View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0268_high_9 (Length: 206)
Name: NF0268_high_9
Description: NF0268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0268_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 40929505 - 40929302
Alignment:
| Q |
1 |
gatgtcttgtttttggaaaggtttgtagagatttagaaccaaaaccaatcgtttttcgtgaaattctccaaaatatcagtactcgaaacattcttacttt |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40929505 |
gatgtcttgtttttggaaaggtttgtagagatttagaaccaaaaccaatcgtttttcgtgaaattctccaaaatatcagtactcgaaacattcttacttt |
40929406 |
T |
|
| Q |
101 |
cacaatatgaataagtccactagtatctttaggcactaaatatgcttcagactatgaggaccttgccagtagttgctatcattgataatgcctatgtttg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
40929405 |
cacaatatgaataagtccactagtatctttaggcactaaatatgcttcagactatgaggaccttgccagtagttgctatcattgataatgcctatgtttg |
40929306 |
T |
|
| Q |
201 |
atga |
204 |
Q |
| |
|
|||| |
|
|
| T |
40929305 |
atga |
40929302 |
T |
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