View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
	Query
	Query hiting target	Query hiting target's complemental strand
	Query's complemental strand hiting target	Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0272_high_36 (Length: 237)

Name: NF0272_high_36

Description: NF0272

Algorithm: BLASTN 2.2.26 [Sep-21-2011]

Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)

[»] NF0272_high_36

[»] chr7 (1 HSPs)

Alignment Details

Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 1)

Name: chr7

Description:

Target: chr7; HSP #1

Raw Score: 120; E-Value: 2e-61

Query Start/End: Original strand, 81 - 237

Target Start/End: Original strand, 49082847 - 49083003

Alignment:

Q	81	acagattatcatgcctcctcaaaacataacatttccccagaataaacttgatgttgctgcagaaaacaatgctgcaagcaatcattctagtggttccgtg	180	Q
		\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|
T	49082847	acagattaccatgcctcctcaaaatataacatttccacagaataaacttgatgttgctgcagaaaacaatgctgcaagcaatcattctagtggttctgtg	49082946	T

Q	181	gcttccacacacaaaaatattgaatgcagtgnnnnnnntagtgagcctcatgtaagt	237	Q
		\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
T	49082947	gcttccacacacaaaaatattgaatgcagtgaaaaaaatagtgagcctcatgtaagt	49083003	T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

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