View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0267_low_5 (Length: 430)
Name: NF0267_low_5
Description: NF0267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0267_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 25 - 402
Target Start/End: Complemental strand, 3670046 - 3669671
Alignment:
| Q |
25 |
taaatataatgattcgttttatataattgatattgagtttagtagattagtcctccacaatattgaatcgatgtgtggactatgattgaaagatgtattt |
124 |
Q |
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| T |
3670046 |
taaatataatgattcgttttatataattgatattgaatttagtagattagtcctccacaatattaaatcgatgtgtgaactctgattgaaagatgtattt |
3669947 |
T |
|
| Q |
125 |
acattagagaaatgaagatcgtattcgtacaaacattttaaaacaattttttagacgactattttttatatttgcatcgtgttcttactcttccctgttc |
224 |
Q |
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|||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| || |
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| T |
3669946 |
acattagagaaatgaaaatcgtattcgtacaactattttaaaacaattttttagacaactattctttatatttgcatcgtgttcttactctcccctgctc |
3669847 |
T |
|
| Q |
225 |
tatattgnnnnnnngtcaaaagaagaagagcgttgtccaaaaaattgtcccaaattgataatactaatatcattatttcacttcaggtggaagaaatata |
324 |
Q |
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| T |
3669846 |
tatattgtttttttgtcaaaagaagaagaacgttgacaaaaaaattatcccaaattgataatacaaatatcattacttcacttcaggtggaagaaatat- |
3669748 |
T |
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| Q |
325 |
cgagagacaaaaaatacttcttatacaattctaagatgtgatcataccagaactaatacaccgtatccaatcaaaact |
402 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
3669747 |
-gagagacaaaaaatacttcttatacaattctaagatgtgatcatactagaactaatacaccgtatccaatcaaaact |
3669671 |
T |
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