| ||||| | |||||| ||||||||| | ||||||| |||||||||||||||||||    
T  46899163 aaatttcgtccctgagcccagttaattactgccacatcatcaaataaacaaaatggcatgggaatggacaaaaat 46899237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 46899926 - 46899852
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaat 101  Q
    |||||||||||||   |||| ||||| | || |||||||||||||||| |||||| |||||||||| ||||||||    
T  46899926 aaatttcgtccctgagcccagttaattactgtcacgtcatcaaattagtaaaatggcatgggaatgaacaaaaat 46899852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 12905962 - 12905905
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || || |||||||||||| ||||||| |||| ||||||||||||||||||    
T  12905962 ttaatcactgtcaagtcatcaaattaacaaaatggcatgagaatggacaaaaataccc 12905905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 40714746 - 40714690
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  40714746 ttaatcactaccaagtcatcaaattagcaaaatggcat-ggaatggacaaaaataccc 40714690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 5735037 - 5734963
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaat 101  Q
    |||||||||||||   |||| ||||| | || ||||||||||||||| ||||||| |||| |||| |||||||||    
T  5735037 aaatttcgtccctgagcccagttaattactgtcacgtcatcaaattaacaaaatggcatgagaatagacaaaaat 5734963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 22503077 - 22503020
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22503077 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 22503020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 7905546 - 7905489
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7905546 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 7905489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 14657203 - 14657126
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  14657203 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctg 14657126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 21836153 - 21836210
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21836153 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 21836210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 31407181 - 31407124
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  31407181 ttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 31407124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 33400072 - 33400149
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||||||| |||||   |||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  33400072 ttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacccctg 33400149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 14656586 - 14656664
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctgg 109  Q
    ||||||||| |||||  ||||||| ||||| ||||||||||||| |||||| ||||||||| |||||||||||||||||    
T  14656586 ttcgtccctcttcccggttaatcactgccatgtcatcaaattagtaaaatggcatgggaattgacaaaaatacccctgg 14656664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 15913851 - 15913794
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||    
T  15913851 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 15913794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 4117541 - 4117465
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccct 107  Q
    ||||||||| ||| |  ||||||| |||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  4117541 ttcgtccctcttctcggttaatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaatacccct 4117465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 20651973 - 20651899
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaat 101  Q
    |||||||||||||   |||| ||||| | ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  20651973 aaatttcgtccctgaacccagttaattactgccacgtcattaaattagcaaaatgacatgggaatggataaaaat 20651899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 7160927 - 7160984
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||    
T  7160927 ttaatcactaccacgtcatcaaattagcaaaatagcatgggaatggacaaaaataccc 7160984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 12065343 - 12065400
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || || |||||||||||||||||||| |||||||||||||||||||||||    
T  12065343 ttaatcactgtcaggtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 12065400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 20651141 - 20651186
Alignment:
Q  56 tgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaat 101  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  20651141 tgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaat 20651186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 33401120 - 33401041
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaa-tgacatgggaatggacaaaaatacccctgg 109  Q
    ||||| ||| |||||  |||| || |||||||||||||||||||||||| || ||||||||| |||||||||||||||||    
T  33401120 ttcgtacctcttcccggttaaccactgccacgtcatcaaattagcaaaaatggcatgggaattgacaaaaatacccctgg 33401041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 8089577 - 8089623
Alignment:
Q  59 cacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  8089577 cacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 8089623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 21836333 - 21836279
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| ||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  21836333 ttaatcactgccaagtcatcaaattaacaaaatggcatgggaatggacaaaaata 21836279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 1661424 - 1661347
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||||||| |||||   |||||| | |||| ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  1661424 ttcgtccctcttcccggataatcacttccacttcatcaaattatcaaaatggcatgggaattgacaaaaatacccctg 1661347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 4116905 - 4116982
Alignment:
Q  31 ttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    ||||||||| ||| |  ||||||| |||||| | ||||||||||||||||| | ||||||| ||||||||||||||||    
T  4116905 ttcgtccctcttctcggttaatcactgccacattatcaaattagcaaaatggcgtgggaattgacaaaaatacccctg 4116982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 31407001 - 31407058
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  31407001 ttaatcactcccaagtcatcaaattagcaaaatggcatggaaatggacaaaaataccc 31407058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 7905380 - 7905423
Alignment:
Q  62 gtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  7905380 gtcatcaaattagcaaaatggcacgggaatggacaaaaataccc 7905423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 6517625 - 6517679
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| | ||| |||||||||||||||||||| |||||||||| |||||||||    
T  6517625 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatgaacaaaaata 6517679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 7161093 - 7161051
Alignment:
Q  62 gtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  7161093 gtcatcaaattagcaaaattgcatgggaatggacaaaaatacc 7161051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 10781461 - 10781407
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| | ||| ||||||||||| |||||||| ||||||||||||||||||||    
T  10781461 ttaatcactaccaagtcatcaaattcgcaaaatggcatgggaatggacaaaaata 10781407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 15913671 - 15913728
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| | ||| |||||||||||||||||||| ||||| ||| |||||||||||||    
T  15913671 ttaatcactaccaagtcatcaaattagcaaaatggcatggaaattgacaaaaataccc 15913728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 22502905 - 22502954
Alignment:
Q  56 tgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||| ||||||||||||||||||||  ||| ||||||||||||||||||    
T  22502905 tgccaagtcatcaaattagcaaaatggtatgagaatggacaaaaataccc 22502954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 13379808 - 13379734
Alignment:
Q  27 aaatttcgtccctattcccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaat 101  Q
    |||||||||||||   |||| ||||| | || || ||||||||||||||||||||   |||||||||||||||||    
T  13379808 aaatttcgtccctgagcccagttaattactgtcatgtcatcaaattagcaaaatggtttgggaatggacaaaaat 13379734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 3176353 - 3176304
Alignment:
Q  55 ttgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    ||||||||||||||||||| ||||||   ||| |||||||||||||||||    
T  3176353 ttgccacgtcatcaaattaccaaaatagtatgagaatggacaaaaatacc 3176304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 33400909 - 33400872
Alignment:
Q  70 attagcaaaatgacatgggaatggacaaaaatacccct 107  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  33400909 attagcaaaatggcatgggaattgacaaaaatacccct 33400872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 139924 - 139975
Alignment:
Q  56 tgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    |||||||||||||||||||||||||||| ||  || || ||||||||||||||    
T  139924 tgccacgtcatcaaattagcaaaatgacgtgaaaaagg-caaaaatacccctg 139975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 147945 - 147996
Alignment:
Q  56 tgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccctg 108  Q
    |||||||||||||||||||||||||||| ||  || || ||||||||||||||    
T  147945 tgccacgtcatcaaattagcaaaatgacgtgaaaaagg-caaaaatacccctg 147996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 11443 - 11386
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11443 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 11386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 11263 - 11320
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  11263 ttaatcactgccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 11320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 12542 - 12486
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12542 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatagacaaaaatacc 12486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 12376 - 12416
Alignment:
Q  62 gtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  12376 gtcatcaaattagcaaaatgacatggaaatggacaaaaata 12416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 5083 - 5144
Alignment:
Q  46 aattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacccct 107  Q
    ||||||||  |||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  5083 aattaatcgctgccacgtcatcaaattagcaaaatgacatggaaaaggacaaaaatacccct 5144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 6288 - 6227
Alignment:
Q  43 cccaattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 104  Q
    |||| ||||| | ||||||||||||||||||||||| || ||| |||| |||||||||||||    
T  6288 cccacttaatgactgccacgtcatcaaattagcaaagtggcataggaaaggacaaaaatacc 6227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 221912 - 221969
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  221912 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatgaacaaaaataccc 221969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 222092 - 222035
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  222092 ttaatcactgccaagtcatcaaattaacaaaatggcatgggaatggacaaaaataccc 222035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 12083 - 12029
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||||||||||||    
T  12083 ttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaata 12029  T

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Target: scaffold0771 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 1043 - 1100
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 105  Q
    ||||||| || || |||||||||||||||||||| |||||||||||||||||||||||    
T  1043 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccc 1100  T

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Target: scaffold0128 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 19978 - 20035
Alignment:
Q  46 aattaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatac 103  Q
    ||||||| | || ||||||||||||||||||||||| |||||||||||||||||||||    
T  19978 aattaatgactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaatac 20035  T

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Target: scaffold0599 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 2516 - 2570
Alignment:
Q  48 ttaatcattgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaata 102  Q
    ||||||| | |||||| ||||||||||||||||| ||||||||||||||||||||    
T  2516 ttaatcactaccacgttatcaaattagcaaaatggcatgggaatggacaaaaata 2570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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