View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0268_high_3 (Length: 291)
Name: NF0268_high_3
Description: NF0268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0268_high_3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 59 - 291
Target Start/End: Original strand, 40757907 - 40758135
Alignment:
| Q |
59 |
atttagtgattagacttgtttataataagccagtagtgtacttcatatacgtggaaaattcacaaaatttcatatcccaaaacatttcactgcttcacaa |
158 |
Q |
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| T |
40757907 |
atttagtgattagacttgtttataa---gccagtagtgtacttcatatacgtggaaaattcacgaaatttc-tatcccaaaacatttcactgcttcacaa |
40758002 |
T |
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| Q |
159 |
atcacaaaacatacaccaaactgctacctattttgagcttttaacatataacttttgtagggtcatatgctaacgtgtgctcttagaagttaaggattcc |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40758003 |
atcacaaaacatacaccaaactgctacctattttgagcttttaacatataacttttgtagggtcatatgctaacgtgtgctcttagaagttaaggattcc |
40758102 |
T |
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| Q |
259 |
aatatatacaaatcaaattacaatcaaatttta |
291 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
40758103 |
aatatatacaaatcaaattacaatcaaatttta |
40758135 |
T |
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