View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0272-INSERTION-14 (Length: 366)

Name: NF0272-INSERTION-14
Description: NF0272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0272-INSERTION-14
NF0272-INSERTION-14
[»] chr4 (23 HSPs)
chr4 (100-248)||(52293859-52294007)
chr4 (7-96)||(52294035-52294125)
chr4 (26-89)||(30024631-30024694)
chr4 (27-95)||(51044528-51044597)
chr4 (329-366)||(52293813-52293850)
chr4 (33-88)||(5131309-5131364)
chr4 (26-91)||(4191670-4191736)
chr4 (39-89)||(54327525-54327575)
chr4 (21-70)||(40709475-40709524)
chr4 (26-89)||(4071814-4071876)
chr4 (33-80)||(6364087-6364134)
chr4 (26-89)||(8130105-8130168)
chr4 (26-89)||(44007948-44008011)
chr4 (32-96)||(47946135-47946201)
chr4 (27-85)||(17884000-17884058)
chr4 (39-89)||(49219083-49219133)
chr4 (27-84)||(25717434-25717491)
chr4 (33-86)||(26520308-26520361)
chr4 (26-71)||(28623220-28623265)
chr4 (26-67)||(46176104-46176145)
chr4 (26-87)||(47970249-47970310)
chr4 (26-86)||(20907104-20907164)
chr4 (39-87)||(49803155-49803203)
[»] chr8 (31 HSPs)
chr8 (26-95)||(40280275-40280344)
chr8 (26-72)||(11188248-11188294)
chr8 (26-88)||(42597332-42597394)
chr8 (28-89)||(12361125-12361186)
chr8 (26-85)||(14482133-14482192)
chr8 (28-89)||(41620367-41620428)
chr8 (26-74)||(34563181-34563229)
chr8 (59-95)||(43907869-43907905)
chr8 (28-87)||(1112786-1112845)
chr8 (26-77)||(3945205-3945256)
chr8 (60-95)||(33553227-33553262)
chr8 (26-85)||(35534941-35535000)
chr8 (26-89)||(38874577-38874640)
chr8 (27-89)||(4558730-4558792)
chr8 (27-89)||(13652147-13652209)
chr8 (27-89)||(13710790-13710852)
chr8 (26-88)||(29699185-29699247)
chr8 (26-67)||(1561210-1561251)
chr8 (39-84)||(6526264-6526309)
chr8 (52-89)||(7026688-7026725)
chr8 (48-89)||(35374449-35374490)
chr8 (40-85)||(40728498-40728543)
chr8 (52-89)||(42237498-42237535)
chr8 (25-85)||(7646136-7646196)
chr8 (27-83)||(8823475-8823531)
chr8 (39-96)||(11000628-11000687)
chr8 (26-74)||(18356250-18356298)
chr8 (26-74)||(26215427-26215475)
chr8 (26-74)||(35453714-35453762)
chr8 (26-86)||(37444494-37444554)
chr8 (26-74)||(38561657-38561705)
[»] chr1 (29 HSPs)
chr1 (41-100)||(14737770-14737829)
chr1 (27-100)||(4200161-4200236)
chr1 (33-95)||(50319230-50319292)
chr1 (39-88)||(49517014-49517063)
chr1 (27-95)||(38651479-38651547)
chr1 (26-89)||(17269181-17269244)
chr1 (33-80)||(36641813-36641860)
chr1 (26-89)||(44032075-44032138)
chr1 (26-85)||(46499934-46499993)
chr1 (28-89)||(15360827-15360888)
chr1 (30-95)||(48748653-48748717)
chr1 (39-95)||(28077117-28077173)
chr1 (26-89)||(7274015-7274078)
chr1 (38-89)||(11211061-11211112)
chr1 (26-85)||(16982016-16982075)
chr1 (48-95)||(26293176-26293223)
chr1 (34-89)||(48830152-48830207)
chr1 (39-89)||(25479525-25479575)
chr1 (26-88)||(49557072-49557134)
chr1 (26-95)||(4202199-4202268)
chr1 (26-87)||(4549797-4549858)
chr1 (24-89)||(6933037-6933102)
chr1 (32-93)||(6976885-6976946)
chr1 (33-74)||(10199499-10199540)
chr1 (48-89)||(27738256-27738297)
chr1 (58-95)||(29834953-29834990)
chr1 (26-95)||(40357956-40358025)
chr1 (34-86)||(36151584-36151636)
chr1 (24-68)||(37818393-37818437)
[»] scaffold0024 (1 HSPs)
scaffold0024 (27-89)||(27508-27570)
[»] chr5 (26 HSPs)
chr5 (26-74)||(40048371-40048419)
chr5 (26-89)||(9202824-9202887)
chr5 (45-89)||(12595816-12595860)
chr5 (26-86)||(17756808-17756868)
chr5 (28-95)||(7096197-7096264)
chr5 (26-84)||(35095864-35095922)
chr5 (33-85)||(465892-465944)
chr5 (48-88)||(10303754-10303794)
chr5 (48-88)||(10363703-10363743)
chr5 (28-96)||(18897743-18897811)
chr5 (41-85)||(32969197-32969241)
chr5 (52-95)||(12242758-12242801)
chr5 (26-89)||(35135738-35135801)
chr5 (26-85)||(40097483-40097542)
chr5 (33-86)||(7674586-7674639)
chr5 (48-89)||(14295459-14295500)
chr5 (31-87)||(26209492-26209546)
chr5 (48-89)||(28586842-28586883)
chr5 (33-86)||(38034113-38034166)
chr5 (30-83)||(39128574-39128627)
chr5 (48-84)||(7853611-7853647)
chr5 (36-84)||(11615449-11615497)
chr5 (28-72)||(13224362-13224406)
chr5 (26-74)||(20982226-20982274)
chr5 (26-74)||(27106014-27106062)
chr5 (34-86)||(29117009-29117061)
[»] chr2 (34 HSPs)
chr2 (31-91)||(32098382-32098442)
chr2 (26-89)||(3673738-3673801)
chr2 (26-89)||(28803582-28803645)
chr2 (36-89)||(1939408-1939461)
chr2 (25-85)||(10143102-10143162)
chr2 (26-85)||(3611157-3611216)
chr2 (26-89)||(11344360-11344423)
chr2 (26-93)||(15171181-15171248)
chr2 (26-89)||(17952777-17952840)
chr2 (26-80)||(31461369-31461423)
chr2 (26-95)||(27288564-27288633)
chr2 (39-95)||(3227731-3227787)
chr2 (37-85)||(38916386-38916434)
chr2 (26-89)||(4550708-4550771)
chr2 (26-89)||(10150686-10150749)
chr2 (39-90)||(29633016-29633067)
chr2 (26-89)||(35809864-35809926)
chr2 (26-85)||(36114350-36114409)
chr2 (27-85)||(2416245-2416303)
chr2 (27-89)||(18962114-18962176)
chr2 (26-84)||(33197320-33197378)
chr2 (26-88)||(35755579-35755641)
chr2 (26-96)||(38355150-38355219)
chr2 (34-96)||(40672865-40672927)
chr2 (39-89)||(40837504-40837554)
chr2 (26-89)||(44600470-44600535)
chr2 (41-86)||(6988061-6988106)
chr2 (26-96)||(25609727-25609799)
chr2 (28-89)||(33192126-33192187)
chr2 (39-84)||(39567847-39567892)
chr2 (26-66)||(2400087-2400126)
chr2 (33-89)||(14666486-14666542)
chr2 (26-70)||(29628837-29628881)
chr2 (49-85)||(36114603-36114639)
[»] chr7 (24 HSPs)
chr7 (26-97)||(7244633-7244704)
chr7 (38-89)||(39591543-39591594)
chr7 (26-84)||(21853197-21853255)
chr7 (27-85)||(28165023-28165081)
chr7 (26-91)||(3241372-3241437)
chr7 (32-89)||(35536044-35536101)
chr7 (26-73)||(992001-992048)
chr7 (26-89)||(24973875-24973938)
chr7 (24-79)||(42656444-42656499)
chr7 (30-89)||(45813256-45813315)
chr7 (34-85)||(48157200-48157251)
chr7 (26-80)||(5269461-5269515)
chr7 (39-89)||(28178913-28178963)
chr7 (27-89)||(33894555-33894616)
chr7 (39-85)||(43152982-43153028)
chr7 (52-89)||(1417221-1417258)
chr7 (28-89)||(9527166-9527227)
chr7 (48-89)||(12835013-12835054)
chr7 (48-89)||(30456526-30456567)
chr7 (41-89)||(23918903-23918951)
chr7 (33-89)||(27121662-27121718)
chr7 (26-86)||(30496635-30496695)
chr7 (29-89)||(46091530-46091590)
chr7 (49-89)||(46825052-46825092)
[»] chr3 (35 HSPs)
chr3 (26-72)||(16790181-16790227)
chr3 (26-96)||(39971250-39971320)
chr3 (40-89)||(10101552-10101601)
chr3 (40-89)||(10212477-10212526)
chr3 (26-89)||(22214757-22214820)
chr3 (26-89)||(44374720-44374783)
chr3 (39-85)||(42808923-42808969)
chr3 (34-88)||(48364956-48365010)
chr3 (28-89)||(1395604-1395665)
chr3 (27-95)||(12985393-12985459)
chr3 (48-89)||(15304423-15304464)
chr3 (26-95)||(16790426-16790495)
chr3 (36-85)||(32095271-32095320)
chr3 (26-74)||(41159040-41159088)
chr3 (34-85)||(2128331-2128382)
chr3 (27-89)||(10357364-10357427)
chr3 (48-95)||(25195377-25195424)
chr3 (26-89)||(38462212-38462275)
chr3 (26-89)||(49586992-49587054)
chr3 (27-89)||(3182438-3182500)
chr3 (27-89)||(20192682-20192744)
chr3 (39-85)||(33882972-33883018)
chr3 (39-89)||(42809245-42809295)
chr3 (32-89)||(8007771-8007828)
chr3 (26-71)||(20173982-20174027)
chr3 (48-89)||(26990687-26990728)
chr3 (36-89)||(36646458-36646511)
chr3 (48-89)||(36783410-36783451)
chr3 (27-84)||(38902018-38902075)
chr3 (33-90)||(40122827-40122884)
chr3 (26-87)||(41028929-41028990)
chr3 (26-95)||(44284128-44284197)
chr3 (52-89)||(51455854-51455891)
chr3 (26-89)||(21862251-21862315)
chr3 (26-82)||(26878048-26878104)
[»] chr6 (23 HSPs)
chr6 (35-95)||(2205638-2205698)
chr6 (34-86)||(24836278-24836330)
chr6 (26-81)||(4248889-4248944)
chr6 (26-89)||(11340701-11340764)
chr6 (31-89)||(29274305-29274363)
chr6 (26-86)||(264302-264362)
chr6 (29-85)||(507154-507210)
chr6 (26-86)||(9559620-9559680)
chr6 (28-88)||(29940729-29940789)
chr6 (39-95)||(31583645-31583701)
chr6 (26-85)||(4006645-4006704)
chr6 (26-89)||(22742297-22742360)
chr6 (24-71)||(33068655-33068702)
chr6 (59-97)||(5731556-5731594)
chr6 (39-89)||(10728576-10728626)
chr6 (27-85)||(24774690-24774748)
chr6 (39-85)||(28621190-28621236)
chr6 (26-72)||(31670968-31671014)
chr6 (26-96)||(9093623-9093695)
chr6 (52-85)||(9582678-9582711)
chr6 (53-89)||(7713983-7714019)
chr6 (26-70)||(12631543-12631587)
chr6 (26-86)||(20671944-20672004)
[»] scaffold0549 (2 HSPs)
scaffold0549 (26-89)||(1800-1863)
scaffold0549 (26-89)||(3890-3953)
[»] scaffold0590 (1 HSPs)
scaffold0590 (26-74)||(1165-1213)
[»] scaffold0275 (1 HSPs)
scaffold0275 (26-74)||(2762-2810)
[»] scaffold0085 (1 HSPs)
scaffold0085 (26-89)||(34073-34136)
[»] scaffold0103 (1 HSPs)
scaffold0103 (39-89)||(51512-51562)
[»] scaffold0100 (1 HSPs)
scaffold0100 (26-70)||(42548-42592)


Alignment Details
Target: chr4 (Bit Score: 149; Significance: 1e-78; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 100 - 248
Target Start/End: Complemental strand, 52294007 - 52293859
Alignment:
Q  100 ttacaaaaaataaaatgaaatcggcttaggtacatgtcatagtttgtttcacaacttgatagtgataacacacatctatgtccttgaggtataactggat 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52294007 ttacaaaaaataaaatgaaatcggcttaggtacatgtcatagtttgtttcacaacttgatagtgataacacacatctatgtccttgaggtataactggat 52293908  T
Q  200 tctttgaaagcttgattagggagctaccatctcgttgaataatagttga 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52293907 tctttgaaagcttgattagggagctaccatctcgttgaataatagttga 52293859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 52294125 - 52294035
Alignment:
Q  7 atctcaatccctagaataaataagtgcttatatataagttgttt-ctataaccaaagataaaataaagtgaaattgttttcataagctata 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  52294125 atctcaatccctagaataaataagtgcttatatataagttgttttctataaccaaagataaaataaagtgaaattgttttcataaactata 52294035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 30024631 - 30024694
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| |||||  ||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  30024631 ataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcata 30024694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 51044597 - 51044528
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaa-ttgttttcataagctat 95  Q
    |||||| |||| |||||| | |||||||||| |||||||||||||||| ||| |||||||||||||||||    
T  51044597 taagtgtttatgtataagctatttctataacaaaagataaaataaagtcaaacttgttttcataagctat 51044528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 366
Target Start/End: Complemental strand, 52293850 - 52293813
Alignment:
Q  329 tttctagtagatatgttaaattctggctgttactttta 366  Q
    ||||||||||||||||||||||||||||||||||||||    
T  52293850 tttctagtagatatgttaaattctggctgttactttta 52293813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 5131364 - 5131309
Alignment:
Q  33 cttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcat 88  Q
    ||||| |||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  5131364 cttatgtataagttgtttatataacaaaagataaaataaagttaaaatgttttcat 5131309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 4191670 - 4191736
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagat-aaaataaagtgaaattgttttcataag 91  Q
    |||||||||||| |||||| | |||||||||| |||||| |||||||||| ||| ||||||||||||    
T  4191670 ataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcataag 4191736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 54327575 - 54327525
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||||||||||| |||||||||| ||||| ||| ||||||||||    
T  54327575 tataagttgtttctataacaaaagataaaacaaagtcaaactgttttcata 54327525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 40709524 - 40709475
Alignment:
Q  21 aataaataagtgcttatatataagttgtttctataaccaaagataaaata 70  Q
    |||| |||||||||||| |||||| |||||||||||| ||||||||||||    
T  40709524 aatatataagtgcttatttataagctgtttctataacaaaagataaaata 40709475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 4071814 - 4071876
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||| |||||||||| |  |||||||||| |||||||||||||||| ||||| ||||||||    
T  4071814 ataagtgtttatatataacta-tttctataacaaaagataaaataaagtcaaattattttcata 4071876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 6364087 - 6364134
Alignment:
Q  33 cttatatataagttgtttctataaccaaagataaaataaagtgaaatt 80  Q
    ||||| |||||| | |||||||||| ||||||||||||||||||||||    
T  6364087 cttatgtataagctatttctataacaaaagataaaataaagtgaaatt 6364134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 8130105 - 8130168
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||||||  ||| |||| |||||||||| |||||||| ||||||| ||||| ||||||||    
T  8130105 ataagtgcttacgtatgagttctttctataacaaaagataacataaagtcaaattattttcata 8130168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 44008011 - 44007948
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| |||||||||||| | || ||||| | |||||||||||||||  ||||||||||||||    
T  44008011 ataagtacttatatataagctattactataccaaaagataaaataaagacaaattgttttcata 44007948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 47946135 - 47946201
Alignment:
Q  32 gcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc--ataagctata 96  Q
    |||||| |||||||| ||||||||||  |||||||||| |||| |||||||||||  ||||||||||    
T  47946135 gcttatttataagttatttctataacgtaagataaaatgaagttaaattgttttcgtataagctata 47946201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 17884000 - 17884058
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||||||| || | |||| | |||||||||| |||||||||||||||| ||||||||||    
T  17884000 taagtgctcatgtgtaagctatttctataacaaaagataaaataaagttaaattgtttt 17884058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 49219083 - 49219133
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||| |||||||||| ||| |||||||||||| ||||| ||||||||    
T  49219083 tataagttatttctataacaaaatataaaataaagtcaaattattttcata 49219133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 25717434 - 25717491
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttt 84  Q
    ||||||||||| |||||||| |||||| ||  |||||||||||||||  |||||||||    
T  25717434 taagtgcttatgtataagttatttctagaatgaaagataaaataaagacaaattgttt 25717491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 26520361 - 26520308
Alignment:
Q  33 cttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc 86  Q
    ||||| |||||  |||||||||||| |||||| ||||||||| |||||||||||    
T  26520361 cttatgtataaactgtttctataacaaaagatgaaataaagttaaattgttttc 26520308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 28623220 - 28623265
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataa 71  Q
    |||||||||||| |||||||| ||| |||||| |||||||||||||    
T  28623220 ataagtgcttatgtataagttatttatataacaaaagataaaataa 28623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 46176145 - 46176104
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaa 67  Q
    ||||||||||||| ||||||| |||||||||| |||||||||    
T  46176145 ataagtgcttatacataagttatttctataacaaaagataaa 46176104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 47970249 - 47970310
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttca 87  Q
    |||||||||||| |||||| | |||||||||| ||||||||||| |||| ||| | ||||||    
T  47970249 ataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttca 47970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 20907104 - 20907164
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc 86  Q
    ||||||| |||| |||||| | ||| |||||  |||||||||||||||||||| |||||||    
T  20907104 ataagtgtttatgtataagctatttgtataagaaaagataaaataaagtgaaactgttttc 20907164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 49803155 - 49803203
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttca 87  Q
    |||||||| |||||||| | ||||||||||| |||| ||||||||||||    
T  49803155 tataagttatttctatagcaaaagataaaatgaagttaaattgttttca 49803203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 40280344 - 40280275
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||||| |||||||||||| |||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  40280344 ataagtgcctatatataagttatttctacaacaaaagataaaataaagtaaaattgttttcataagctat 40280275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 11188294 - 11188248
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaa 72  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  11188294 ataagtgcttatgtataagttgtttctataacaaaagataaaataaa 11188248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 42597332 - 42597394
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcat 88  Q
    |||||| ||||| |||||| | |||||||||| |||||||||||||||| |||||||||||||    
T  42597332 ataagtacttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcat 42597394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 12361125 - 12361186
Alignment:
Q  28 aagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||| |||||||||||||| |||||||||  ||||||||||| |||| ||||||||||||||    
T  12361125 aagtacttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcata 12361186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 14482133 - 14482192
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||||||||||| |||||  | |||||||||| |||||||||||||||| ||||||||||    
T  14482133 ataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaattgtttt 14482192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 41620428 - 41620367
Alignment:
Q  28 aagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||||||||||| ||| | |||| |||||||||||||||| ||||| | ||||||    
T  41620428 aagtgcttatatataagttatttttgtaacaaaagataaaataaagtcaaattatgttcata 41620367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 34563181 - 34563229
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagt 74  Q
    ||||||||||||||||||||| ||||||| || || |||||||||||||    
T  34563181 ataagtgcttatatataagttatttctatgacaaaggataaaataaagt 34563229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 43907905 - 43907869
Alignment:
Q  59 aaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||||||||||||| ||||||||||||||||||||    
T  43907905 aaagataaaataaagtcaaattgttttcataagctat 43907869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 1112786 - 1112845
Alignment:
Q  28 aagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttca 87  Q
    |||||||||| |||| | | |||||||||| ||||||||||||| || ||||||||||||    
T  1112786 aagtgcttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttca 1112845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 3945205 - 3945256
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaa 77  Q
    ||||||| ||||||||||||| |||| ||||| |||||||||||||| ||||    
T  3945205 ataagtgtttatatataagttatttcaataacaaaagataaaataaaatgaa 3945256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 95
Target Start/End: Original strand, 33553227 - 33553262
Alignment:
Q  60 aagataaaataaagtgaaattgttttcataagctat 95  Q
    ||||||||||||||| ||||||||||||||||||||    
T  33553227 aagataaaataaagtcaaattgttttcataagctat 33553262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 35535000 - 35534941
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    ||||||||||||||||||| | |||||||||  |||| ||||||||||| ||| ||||||    
T  35535000 ataagtgcttatatataagctatttctataataaaagttaaaataaagtcaaactgtttt 35534941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 38874577 - 38874640
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||| |||| |||||||||||||| |||| |||||||||||  ||| ||||| ||||||||    
T  38874577 ataagtgtttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcata 38874640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 4558730 - 4558792
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| |||| |||||| | |||||||||  |||||||||||||||| ||||| ||||||||    
T  4558730 taagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcata 4558792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 13652147 - 13652209
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||| |||||| | |||||||| | ||||||  ||| |||||||||||||||||||    
T  13652147 taagtgcttatgtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcata 13652209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 13710790 - 13710852
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||| |||||| | |||||||| | ||||||  ||| |||||||||||||||||||    
T  13710790 taagtgcttatgtataagctatttctatagcaaaagatggaatgaagtgaaattgttttcata 13710852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 29699185 - 29699247
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcat 88  Q
    |||| ||||||| || ||||| |||||||||| |||||||||||||||| ||| |||| ||||    
T  29699185 ataaatgcttatgtacaagttatttctataacaaaagataaaataaagtcaaaatgttgtcat 29699247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 1561210 - 1561251
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaa 67  Q
    |||||||||||| |||||||| |||||||||| |||||||||    
T  1561210 ataagtgcttatgtataagttatttctataacgaaagataaa 1561251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 6526309 - 6526264
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttt 84  Q
    |||||||| | ||||||||  |||||||||||||||||||||||||    
T  6526309 tataagttatctctataacagaagataaaataaagtgaaattgttt 6526264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 7026688 - 7026725
Alignment:
Q  52 tataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  7026688 tataacaaaagataaaataaagtaaaattgttttcata 7026725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 35374490 - 35374449
Alignment:
Q  48 tttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||| | |||||||||||||||| ||||||||||||||    
T  35374490 tttctatagcgaaagataaaataaagttaaattgttttcata 35374449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 40728543 - 40728498
Alignment:
Q  40 ataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    ||||||| |||||||||| |||||||||||||||| ||| ||||||    
T  40728543 ataagttatttctataacaaaagataaaataaagtcaaactgtttt 40728498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 42237535 - 42237498
Alignment:
Q  52 tataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  42237535 tataacaaaagataaaataaagttaaattgttttcata 42237498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 7646136 - 7646196
Alignment:
Q  25 aataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||||||| |||| |||||| | |||||||||  |||| ||||||||||| ||||||||||    
T  7646136 aataagtggttatgtataagctatttctataagaaaaggtaaaataaagttaaattgtttt 7646196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 8823531 - 8823475
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtt 83  Q
    ||||||||||||||||||   |||||||||| |||||||||| ||||| | ||||||    
T  8823531 taagtgcttatatataagccatttctataacaaaagataaaacaaagtcagattgtt 8823475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 11000687 - 11000628
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttc--ataagctata 96  Q
    |||||| | |||| ||||| |||||||||||||||| |||||||||||  ||||||||||    
T  11000687 tataagctatttccataacaaaagataaaataaagtcaaattgttttcgaataagctata 11000628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 18356250 - 18356298
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagt 74  Q
    |||| ||||||| | ||||||||||||||| | ||||||||||||||||    
T  18356250 ataattgcttatgtgtaagttgtttctatagcaaaagataaaataaagt 18356298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 26215427 - 26215475
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagt 74  Q
    ||||| |||||| |||||| | |||||||||| ||||||||||||||||    
T  26215427 ataagcgcttatgtataagctatttctataacaaaagataaaataaagt 26215475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 35453762 - 35453714
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagt 74  Q
    |||||| |||||||||||  |||||||| ||| ||||||||||||||||    
T  35453762 ataagtacttatatataatctgtttctacaacaaaagataaaataaagt 35453714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 37444554 - 37444494
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc 86  Q
    ||||| |||||| |||||| | || ||||||| ||||||||| |||||| |||||||||||    
T  37444554 ataagcgcttatgtataagctattactataacaaaagataaagtaaagttaaattgttttc 37444494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 38561657 - 38561705
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagt 74  Q
    |||||||  |||||||||||| ||| |||||| ||||||||||||||||    
T  38561657 ataagtgtctatatataagttatttatataacaaaagataaaataaagt 38561705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 14737829 - 14737770
Alignment:
Q  41 taagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctatatatt 100  Q
    |||||| |||||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  14737829 taagttatttctataacaaaagataaaataaagtcaaattgttttcataagctatctatt 14737770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 4200161 - 4200236
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc--ataagctatatatt 100  Q
    |||||| ||||||||||||| ||| |||||| |||||||||||||||| || ||||||||  ||||||||||||||    
T  4200161 taagtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctatatatt 4200236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 50319230 - 50319292
Alignment:
Q  33 cttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    ||||| |||||| | |||||||||| |||||||||||||||| || |||||||||||||||||    
T  50319230 cttatgtataagctatttctataacaaaagataaaataaagtcaagttgttttcataagctat 50319292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 49517014 - 49517063
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttcat 88  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  49517014 tataagttatttctataacaaaagataaaataaagtcaaattgttttcat 49517063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 38651547 - 38651479
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    ||||||||||| |||||| |  ||||||||| ||||||||| ||||||  |||||||||||||||||||    
T  38651547 taagtgcttatgtataagctaattctataacaaaagataaactaaagtcgaattgttttcataagctat 38651479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 17269181 - 17269244
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||||||| |||||||| |||||| ||| ||||  |||||||||| ||||||||||||||    
T  17269181 ataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcata 17269244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 36641813 - 36641860
Alignment:
Q  33 cttatatataagttgtttctataaccaaagataaaataaagtgaaatt 80  Q
    |||||||||||||| |||||||||| |||||||||||||||| |||||    
T  36641813 cttatatataagttatttctataacaaaagataaaataaagtcaaatt 36641860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 44032138 - 44032075
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||| |||| ||||||  ||||||||||| |||| ||||||||||| ||||||||||||||    
T  44032138 ataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcata 44032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 46499993 - 46499934
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||||||||||| |||||| | |||||||||  |||||||||||||||| ||||||||||    
T  46499993 ataagtgcttatctataagctatttctataagaaaagataaaataaagtcaaattgtttt 46499934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 15360827 - 15360888
Alignment:
Q  28 aagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||| |||| ||| |||| |||||||||| |||||||||||||||| ||| ||||||||||    
T  15360827 aagtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcata 15360888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 48748717 - 48748653
Alignment:
Q  30 gtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||||| |||||| | |||||||| | |||||| ||||||||| ||||||||||||||||||||    
T  48748717 gtgcttatgtataagctatttctata-caaaagatgaaataaagttaaattgttttcataagctat 48748653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 28077173 - 28077117
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||| | ||||||||||||||||||||| ||| | ||| ||||||||||||||||    
T  28077173 tataagctatttctataaccaaagataaaagaaaatcaaactgttttcataagctat 28077117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 7274078 - 7274015
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||| ||||||| |||| ||| ||| |||||| |||||| ||||||||| ||||||||||||||    
T  7274078 ataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgttttcata 7274015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 11211061 - 11211112
Alignment:
Q  38 atataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||| |||||| ||| |||||||||||||||| ||||| ||||||||    
T  11211061 atataagttatttctagaacaaaagataaaataaagttaaatttttttcata 11211112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 16982075 - 16982016
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    ||||||| |||| ||||| || |||| ||||| ||||||||||||||||| |||||||||    
T  16982075 ataagtgtttatgtataacttatttcgataacaaaagataaaataaagtggaattgtttt 16982016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 26293223 - 26293176
Alignment:
Q  48 tttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||||||| |||  ||||||||||| ||||||||||||||||||||    
T  26293223 tttctataacaaaaagtaaaataaagtcaaattgttttcataagctat 26293176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 48830207 - 48830152
Alignment:
Q  34 ttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||| |||||||| ||||||| ||||||||||||||||||| ||| | ||||||||    
T  48830207 ttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcata 48830152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 25479525 - 25479575
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| | |||||||||||||||||||||||| || ||||||| ||||||    
T  25479525 tataagatctttctataaccaaagataaaataacgtcaaattgtcttcata 25479575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 49557072 - 49557134
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcat 88  Q
    |||||||||  | |||||||| |||||||||| |||||||||||||||| |||| || |||||    
T  49557072 ataagtgctgctgtataagttatttctataacaaaagataaaataaagttaaatagtattcat 49557134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 4202268 - 4202199
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||||||||  |||||||| |||||||||| |||||||||  ||||| ||  |||||||| |||||||    
T  4202268 ataagtgcttaagtataagttatttctataacaaaagataaaccaaagtcaagctgttttcaaaagctat 4202199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 4549797 - 4549858
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttca 87  Q
    |||| ||||||| || ||| | |||||||||| |||||||||||||||| ||||||| ||||    
T  4549797 ataaatgcttatgtacaagctatttctataacaaaagataaaataaagttaaattgtcttca 4549858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 6933102 - 6933037
Alignment:
Q  24 aaataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||| || ||||||   ||| |||||| ||| |||||||||||| ||||||||||||||    
T  6933102 aaataagtgctcatgtataagccatttttataacaaaacataaaataaagtcaaattgttttcata 6933037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 6976885 - 6976946
Alignment:
Q  32 gcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagct 93  Q
    |||||| |||||| | |||||||||| |||||||| ||||||| ||| | ||||||||||||    
T  6976885 gcttatgtataagatatttctataacaaaagataagataaagttaaactattttcataagct 6976946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 10199540 - 10199499
Alignment:
Q  33 cttatatataagttgtttctataaccaaagataaaataaagt 74  Q
    |||||| ||||||| ||||||||||| |||||||||||||||    
T  10199540 cttatagataagttatttctataacccaagataaaataaagt 10199499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 27738297 - 27738256
Alignment:
Q  48 tttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| ||| |||||||||||||||| ||||||||||||||    
T  27738297 tttctacaacaaaagataaaataaagtcaaattgttttcata 27738256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 29834990 - 29834953
Alignment:
Q  58 caaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  29834990 caaaaataaaataaagtcaaattgttttcataagctat 29834953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 40358025 - 40357956
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||||  ||| |||||| | |||||||||| |  ||||||||||||| ||||||||||||| ||||||    
T  40358025 ataagtgactatgtataagctatttctataacaatggataaaataaagtcaaattgttttcatgagctat 40357956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 36151636 - 36151584
Alignment:
Q  34 ttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc 86  Q
    |||| |||||| | |||| ||||| |||||||||||||||| |||||||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttc 36151584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 37818393 - 37818437
Alignment:
Q  24 aaataagtgcttatatataagttgtttctataaccaaagataaaa 68  Q
    |||||||||||||| |||||||| |||||||||| | ||||||||    
T  37818393 aaataagtgcttatgtataagttatttctataacaagagataaaa 37818437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 27508 - 27570
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||| |||||||| ||||||||||  ||||||||||||||| ||||||||||||||    
T  27508 taagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcata 27570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 40048419 - 40048371
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagt 74  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  40048419 ataagtgcttatgtataagttgtttctataacaaaagataaaataaagt 40048371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 9202887 - 9202824
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||||||||||| | ||||| || | |||||||||||||||| ||||||||||||||    
T  9202887 ataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcata 9202824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 12595860 - 12595816
Alignment:
Q  45 ttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||    
T  12595860 ttgtttctataacaaaagataaaataaagttaaattgttttcata 12595816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 17756868 - 17756808
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc 86  Q
    |||||||||||| ||| |||||||||| ||||  ||||||||||||||| |||||||||||    
T  17756868 ataagtgcttatgtatgagttgtttctttaacagaagataaaataaagtcaaattgttttc 17756808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 7096264 - 7096197
Alignment:
Q  28 aagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||||||| |||||| | |||||||||| |||||||||||||||| |||   ||||||||||||||    
T  7096264 aagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaaccattttcataagctat 7096197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 35095922 - 35095864
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttt 84  Q
    |||||||||||||| |||  | |||||||||| |||||||||||||||| |||||||||    
T  35095922 ataagtgcttatatttaaactatttctataacaaaagataaaataaagtcaaattgttt 35095864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 465892 - 465944
Alignment:
Q  33 cttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||||||||||| | ||||||| || |||||||||||||||| ||||||||||    
T  465892 cttatatataagctatttctatgacaaaagataaaataaagttaaattgtttt 465944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 10303754 - 10303794
Alignment:
Q  48 tttctataaccaaagataaaataaagtgaaattgttttcat 88  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  10303754 tttctataacaaaagataaaataaagtcaaattgttttcat 10303794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 10363703 - 10363743
Alignment:
Q  48 tttctataaccaaagataaaataaagtgaaattgttttcat 88  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  10363703 tttctataacaaaagataaaataaagttaaattgttttcat 10363743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 18897811 - 18897743
Alignment:
Q  28 aagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctata 96  Q
    |||||||||| |||||||| ||||||  ||  |||||||||| |||| ||||||||||| |||||||||    
T  18897811 aagtgcttatttataagttatttctaagacagaagataaaattaagtcaaattgttttcgtaagctata 18897743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 32969241 - 32969197
Alignment:
Q  41 taagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||||    
T  32969241 taagttgtttctataacaaaagataaaataaagtcaaattatttt 32969197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 95
Target Start/End: Complemental strand, 12242801 - 12242758
Alignment:
Q  52 tataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||| |||||||||||| ||| ||||||||||||||||||||    
T  12242801 tataacaaaagataaaatagagtcaaattgttttcataagctat 12242758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 35135801 - 35135738
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||| |||| |||||| | |||||||||| |||||||||||||||| ||| | ||||||||    
T  35135801 ataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcata 35135738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 40097542 - 40097483
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||||||| ||| |||||||| ||||||||||  ||||||||||| ||| ||||||||||    
T  40097542 ataagtgcgtatgtataagttatttctataacagaagataaaatagagttaaattgtttt 40097483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 7674586 - 7674639
Alignment:
Q  33 cttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc 86  Q
    |||||||||||| | |||||||| | |||||||||||||| | |||||||||||    
T  7674586 cttatatataagctatttctataccaaaagataaaataaatttaaattgttttc 7674639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 14295459 - 14295500
Alignment:
Q  48 tttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||||| |||||||||||||||| ||| ||||||||||    
T  14295459 tttctataacaaaagataaaataaagtcaaactgttttcata 14295500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 26209546 - 26209492
Alignment:
Q  31 tgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttca 87  Q
    ||||||| |||||||| ||||||||||  |||||||||||||||  |||||||||||    
T  26209546 tgcttatgtataagttatttctataac--aagataaaataaagtccaattgttttca 26209492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 28586883 - 28586842
Alignment:
Q  48 tttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||||| |||||||||||||||| ||| ||||||||||    
T  28586883 tttctataacaaaagataaaataaagtcaaactgttttcata 28586842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 38034166 - 38034113
Alignment:
Q  33 cttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc 86  Q
    ||||| ||||||||||||||| ||| ||| |||||||||||  |||||||||||    
T  38034166 cttatgtataagttgtttctacaacaaaacataaaataaagcaaaattgttttc 38034113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 39128574 - 39128627
Alignment:
Q  30 gtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtt 83  Q
    |||||||| |||||| |  ||||||||| |||||||||||||||| ||||||||    
T  39128574 gtgcttatgtataagctaattctataacaaaagataaaataaagtcaaattgtt 39128627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 7853611 - 7853647
Alignment:
Q  48 tttctataaccaaagataaaataaagtgaaattgttt 84  Q
    |||||||||| |||||||||||||||| |||||||||    
T  7853611 tttctataacaaaagataaaataaagttaaattgttt 7853647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 11615449 - 11615497
Alignment:
Q  36 atatataagttgtttctataaccaaagataaaataaagtgaaattgttt 84  Q
    ||||||||| | ||| |||||| |||||||||||||||| |||||||||    
T  11615449 atatataagctatttttataacaaaagataaaataaagtcaaattgttt 11615497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 13224362 - 13224406
Alignment:
Q  28 aagtgcttatatataagttgtttctataaccaaagataaaataaa 72  Q
    |||||||||| |||||| | |||||||||| ||||||||||||||    
T  13224362 aagtgcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 20982274 - 20982226
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagt 74  Q
    |||||||||||| |||||| | |||||||||| || |||||||||||||    
T  20982274 ataagtgcttatgtataagctatttctataacaaaggataaaataaagt 20982226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 27106062 - 27106014
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagt 74  Q
    |||||||||||  |||||||  |||||||||| ||||||||||||||||    
T  27106062 ataagtgcttacgtataagtcatttctataacaaaagataaaataaagt 27106014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 29117061 - 29117009
Alignment:
Q  34 ttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc 86  Q
    |||| |||| ||| |||||||||| |||||||||||||||| ||| |||||||    
T  29117061 ttatgtatatgttatttctataacaaaagataaaataaagtcaaactgttttc 29117009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 32098442 - 32098382
Alignment:
Q  31 tgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataag 91  Q
    |||||||||||||| | |||||||||| |||||||||||||||| ||| ||||||||||||    
T  32098442 tgcttatatataagctatttctataacaaaagataaaataaagtcaaagtgttttcataag 32098382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 3673738 - 3673801
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||||||| ||| |||| |||||||||| ||| |||||||||||| ||||||||||||||    
T  3673738 ataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcata 3673801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 28803645 - 28803582
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||||||||||||| |||| ||||| |||||||||||||||| ||| || |||||||    
T  28803645 ataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcata 28803582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 1939461 - 1939408
Alignment:
Q  36 atatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||| |||||||||| |||||||||||||||||||| | ||||||||    
T  1939461 atatataagttatttctataacaaaagataaaataaagtgaaactattttcata 1939408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 10143102 - 10143162
Alignment:
Q  25 aataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||| |||| ||| ||||||    
T  10143102 aataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttt 10143162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 3611157 - 3611216
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||||||||||| |||||||| |||||||| | |||| ||||||||||| ||||||||||    
T  3611157 ataagtgcttatgtataagttatttctatagcaaaaggtaaaataaagttaaattgtttt 3611216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 11344423 - 11344360
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||||  ||||| | |||||||||| |||||||||| ||||| ||||||||||||||    
T  11344423 ataagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcata 11344360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 15171181 - 15171248
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagct 93  Q
    ||||||| |||| |||||||| ||||||||||  |||||||| |||||| ||| ||||||||||||||    
T  15171181 ataagtgtttatgtataagttttttctataacagaagataaattaaagtcaaaatgttttcataagct 15171248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 17952840 - 17952777
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||| ||||||||||||| | |||||||||| |||||||||||||||| ||| | ||||||||    
T  17952840 ataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcata 17952777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 31461369 - 31461423
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaatt 80  Q
    ||||||| ||||||||||| | |||||||||| |||||||||||||||| |||||    
T  31461369 ataagtggttatatataagctatttctataacaaaagataaaataaagtcaaatt 31461423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 27288564 - 27288633
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||||||||| || |||||||||||||||  |||||||||||||| | ||| |||||  |||||||||    
T  27288564 ataagtgcttatgtaaaagttgtttctataataaaagataaaataaaatcaaactgtttatataagctat 27288633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 3227787 - 3227731
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||| |||||||||||  ||| |||||| ||||| ||||||||||||||||||||    
T  3227787 tataagctgtttctataataaaaaataaaacaaagttaaattgttttcataagctat 3227731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 38916434 - 38916386
Alignment:
Q  37 tatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||||||||| || ||||||| |||||||||||||||| ||||||||||    
T  38916434 tatataagtttttcctataactaaagataaaataaagttaaattgtttt 38916386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 4550708 - 4550771
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||||||| ||||||||||||| ||||  ||||||||||||| || ||  ||||||||||    
T  4550708 ataagtgcttatgtataagttgtttccataataaaagataaaataacgtcaagctgttttcata 4550771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 10150686 - 10150749
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||| |||| |||||||| |||||||||  ||||||||||||| || |||| |||||||||    
T  10150686 ataagtgtttatgtataagttatttctataataaaagataaaataacgttaaatggttttcata 10150749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 29633016 - 29633067
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttcataa 90  Q
    |||||||| |||||||||| ||| ||| |||||||| |||||||||||||||    
T  29633016 tataagttatttctataacaaaaaatagaataaagtcaaattgttttcataa 29633067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 35809864 - 35809926
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||||||| |||||||| |||| || || |||||||||||||| | ||||||||||||||    
T  35809864 ataagtgcttatgtataagttatttccatgac-aaagataaaataaaatcaaattgttttcata 35809926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 36114350 - 36114409
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||||||||||||||| || | ||| ||| || |||||||||||||||| ||||||||||    
T  36114350 ataagtgcttatatattagctatttttatgacaaaagataaaataaagttaaattgtttt 36114409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 2416245 - 2416303
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    ||||||||||| |||||||| ||||| || | ||||||||||| |||| ||||||||||    
T  2416245 taagtgcttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgtttt 2416303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 18962176 - 18962114
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||| ||| || | ||| |||||| |||||||||||||||| ||| ||||||||||    
T  18962176 taagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcata 18962114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 33197378 - 33197320
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttt 84  Q
    |||||||||||| |||||| | |||||||||| ||||||| |||||||| || ||||||    
T  33197378 ataagtgcttatctataagctatttctataacaaaagatagaataaagtcaagttgttt 33197320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 35755641 - 35755579
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcat 88  Q
    ||||||| |||| |||||| | ||||||||| |||| | |||||||||| |||||||||||||    
T  35755641 ataagtgtttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcat 35755579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 38355150 - 38355219
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctata 96  Q
    |||||| ||||| |||||| | ||||||||||  || |||||||| ||| |||||||||||||||||||||    
T  38355150 ataagtacttat-tataagctatttctataacgtaaaataaaatagagtcaaattgttttcataagctata 38355219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 40672927 - 40672865
Alignment:
Q  34 ttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctata 96  Q
    |||| |||||||| ||||||| |  |||||||||||||||| | ||||||||||||| |||||    
T  40672927 ttatgtataagttatttctatgaaaaaagataaaataaagtcacattgttttcataaactata 40672865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 40837554 - 40837504
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| | |||||||||| ||||||||| |||||| ||||||||||||||    
T  40837554 tataagctatttctataacaaaagataaattaaagtcaaattgttttcata 40837504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 44600470 - 44600535
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaa--gataaaataaagtgaaattgttttcata 89  Q
    |||||||||||| |||||| | |||||||| |||||  ||||||||||||| |||| |||||||||    
T  44600470 ataagtgcttatgtataagctatttctatagccaaaaagataaaataaagttaaatagttttcata 44600535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 6988061 - 6988106
Alignment:
Q  41 taagttgtttctataaccaaagataaaataaagtgaaattgttttc 86  Q
    |||||| |||||||||| |||||||||||||||| ||||| |||||    
T  6988061 taagttttttctataacaaaagataaaataaagtcaaattattttc 6988106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 25609727 - 25609799
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc--ataagctata 96  Q
    |||||||||||| |||||| | |||||||||  |||||||||||||||| || || |||||  ||||||||||    
T  25609727 ataagtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctata 25609799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 33192126 - 33192187
Alignment:
Q  28 aagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||||| ||  | ||||||||||  ||||||||||||||| ||| ||||||||||    
T  33192126 aagtgcttatataaaaactatttctataacataagataaaataaagtcaaactgttttcata 33192187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 39567847 - 39567892
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttt 84  Q
    |||||| | |||||||||| |||||||||||||||| |||||||||    
T  39567847 tataagatatttctataacaaaagataaaataaagttaaattgttt 39567892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 2400087 - 2400126
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataa 66  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  2400087 ataagtgcttatgtataagttgtttctataa-caaagataa 2400126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 14666486 - 14666542
Alignment:
Q  33 cttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| |||||||||||  ||||| |||||||||||||||| ||| || |||||||    
T  14666486 cttatacataagttgttttgataacaaaagataaaataaagtcaaactgatttcata 14666542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 29628881 - 29628837
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaata 70  Q
    |||||| |||||||| ||||| |||||||||| ||||||||||||    
T  29628881 ataagtacttatataaaagttatttctataacaaaagataaaata 29628837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 36114639 - 36114603
Alignment:
Q  49 ttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  36114639 ttctataacaaaagataaaataaagttaaattgtttt 36114603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 7244633 - 7244704
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctatat 97  Q
    |||||||||||| |||||| | |||||||| | |||||||||| ||||| ||| ||||||||||||||||||    
T  7244633 ataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcataagctatat 7244704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 39591594 - 39591543
Alignment:
Q  38 atataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  39591594 atataagttatttctataacaaaagataaaataaagtcaaattgttttcata 39591543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 21853255 - 21853197
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttt 84  Q
    ||||||| ||||||||||||| ||||||| || |||||||||||||||| |||||||||    
T  21853255 ataagtgattatatataagttatttctattacaaaagataaaataaagttaaattgttt 21853197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 28165023 - 28165081
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    ||||||||||| |||||||| |||||||||| ||||||||||| |||| ||||||||||    
T  28165023 taagtgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgtttt 28165081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 3241372 - 3241437
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataag 91  Q
    ||||||||||||||| ||| | |||||||||| ||| | |||||||||| ||| ||||||||||||    
T  3241372 ataagtgcttatatagaagctatttctataacaaaataaaaaataaagtcaaactgttttcataag 3241437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 35536044 - 35536101
Alignment:
Q  32 gcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| |||||| | ||||||||||  ||||||||||||||| ||||||||||||||    
T  35536044 gcttatgtataagctatttctataacataagataaaataaagtcaaattgttttcata 35536101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 992001 - 992048
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaag 73  Q
    |||||||||||  ||||||||||||||||||| ||| |||||||||||    
T  992001 ataagtgcttacgtataagttgtttctataacaaaaaataaaataaag 992048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 24973875 - 24973938
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||||||| || ||| | |||||||||| |||||||||||||| | ||||||||| ||||    
T  24973875 ataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaaattgtttccata 24973938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 42656444 - 42656499
Alignment:
Q  24 aaataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaat 79  Q
    |||||||  |||||||||||| | |||||||||| |||||||||||||||| ||||    
T  42656444 aaataagcacttatatataagctatttctataacaaaagataaaataaagtcaaat 42656499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 45813315 - 45813256
Alignment:
Q  30 gtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||| |||||| | |||||||| | |||||||||||||||| || |||||||||||    
T  45813315 gtgcttatttataagctatttctataccaaaagataaaataaagtcaacttgttttcata 45813256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 48157251 - 48157200
Alignment:
Q  34 ttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||| ||||| || |||||||||  |||||||||||||||||||||||||||    
T  48157251 ttatgtataacttatttctataataaaagataaaataaagtgaaattgtttt 48157200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 5269461 - 5269515
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaatt 80  Q
    |||||||||||||||||| || ||||| |||  |||||||||||||||| |||||    
T  5269461 ataagtgcttatatataaattatttctttaataaaagataaaataaagtcaaatt 5269515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 28178913 - 28178963
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| | |||||||||| |||||||||||||||| | ||||||||||||    
T  28178913 tataagctatttctataacaaaagataaaataaagtcatattgttttcata 28178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 33894555 - 33894616
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||| |||||| | |||||||||| ||||||||||| |||| ||| ||||||||||    
T  33894555 taagtgcttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcata 33894616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 43153028 - 43152982
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||||| | |||||||||| |||||||||||||||| ||||||||||    
T  43153028 tataagctatttctataacaaaagataaaataaagttaaattgtttt 43152982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 1417221 - 1417258
Alignment:
Q  52 tataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  1417221 tataacaaaagataaaataaagtcaaattgttttcata 1417258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 9527227 - 9527166
Alignment:
Q  28 aagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||||||| | | | |||||||| ||||||| |||||||| ||| ||||||||||    
T  9527227 aagtgcttatatatacgctatatctataacaaaagatataataaagtcaaactgttttcata 9527166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 12835054 - 12835013
Alignment:
Q  48 tttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| ||| |||||||||||||||| ||||||||||||||    
T  12835054 tttctacaacaaaagataaaataaagtcaaattgttttcata 12835013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 30456567 - 30456526
Alignment:
Q  48 tttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| ||| |||||||||||||||| ||||||||||||||    
T  30456567 tttctaaaacaaaagataaaataaagtcaaattgttttcata 30456526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 23918903 - 23918951
Alignment:
Q  41 taagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| | ||||| || |||||||||||||||| ||||||||||||||    
T  23918903 taagttatctctattacaaaagataaaataaagtcaaattgttttcata 23918951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 27121718 - 27121662
Alignment:
Q  33 cttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||| |||||| | |||||||||  || ||||||||||||| ||||||||||||||    
T  27121718 cttatgtataagatatttctataataaatgataaaataaagtcaaattgttttcata 27121662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 30496635 - 30496695
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc 86  Q
    ||||||| |||| |||||  | |||||||||| ||| |||||||||||| |||||||||||    
T  30496635 ataagtgtttatgtataaactatttctataacaaaatataaaataaagtcaaattgttttc 30496695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 46091530 - 46091590
Alignment:
Q  29 agtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||||  ||||| | || ||||||| |||||||||||||| | ||||||||||||||    
T  46091530 agtgcttatgcataagctattcctataacgaaagataaaataaaataaaattgttttcata 46091590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 46825052 - 46825092
Alignment:
Q  49 ttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||  |||||||||||||||| ||||||||||||||    
T  46825052 ttctataaaaaaagataaaataaagtcaaattgttttcata 46825092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 16790227 - 16790181
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaa 72  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  16790227 ataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 39971250 - 39971320
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctata 96  Q
    |||||||||||| ||||||||  || |||||| |||||||||||||||  |||||||||| ||||||||||    
T  39971250 ataagtgcttatgtataagttacttatataacaaaagataaaataaagccaaattgttttaataagctata 39971320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 10101601 - 10101552
Alignment:
Q  40 ataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  10101601 ataagttatttctataacaaaagataaaataaagttaaattgttttcata 10101552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 10212526 - 10212477
Alignment:
Q  40 ataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  10212526 ataagttatttctataacaaaagataaaataaagttaaattgttttcata 10212477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 22214820 - 22214757
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||| ||| ||||| || |||||||||| || ||||||||||||||||||||| ||||||    
T  22214820 ataagtgcgtatgtataaattatttctataacaaaggataaaataaagtgaaattgtattcata 22214757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 44374783 - 44374720
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||||||| |||||| | | ||| |||| |||||||||||||||| ||||||||||||||    
T  44374783 ataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaaattgttttcata 44374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 42808923 - 42808969
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||||    
T  42808923 tataagctgtttctataacaaaagataaaataaagttaaattgtttt 42808969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 48365010 - 48364956
Alignment:
Q  34 ttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcat 88  Q
    |||| |||||||| |||| ||||| |||||||||||||||| |||||||||||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaaataaagtcaaattgttttcat 48364956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 1395604 - 1395665
Alignment:
Q  28 aagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| ||| |||||| | |||||||||| |||||||||||||||| ||||| ||||||||    
T  1395604 aagtgcatatgtataagctatttctataacaaaagataaaataaagtcaaattattttcata 1395665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 12985459 - 12985393
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||| |||| |||||||||||||||||||  || |||||||||||  ||| ||||||||||||||||    
T  12985459 taagtgtttatgtataagttgtttctataac--aaaataaaataaagataaactgttttcataagctat 12985393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 15304464 - 15304423
Alignment:
Q  48 tttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||||| |||||||||||||||| ||||||||||||||    
T  15304464 tttctataacaaaagataaaataaagttaaattgttttcata 15304423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 16790495 - 16790426
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||||||||| |||||| | ||| |||||| | |||||||||||| | ||||| ||||||||||||||    
T  16790495 ataagtgcttatgtataagctatttttataacaacagataaaataaaatcaaattattttcataagctat 16790426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 32095320 - 32095271
Alignment:
Q  36 atatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    ||||||||||| |||||||||| ||||||||||| |||| ||||||||||    
T  32095320 atatataagttatttctataacaaaagataaaattaagttaaattgtttt 32095271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 41159040 - 41159088
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagt 74  Q
    |||||||||||| |||||||| || ||||||| ||||||||||||||||    
T  41159040 ataagtgcttatgtataagttattcctataactaaagataaaataaagt 41159088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 2128382 - 2128331
Alignment:
Q  34 ttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||| |||||| | |||||||||| |||||||||||||||| ||||||||||    
T  2128382 ttatgtataagctatttctataacaaaagataaaataaagttaaattgtttt 2128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 10357364 - 10357427
Alignment:
Q  27 taagtgcttatata-taagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||||||| | |||||| |||||||||| ||||||||||||| || ||||| ||||||||    
T  10357364 taagtgcttatagaataagttatttctataacaaaagataaaataatgttaaatttttttcata 10357427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 25195377 - 25195424
Alignment:
Q  48 tttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||||||| |||||||||||||||| ||||| |||||||| |||||    
T  25195377 tttctataacaaaagataaaataaagtcaaattattttcatatgctat 25195424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 38462212 - 38462275
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||| |||| |||||| | |||||||| | |||||||||||||||| ||| ||||||||||    
T  38462212 ataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcata 38462275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 49587054 - 49586992
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||||||  |||||| | |||||||||| |||||||||||||||| ||| ||||||||||    
T  49587054 ataagtgcttac-tataagctatttctataacaaaagataaaataaagtcaaactgttttcata 49586992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 3182500 - 3182438
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| |||| ||||||||  |||||||   |||||||||||||||| ||||||||||||||    
T  3182500 taagtgtttatgtataagttacttctatagaaaaagataaaataaagtcaaattgttttcata 3182438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 20192744 - 20192682
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||| |||||| | ||| |||||| |||||||||||||||| |||  |||||||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcata 20192682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 33882972 - 33883018
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    ||||| || |||||||||| |||||||||||||||||||||| ||||    
T  33882972 tataaattatttctataacaaaagataaaataaagtgaaattatttt 33883018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 42809245 - 42809295
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| | |||||||||| |||||||||||| ||| ||||||||||||||    
T  42809245 tataagctatttctataacaaaagataaaatatagttaaattgttttcata 42809295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 8007828 - 8007771
Alignment:
Q  32 gcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| |||||| |||||||||||| ||||||||| |||||| ||| |||| |||||    
T  8007828 gcttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcata 8007771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 20174027 - 20173982
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataa 71  Q
    |||||||||||| ||| |||| |||||||||| |||||||||||||    
T  20174027 ataagtgcttatgtattagttatttctataacaaaagataaaataa 20173982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 26990687 - 26990728
Alignment:
Q  48 tttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||||| |||||||||||||||| ||||| ||||||||    
T  26990687 tttctataacaaaagataaaataaagtcaaattcttttcata 26990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 36646511 - 36646458
Alignment:
Q  36 atatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||| | ||||||| || ||||||||||||||||  |||||||||||||    
T  36646511 atatataagctatttctatgacaaaagataaaataaagtataattgttttcata 36646458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 36783451 - 36783410
Alignment:
Q  48 tttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||| | |||||||||||||||| ||||||||||||||    
T  36783451 tttctataccaaaagataaaataaagtaaaattgttttcata 36783410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 38902018 - 38902075
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttt 84  Q
    |||||||||| ||||||||| ||| |||| | || ||||||||||||||||| |||||    
T  38902018 taagtgcttacatataagttatttgtatagcaaacgataaaataaagtgaaactgttt 38902075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 40122884 - 40122827
Alignment:
Q  33 cttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataa 90  Q
    ||||| |||||| | |||| ||||| |||||||||||||||| ||| |||||||||||    
T  40122884 cttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcataa 40122827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 41028990 - 41028929
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttca 87  Q
    |||||||||||| |||||| | |||||||||| ||||| |||||||||| ||  ||||||||    
T  41028990 ataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaatctgttttca 41028929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 44284197 - 44284128
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||| || || |||||| | |||||||||| ||| |||||| ||||| ||| ||||||||||||||||    
T  44284197 ataagtactaatgtataagctatttctataacaaaaaataaaacaaagtcaaactgttttcataagctat 44284128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 51455891 - 51455854
Alignment:
Q  52 tataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  51455891 tataacaaaagataaaataaagtgaaattgttgtcata 51455854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 21862315 - 21862251
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaata-aagtgaaattgttttcata 89  Q
    ||||||||||   |||||| ||||||||| || |||||||||||| |||| ||||||||||||||    
T  21862315 ataagtgcttgcgtataagctgtttctattacaaaagataaaatacaagtcaaattgttttcata 21862251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 26878048 - 26878104
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgt 82  Q
    |||||||||||| ||||| ||||||||||| | ||||||||| ||| || |||||||    
T  26878048 ataagtgcttatgtataaattgtttctatagcaaaagataaactaaggttaaattgt 26878104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 2205698 - 2205638
Alignment:
Q  35 tatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||||||| | |||||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  2205698 tatatataagctatttctaaaacaaaagataaaacaaagtcaaattgttttcataagctat 2205638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 24836330 - 24836278
Alignment:
Q  34 ttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc 86  Q
    |||| |||||||| |||||||||| |||||||||||||||| |||||||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttc 24836278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 4248889 - 4248944
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattg 81  Q
    ||||||||||||||||||| | |||| ||||| |||||||||||||||| ||||||    
T  4248889 ataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaaattg 4248944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 11340764 - 11340701
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||||||| || || ||||||||    
T  11340764 ataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcata 11340701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 29274363 - 29274305
Alignment:
Q  31 tgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||| |||||| | |||||||| | |||||||||||||||| ||||||||||||||    
T  29274363 tgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcata 29274305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 264302 - 264362
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc 86  Q
    ||||||||||||||||||| | |||||| | | |||||||||||||||| |||| ||||||    
T  264302 ataagtgcttatatataagctatttctaaagcaaaagataaaataaagttaaatcgttttc 264362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 507154 - 507210
Alignment:
Q  29 agtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    ||||||||| ||||| || |||||||||| |||||||||||||||| | ||||||||    
T  507154 agtgcttatgtataaattatttctataacaaaagataaaataaagttagattgtttt 507210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 9559680 - 9559620
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc 86  Q
    ||||| |||||| |||||||| |||||||| | |||||||||||||| | |||||||||||    
T  9559680 ataagcgcttatgtataagttatttctatagcaaaagataaaataaatttaaattgttttc 9559620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 29940729 - 29940789
Alignment:
Q  28 aagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcat 88  Q
    |||||||||  |||||| | |||||||||| |||||||||||||||| || ||||||||||    
T  29940729 aagtgcttaagtataagctttttctataacaaaagataaaataaagtcaatttgttttcat 29940789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 31583645 - 31583701
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttcataagctat 95  Q
    |||||| | |||||||||| | ||||||||| |||| ||||||||||||||||||||    
T  31583645 tataagctatttctataacaagagataaaatgaagtcaaattgttttcataagctat 31583701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 4006645 - 4006704
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    ||||||||||||  ||||| | |||||||||| || ||||||||||||| ||||||||||    
T  4006645 ataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttt 4006704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 22742297 - 22742360
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||| ||||| |||||| | ||| |||||| || ||||||||||||| ||||||||||||||    
T  22742297 ataagttcttatctataagctatttgtataacaaaggataaaataaagtcaaattgttttcata 22742360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 33068702 - 33068655
Alignment:
Q  24 aaataagtgcttatatataagttgtttctataaccaaagataaaataa 71  Q
    |||||| ||||||| |||||||| |||||||||| |||||||||||||    
T  33068702 aaataaatgcttatgtataagttatttctataacaaaagataaaataa 33068655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 5731556 - 5731594
Alignment:
Q  59 aaagataaaataaagtgaaattgttttcataagctatat 97  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  5731556 aaagataaaatgaagtcaaattgttttcataagctatat 5731594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 10728576 - 10728626
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||| |||||| | | |||||||||||||||| ||||||||||||||    
T  10728576 tataagttatttctaaagcaaaagataaaataaagttaaattgttttcata 10728626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 24774690 - 24774748
Alignment:
Q  27 taagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||||||||||||||||  | |||||||||| ||| |||||||||||| ||| ||||||    
T  24774690 taagtgcttatatataaactatttctataacaaaatataaaataaagtcaaactgtttt 24774748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 28621236 - 28621190
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgtttt 85  Q
    ||||| |||||| |||||| |||||||||||||||| ||||||||||    
T  28621236 tataaattgtttttataacaaaagataaaataaagttaaattgtttt 28621190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 31671014 - 31670968
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaa 72  Q
    ||||||||||||||||||||  |||||||||| | ||||||||||||    
T  31671014 ataagtgcttatatataagtcatttctataacaatagataaaataaa 31670968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 9093695 - 9093623
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc--ataagctata 96  Q
    ||||| ||||||  ||||| | |||||||| | |||||||||||||||| |||||||||||  ||||||||||    
T  9093695 ataagcgcttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctata 9093623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 85
Target Start/End: Complemental strand, 9582711 - 9582678
Alignment:
Q  52 tataaccaaagataaaataaagtgaaattgtttt 85  Q
    |||||| |||||||||||||||||||||||||||    
T  9582711 tataacaaaagataaaataaagtgaaattgtttt 9582678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 7713983 - 7714019
Alignment:
Q  53 ataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  7713983 ataacaaaagataaaataaagtcaaattgttttcata 7714019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 12631543 - 12631587
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaata 70  Q
    |||||| ||||| |||||| | |||||||||||||||||||||||    
T  12631543 ataagttcttatgtataagctatttctataaccaaagataaaata 12631587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 20672004 - 20671944
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttc 86  Q
    ||||||| |||| |||||| | |||||| | | |||||||||||||||| |||||||||||    
T  20672004 ataagtgattatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttc 20671944  T

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Target: scaffold0549 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 1863 - 1800
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||||||| || || ||||||||    
T  1863 ataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcata 1800  T

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Target: scaffold0549; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 3953 - 3890
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||||||| || || ||||||||    
T  3953 ataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcata 3890  T

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Target: scaffold0590 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 1213 - 1165
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagt 74  Q
    |||||||||||| |||||| | |||||||||| ||||||||||||||||    
T  1213 ataagtgcttatgtataagctatttctataacaaaagataaaataaagt 1165  T

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Target: scaffold0275 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 2762 - 2810
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagt 74  Q
    |||||||||||| |||||| | |||||||||| ||||||||||||||||    
T  2762 ataagtgcttatgtataagctatttctataacaaaagataaaataaagt 2810  T

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Target: scaffold0085 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 34136 - 34073
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||| |||||||||||||| ||| | |||||  |||||||||||||||| ||||| ||||||||    
T  34136 ataactgcttatatataaggtgtatttataataaaagataaaataaagtcaaattattttcata 34073  T

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Target: scaffold0103 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 51512 - 51562
Alignment:
Q  39 tataagttgtttctataaccaaagataaaataaagtgaaattgttttcata 89  Q
    |||||||| ||| |||||| ||| |||||||||||| ||||||||||||||    
T  51512 tataagttatttttataacaaaatataaaataaagttaaattgttttcata 51562  T

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Target: scaffold0100 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 42548 - 42592
Alignment:
Q  26 ataagtgcttatatataagttgtttctataaccaaagataaaata 70  Q
    |||||||||||| |||||||  |||||||||| ||||||||||||    
T  42548 ataagtgcttatgtataagtcatttctataacaaaagataaaata 42592  T

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