View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0269_low_34 (Length: 201)
Name: NF0269_low_34
Description: NF0269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0269_low_34 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 91 - 201
Target Start/End: Complemental strand, 41276832 - 41276721
Alignment:
| Q |
91 |
aatatcactaaaatgagaggggcaaaatttaaagattacaaagtcatcagaaatttctacaaaataggatctatt-ccataaccatgtaaactcaacttc |
189 |
Q |
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| T |
41276832 |
aatatcactaaaatgagaggggcaaaatttaaagattacaaagtcatcagaaatttctacaaaataggatctattcccataaccatgtaaactcaacttc |
41276733 |
T |
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| Q |
190 |
atgatttaacta |
201 |
Q |
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|||||||||||| |
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| T |
41276732 |
atgatttaacta |
41276721 |
T |
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