View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0269_low_17 (Length: 297)
Name: NF0269_low_17
Description: NF0269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0269_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 32936585 - 32936291
Alignment:
| Q |
1 |
atgatggtgtccgaagcatatatata----catccaaccttacaatgtaacctcgatacaacttcaatcgatataagataaagaattaacctaatattga |
96 |
Q |
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|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32936585 |
atgatggtgtccgaagcatatatatatatacatccaaccttacaatgtaacctcgatacaacttcaatcgatataagataaagaattaacctaatattga |
32936486 |
T |
|
| Q |
97 |
tagcgttctccatttgaaaaacatgcctaacaaataagccagcatgatcccaattgtaactgatagctacaagaaaacaacataaaaaatattcgtatca |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
32936485 |
tagcgttctccatttgaaaaacatgcctaacaaataagccagcatgatcccaattgtaactgatagctacaagaaaacaacataaaaaatattcgtatca |
32936386 |
T |
|
| Q |
197 |
aattaatgagaataataataaaaatgaacgcatgtgatgtaattctctgtttcaaagcaacataaagccaacctggttcacagatcctatgctac |
291 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |
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|
| T |
32936385 |
aattaatgagaataataataaaaatgaacgcatgtgatgtaattctctgtttcaaagcaacataaaaccaacctggttcacagatcctaggctac |
32936291 |
T |
|
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