View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0268_low_14 (Length: 243)
Name: NF0268_low_14
Description: NF0268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0268_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 7529922 - 7530021
Alignment:
| Q |
16 |
catcatcatcagttccactttcaacgacatccctacgcttactggtaacgacacgctgattgtaatcgtctttggcatcactatcagtatcctcccccct |
115 |
Q |
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| T |
7529922 |
catcatcatcagatccactttcaacgacatccctacgcttactggtaacgacacgctgattgtaatcgtctttggcatcactatcagtatcctcccccct |
7530021 |
T |
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Target: chr3; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 7538968 - 7538869
Alignment:
| Q |
16 |
catcatcatcagttccactttcaacgacatccctacgcttactggtaacgacacgctgattgtaatcgtctttggcatcactatcagtatcctcccccct |
115 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7538968 |
catcatcatcagatccactttcaacgacatccctacgcttactggtaacgacacgctgattgtaatcgtctttggcatcactatcagtatcctcccccct |
7538869 |
T |
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