View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0271_low_18 (Length: 230)
Name: NF0271_low_18
Description: NF0271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0271_low_18 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 31 - 230
Target Start/End: Complemental strand, 35749940 - 35749747
Alignment:
| Q |
31 |
caattacactgaactatgttattttcaaatgattagctatgtttcagtgtcggtgtccgtgtcgtatccgttgatatccgtgcctcacattcacttctca |
130 |
Q |
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| T |
35749940 |
caattacactgaataatgttattttcaaatgattagctatgtttcagtgtcggtgtc------gtatccgttggtatccgtgcctcacattcacttctca |
35749847 |
T |
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| Q |
131 |
tagcatgcaacccacatgggttggcccaactatatatgtttgaaacattggaatgtgctcctcttctagtctcaattttgaatttcggtaccaattttaa |
230 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||| |||| |||||||||| |
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| T |
35749846 |
tagcatgcaacccacatgggttggcgcaactatatatgtttgagacattggaatgtgctcttcttatagtctcaattttgaattccggtgccaattttaa |
35749747 |
T |
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