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Query
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Query hiting target's complemental strand
Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0272_low_25 (Length: 315)
Name: NF0272_low_25
Description: NF0272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0272_low_25
[» ] scaffold0181 (3 HSPs)
[» ] scaffold0178 (3 HSPs)
Alignment Details
Target: chr6 (Bit Score: 113; Significance: 3e-57; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 305120 - 304976
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccgggtgtgttataaaggttatttttgta
116
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||
T
305120
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggatgtattataaaggttatttttgta
305021
T
Q
117
tttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||| |||||||| ||||||||||||||||||
T
305020
tttttagggggcctaaagagatattgggggggcctaaaaagcaat
304976
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 19803539 - 19803376
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccgg--------------gtgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
T
19803539
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggtatgtaactacggggtgtattataa
19803440
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
T
19803439
aggttatttttgtattttcagggggcctaaagagatattgagggggcctaaaaagcaatattca
19803376
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 33775729 - 33775566
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||
T
33775729
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataa
33775630
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
33775629
aggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatcttca
33775566
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 165
Target Start/End: Original strand, 33776153 - 33776314
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
33776153
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
33776252
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattc
165
Q
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
T
33776253
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatattc
33776314
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 644261 - 644098
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| ||| ||||||
T
644261
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactatcggtatgtaactaccgaatgtattataa
644162
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
644161
aggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatcttca
644098
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 305552 - 305709
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
305552
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
305651
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
305652
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaat
305709
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 644685 - 644842
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
644685
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
644784
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||
T
644785
ggttatttttgtatttttagggggcctaaagagatattgggggggtctaaaaagcaat
644842
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 26276090 - 26276228
Alignment:
Q
24
ttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgc--------------actaccgggtgtgttataaaggttat
109
Q
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| |||||||||||||
T
26276090
ttgaaaatgtgcctccggtatgtacataccgaaggtttaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaaggttat
26276189
T
Q
110
ttttgtatttttagggggcctaaaaagatattgaggggg
148
Q
||||||||||||||||| |||||| |||||||| |||||
T
26276190
ttttgtatttttaggggacctaaagagatattggggggg
26276228
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 26275495 - 26275431
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
T
26275495
ttataaaggttatttttgtatttttagagggcctaaagagatattgagggggcctaaaaagcaat
26275431
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 161
Target Start/End: Complemental strand, 22509899 - 22509758
Alignment:
Q
33
tgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcac----------------taccgggtgtgttataaaggttatttttgta
116
Q
||||||||| |||||||||||||||||||||||| |||||| ||||||||||| |||||| ||| ||||||| ||||||||||||
T
22509899
tgcctccggcatgtacataccgaaggtttaaaatgtgaaaa-ttaaaatgcactaccggtatgtaactataccggatgtattataaacgttatttttgta
22509801
T
Q
117
tttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||| ||||| ||||||| ||||||||||||||||||
T
22509800
tttttagggggtctaaagagatatt--gggggcctaaaaagcaat
22509758
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 23950049 - 23950113
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||| |||||||||||||||||||||||| |||||||| || ||||||||||||||
T
23950049
ttataaaggttaattttgtatttttagggggcctaaagagatattggaggagcctaaaaagcaat
23950113
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3 (Bit Score: 94; Significance: 7e-46; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 1194254 - 1194094
Alignment:
Q
20
aaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccgg--------------gtgtgttataaagg
105
Q
||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
T
1194254
aaatttgtaaatgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggtatgtaactaccgggtgtattataaagg
1194155
T
Q
106
ttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
T
1194154
ttatttttgtatttttggggggcctaaagagatattgagggggcctaaaaagcaatattca
1194094
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 53303108 - 53302947
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
53303108
gaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
53303009
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattc
165
Q
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
T
53303008
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatattc
53302947
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 11503838 - 11503680
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||
T
11503838
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataa
11503739
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
11503738
aggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaat
11503680
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 48222910 - 48223072
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
48222910
gaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
48223009
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
48223010
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatcttca
48223072
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 11504268 - 11504426
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcac--------------taccgggtgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||| ||||||
T
11504268
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcacatccgggatgtaactaccggatgtattataa
11504367
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||
T
11504368
aggttatttttgtatttttaaggggcctaaaaagatattgggggagcctaaaaagcaat
11504426
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 47861936 - 47861779
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcac--------------taccgggtgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||| ||||||
T
47861936
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcacatccggtatgtaactaccggatgtattataa
47861837
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
47861836
aggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaat
47861779
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 48222485 - 48222327
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactacc--------------gggtgtgttataa
102
Q
|||||||||| ||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||| ||||||
T
48222485
tgaaaatttgtaaatatgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactacctgtatgtaactaccggatgtattataa
48222386
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
48222385
aggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaat
48222327
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 47862369 - 47862525
Alignment:
Q
19
aaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaag
104
Q
|||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||||
T
47862369
aaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaag
47862468
T
Q
105
gttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
T
47862469
gttatttttgtatttttagggggcctaaagagatattggaggggcctaaaaagcaat
47862525
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 53303541 - 53303679
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||| | |||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||
T
53303541
gaaaatttgtaaatgtgcccctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtgttataaa
53303640
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattg
142
Q
|||||||||||||||||||||||||||||| ||||||||
T
53303641
ggttatttttgtatttttagggggcctaaagagatattg
53303679
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 6588611 - 6588548
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
T
6588611
ttataaaggttatttttgtatttttagggggcctaaagagatattgaggggg-ctaaaaagcaat
6588548
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 30733672 - 30733608
Alignment:
Q
102
aaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
T
30733672
aaggttaattttgtatttttagggggcctaaagagatattggaggggcctaaaaagcaatcttca
30733608
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 11195828 - 11195867
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaag
136
Q
|||||||||||||||||||||||||||||||||| |||||
T
11195828
ttataaaggttatttttgtatttttagggggccttaaaag
11195867
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 11195718 - 11195783
Alignment:
Q
24
ttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactacc
89
Q
||||||| ||||||| |||||||||||| |||||||| ||||| |||||| | |||||| ||||||
T
11195718
ttgaaaatgtgcctctggtatgtacatatcgaaggttcaaaatgtgaaaaataaaaatgaactacc
11195783
T
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HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 6589314 - 6589373
Alignment:
Q
101
aaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||| ||||||| | |||||||||| |||||| |||||||||||||| |||||
T
6589314
aaaggttattttcgtatttt-acggggcctaaagagatatcgagggggcctaaaaggcaat
6589373
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 25749094 - 25749126
Alignment:
Q
110
ttttgtatttttagggggcctaaaaagatattg
142
Q
|||||||||||||||||||||||||||||||||
T
25749094
ttttgtatttttagggggcctaaaaagatattg
25749126
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 21)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 35813954 - 35814092
Alignment:
Q
23
tttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccgggtgtgttataaaggttatttttgtattttta
122
Q
|||||||| |||||| |||||||||||||||| |||| ||||| ||||| |||||||| |||||||| || ||||||||||||||||||||||||||
T
35813954
tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaagttaaaatgaactaccggaagtcttataaaggttatttttgtattttta
35814053
T
Q
123
gggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||| |||||||||||||||||||||||||||
T
35814054
gggggcctaaagagatattgagggggcctaaaaagcaat
35814092
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 36180314 - 36180472
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||
T
36180314
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataa
36180413
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
36180414
aggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaat
36180472
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 11625877 - 11626035
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgc--------------actaccgggtgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||| ||||||
T
11625877
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataa
11625976
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
11625977
agattatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaat
11626035
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 249842 - 249685
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccg--------------ggtgtgttataaa
103
Q
||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| | ||| |||||||
T
249842
gaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccgatatgtaactaccggatgtattataaa
249743
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||
T
249742
ggttatttttgtatttttagggggtctaaagagatattgggggggcctaaaaagcaat
249685
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 47708418 - 47708571
Alignment:
Q
22
atttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactacc--------------gggtgtgttataaaggtt
107
Q
||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||| |||||||||||
T
47708418
atttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccagtatgtaactaccggatgtattataaaggtt
47708517
T
Q
108
atttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
47708518
atttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaat
47708571
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 250267 - 250429
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactacc--------------gggtgtgttataa
102
Q
|||||||||| ||| ||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||| || ||| ||||||
T
250267
tgaaaatttgtaaatatgcctccggtatgtacatatcgaaggtgtaaaatgtgaaaatttaaaatgcactacctgtatgtaactaccggatgtattataa
250366
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
250367
aggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatcttca
250429
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 11625445 - 11625284
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
11625445
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
11625346
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
11625345
tgttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatcttca
11625284
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 36179875 - 36179719
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcacta--------------ccgggtgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| |||| ||| |||||||
T
36179875
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatttgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
36179776
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||| |||||||| |||||||| |||| |||||||||||||
T
36179775
ggttatttttgtatttttaggaggcctaaagagatattg-ggggacctaaaaagcaat
36179719
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 45880822 - 45880758
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
T
45880822
ttataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaat
45880758
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 9088440 - 9088503
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
T
9088440
tataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaat
9088503
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 45881506 - 45881569
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
T
45881506
tataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaat
45881569
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 9087752 - 9087692
Alignment:
Q
101
aaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
T
9087752
aaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaat
9087692
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 32517560 - 32517624
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
T
32517560
ttataaaggttatttttgtatttttagggggcctaaagagatattgaggggttctaaaaagcaat
32517624
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 32516876 - 32516813
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||
T
32516876
tataaaggttatttttgtatttttaggggacttaaagagatattgagggggcctaaaaagcaat
32516813
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 35813358 - 35813296
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
T
35813358
tataaaggttatttttgtatttttagggggcctaaagagatattga-ggggcctaaaaagcaat
35813296
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 42308890 - 42308954
Alignment:
Q
93
tgtgttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaag
157
Q
|||||| | ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
T
42308890
tgtgttgtgaaggttatttttgtatttttaggaggcctaaaaagatattggaggggcctaaaaag
42308954
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 51590749 - 51590825
Alignment:
Q
85
ctaccgggtgtgttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||| ||| |||| |||| |||||||||| |||||||| ||||||| |||||||| ||||| ||||||||||||
T
51590749
ctaccggatgtattattaagggtatttttgtagttttagggtgcctaaagagatattgtgggggtctaaaaagcaat
51590825
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 29112992 - 29113063
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactac
88
Q
|||||||||||||| ||||||||| |||||||| | ||||||| ||||| || ||||||||||||||||||
T
29112992
tgaaaatttgaaaaagtgcctccgatatgtacacattgaaggttcaaaatgtgtaaatttaaaatgcactac
29113063
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 27039099 - 27039155
Alignment:
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaa
160
Q
|||||| ||| ||||||||||||||| ||||||||||||| ||||||||||| |||||
T
27039099
aggttaatttcgtatttttagggggcttaaaaagatattg-gggggcctaaagagcaa
27039155
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 45881418 - 45881485
Alignment:
Q
24
ttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccgg
91
Q
||||||| |||||| |||||||||||||||| |||| ||||| ||||| |||||||| ||||||||
T
45881418
ttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactaccgg
45881485
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 42308798 - 42308840
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggt
59
Q
||||||| |||||| |||||||||||||||||||||||||||
T
42308798
tgaaaatgtgaaaatatgcctccggtatgtacataccgaaggt
42308840
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 16)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 29555668 - 29555505
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcac--------------taccgggtgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||| ||||||
T
29555668
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcacatccgggatgtaactaccggatgtattataa
29555569
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
29555568
aggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatcttca
29555505
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 5156712 - 5156558
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcacta--------------ccgggtgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||| ||| ||||||
T
5156712
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataa
5156613
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaag
157
Q
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
T
5156612
aggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaag
5156558
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 28824284 - 28824122
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
28824284
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
28824185
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
28824184
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatcttca
28824122
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 5157136 - 5157293
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
5157136
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
5157235
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
5157236
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaat
5157293
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 38376366 - 38376209
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
38376366
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
38376267
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
38376266
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaat
38376209
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 44446127 - 44445970
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
44446127
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
44446028
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
44446027
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaat
44445970
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 44446551 - 44446713
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccgg-gtgt------------gttataaa
103
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
44446551
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtttataaa
44446650
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
|||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||
T
44446651
ggttatttttgtatttttagggggcctaaagagatattgggggggcctgaaaagcaatcttca
44446713
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 28824708 - 28824870
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataa
102
Q
|||||||||| ||| |||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||
T
28824708
tgaaaatttgtaaatgtgcctccagtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataa
28824807
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
28824808
aggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatcttca
28824870
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 29556099 - 29556256
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||| ||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
29556099
gaaaatttgtaaatgtgtctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
29556198
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||
T
29556199
ggttatttttgtatttttagggggcctaaagagatattggggggacctaaaaagcaat
29556256
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 38376798 - 38376954
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgc--------------actaccgggtgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||| ||||||
T
38376798
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcacatccggtatgtaactaccggatgtattataa
38376897
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|| ||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||
T
38376898
agattatttttgta-ttttagggggcctaaagagatattg-gggggcctaaaaagcaat
38376954
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 5157961 - 5158037
Alignment:
Q
85
ctaccgggtgtgttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||| ||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
T
5157961
ctaccggatgtcttataaaggttatttttgtatttttaggaggcctaaagagatattgagggggcctaaaaagcaat
5158037
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 39774316 - 39774379
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
T
39774316
tataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaat
39774379
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 39773632 - 39773568
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
T
39773632
ttataaaggttatttttgaatttttagggggcctaaagagatattgagggggcctaaaaagcaat
39773568
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 5157388 - 5157321
Alignment:
Q
24
ttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccgg
91
Q
||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
T
5157388
ttgaaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccgg
5157321
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 14857914 - 14858000
Alignment:
Q
75
ttaaaatgcactaccgggtgtgttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||| |||||||| ||| |||| |||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||
T
14857914
ttaaaataaactaccggatgtattattaagggcatttttgtatctttagggggcctaaagagatattgagggggcctaaaaagcaat
14858000
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 41721169 - 41721117
Alignment:
Q
105
gttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaag
157
Q
|||| |||||| |||||| |||||||||||||||| |||||| |||||||||
T
41721169
gttaattttgtcattttagagggcctaaaaagatatggaggggacctaaaaag
41721117
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5 (Bit Score: 81; Significance: 4e-38; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 31230021 - 31230184
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||
T
31230021
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataa
31230120
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
31230121
aggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatcttca
31230184
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 4276156 - 4276318
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
4276156
gaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
4276255
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
4276256
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatcttca
4276318
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 4275725 - 4275562
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||
T
4275725
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataa
4275626
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||
T
4275625
aggttatttttgtatttttagggggcctaaagagatattaggggggcctaaaaagcaatcttca
4275562
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 2601423 - 2601585
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccg--------------ggtgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| | ||| ||||||
T
2601423
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccagatgtattataa
2601522
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
|||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||| ||||
T
2601523
aggttatttttgtatttttaggaggcctaaagagatattg-gggggcctaaaaagcaatcttca
2601585
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 2600991 - 2600835
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
2600991
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
2600892
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
2600891
ggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaat
2600835
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 31229589 - 31229432
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
31229589
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
31229490
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||
T
31229489
ggttatttttgtacttttagggggcctaaagagatattgggggggcctaaaaagcaat
31229432
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 177 - 254
Target Start/End: Original strand, 6858152 - 6858229
Alignment:
Q
177
ttaagtatggatcaagaatggacttctaccatattcttaaaggattcaaatcctttaacatttgaagtgtcactcctt
254
Q
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
T
6858152
ttaagtatggatcaagaatcaacttctaccatattcttaaaggactcaaatcctttaacatttgaagtctcactcctt
6858229
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 3341651 - 3341588
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
T
3341651
tataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaat
3341588
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 3358560 - 3358497
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
T
3358560
tataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaat
3358497
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 3342336 - 3342399
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
T
3342336
tataaaggttatttttgtatttttagggggtctaaagagatattgagggggcctaaaaagcaat
3342399
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 3359245 - 3359308
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
T
3359245
tataaaggttatttttgtatttttagggggtctaaagagatattgagggggcctaaaaagcaat
3359308
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 5233835 - 5233770
Alignment:
Q
92
gtgtgttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaag
157
Q
||||||| | |||||||||||||||||||||| |||||||||||||||||| |||||||||||||
T
5233835
gtgtgttgtgaaggttatttttgtatttttagagggcctaaaaagatattggaggggcctaaaaag
5233770
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 11377361 - 11377287
Alignment:
Q
86
taccgggtgtgttataaaggttattttt-gtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||| ||| ||||||| ||||||||| |||||||||||||| | ||| ||||||| ||||||||||||||||||
T
11377361
taccggatgtcttataaaagttattttttgtatttttagggggaccaaagagatatt--gggggcctaaaaagcaat
11377287
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 5233928 - 5233886
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggt
59
Q
||||||| |||||| |||||||||||||||||||||||||||
T
5233928
tgaaaatgtgaaaatatgcctccggtatgtacataccgaaggt
5233886
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 11377009 - 11376944
Alignment:
Q
97
ttataaaggttattttt-gtatttttag-ggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||| |||||||||| |||| | ||| |||||||| ||||||||||||||||||
T
11377009
ttataaaggttattttttgtatttttaggggggaccaaagagatattg-gggggcctaaaaagcaat
11376944
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 20)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 51539982 - 51539819
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||
T
51539982
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataa
51539883
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
51539882
aggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatcttca
51539819
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 4206366 - 4206204
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
4206366
gaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
4206267
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
4206266
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatcttca
4206204
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 4206791 - 4206954
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactacc--------------gggtgtgttataa
102
Q
|||||||||| ||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||| ||||||
T
4206791
tgaaaatttgtaaatatgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactacctgtatgtaactaccggatgtattataa
4206890
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
4206891
aggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatcttca
4206954
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 39232264 - 39232101
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||
T
39232264
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataa
39232165
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
T
39232164
aggttatttttgtatttttagggggcctaaagagatattggaggggcctaaaaagcaatcttca
39232101
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 51540414 - 51540571
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
51540414
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
51540513
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
51540514
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaat
51540571
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 49604001 - 49604163
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccgg-gtgt------------gttataaa
103
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
49604001
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtttataaa
49604100
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
|||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||
T
49604101
ggttatttttgtatttttagggggcctaaagagatattgggggggcctgaaaagcaatcttca
49604163
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 49603577 - 49603420
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
49603577
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
49603478
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||
T
49603477
ggttatttttgtatttttagggggcttaaagagatattgggggggcctaaaaagcaat
49603420
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 2519710 - 2519560
Alignment:
Q
24
ttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcacta--------------ccgggtgtgttataaaggttat
109
Q
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||| |||||||||||||
T
2519710
ttgaaaatgtgcctccggtatgtacataccgaaggtttaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaaggttat
2519611
T
Q
110
ttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||| |||||||||| |||||||| | ||||||||||||||||
T
2519610
ttttgtatttttaaggggcctaaagagatattg-gagggcctaaaaagcaat
2519560
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 39232695 - 39232851
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgc--------------actaccgggtgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||| |||||||
T
39232695
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
39232794
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
39232795
gattatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaat
39232851
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 46513595 - 46513736
Alignment:
Q
33
tgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaaggttatttttgtatt
118
Q
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| |||||||||||||
T
46513595
tgcctccggtatgcacataccgaaggtttaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaagattatttttgtatt
46513694
T
Q
119
tttagggggcctaaaaagatattgagggggcctaaaaagcaa
160
Q
||||||||||||||| ||||||| |||||||||||||||||
T
46513695
tttagggggcctaaagagatatttggggggcctaaaaagcaa
46513736
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 2520305 - 2520369
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
T
2520305
ttataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaat
2520369
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 29379788 - 29379725
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
T
29379788
tataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaat
29379725
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 29380472 - 29380536
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
T
29380472
ttataaaggttatttttgtatttttaggggacctaaagagatattgagggggcctaaaaagcaat
29380536
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 25699353 - 25699307
Alignment:
Q
100
taaaggttatttttgtatttttagggggcctaaaaagatattgaggg
146
Q
||||||||||||| |||||||||||||||||||| ||||||||||||
T
25699353
taaaggttattttcgtatttttagggggcctaaagagatattgaggg
25699307
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 26355290 - 26355228
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||| |||| ||||||||| |||||||||||||| |||||||| || |||||||||||||||
T
26355290
tataaaagttaattttgtattattagggggcctaaacagatattg-ggaggcctaaaaagcaat
26355228
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 2528674 - 2528734
Alignment:
Q
101
aaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaata
162
Q
||||| |||||| | ||||||||||| |||||| ||||||| ||||||||||||||||||||
T
2528674
aaaggctattttcgaatttttaggggacctaaagagatatt-agggggcctaaaaagcaata
2528734
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 42020446 - 42020403
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatat
140
Q
|||||||| ||||||| |||||||||||||||||||| ||||||
T
42020446
ttataaagattattttcgtatttttagggggcctaaatagatat
42020403
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 42020994 - 42021060
Alignment:
Q
97
ttataaaggttattttt-gtatttttagggg-gcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||| ||||||||| | | ||||||| ||||||||| |||| ||||||||||||
T
42020994
ttataaaggttatttttcgtatttttaagagagcctaaagagatattgaaggggtctaaaaagcaat
42021060
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 2528601 - 2528650
Alignment:
Q
42
tatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccgg
91
Q
||||||||| | |||||||| |||| |||||||||||||||||| |||||
T
2528601
tatgtacatccggaaggttttaaatgtgaaaatttaaaatgcaccaccgg
2528650
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 14090778 - 14090723
Alignment:
Q
105
gttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||| |||||||| ||||||||||| |||||||| || | |||||||||||||
T
14090778
gttattttcgtattttttgggggcctaaatagatattg-ggagacctaaaaagcaat
14090723
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 33255881 - 33255723
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||
T
33255881
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataa
33255782
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
33255781
aggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaat
33255723
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 47942171 - 47942009
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcac--------------taccgggtgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||| ||||||
T
47942171
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcacatccggtatgtaactaccggatgtattataa
47942072
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
47942071
aggttatttttgtatttttagggggcctaaagagatattg-gggggcctaaaaagcaatcttca
47942009
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 47942595 - 47942757
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| | | |||||||
T
47942595
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatatattataaa
47942694
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
47942695
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatcttca
47942757
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 47948025 - 47948187
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| | | |||||||
T
47948025
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatatattataaa
47948124
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
47948125
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatcttca
47948187
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 33256313 - 33256469
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgc--------------actaccgggtgtgttataaa
103
Q
||||||||| ||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||| |||||||
T
33256313
gaaaatttgtaaatgtgcctctggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
33256412
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||
T
33256413
ggttatttttgtacttttagggggcctaaagagatattg-gggggcctaaaaagcaat
33256469
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 7331178 - 7331114
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
T
7331178
ttataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaat
7331114
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 7331862 - 7331925
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
T
7331862
tataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaat
7331925
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 31724173 - 31724237
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
T
31724173
ttataaagattatttttgtatttttaaggggcctaaatagatattgagggggcctaaaaagcaat
31724237
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 34151675 - 34151600
Alignment:
Q
86
taccgggtgtgttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||| ||| |||| |||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||
T
34151675
taccggatgtattattaagggcatttttgtatctttagggggcctaaagagatattgagggggcctaaaaagcaat
34151600
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 34175449 - 34175524
Alignment:
Q
86
taccgggtgtgttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||| ||| |||| |||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||
T
34175449
taccggatgtattattaagggcatttttgtatctttagggggcctaaagagatattgagggggcctaaaaagcaat
34175524
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 48843245 - 48843180
Alignment:
Q
97
ttataaaggttattttt-gtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||| |||||||||||||||||||| |||||||||||| | ||| ||||||||
T
48843245
ttataaaggttatttttcgtatttttagggggcctaaagagatattgagggtggctataaagcaat
48843180
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 22377356 - 22377412
Alignment:
Q
105
gttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||| |||||||||||||||||||||||| ||||| || |||||||||||||||||
T
22377356
gttaattttgtatttttagggggcctaaagagatactggaggggcctaaaaagcaat
22377412
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 7331774 - 7331841
Alignment:
Q
24
ttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccgg
91
Q
||||||| |||||| |||||||||||||||| |||| ||||| ||||| |||||||| ||||||||
T
7331774
ttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaaattaaaatgaactaccgg
7331841
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 16959595 - 16959657
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||| |||||||| ||||||||||| ||||||| ||||||| |||||| |||||||||||
T
16959595
ttataaaagttattttcatatttttagggagcctaaagagatatt--gggggcgtaaaaagcaat
16959657
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 34152618 - 34152683
Alignment:
Q
101
aaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||| || ||| ||| ||| ||||||||||| ||||||| | |||||||||||||||||| ||||
T
34152618
aaaggctaatttagtaatttcagggggcctaagaagatatggtgggggcctaaaaagcaatgttca
34152683
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 34174506 - 34174441
Alignment:
Q
101
aaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
||||| || ||| ||| ||| ||||||||||| ||||||| | |||||||||||||||||| ||||
T
34174506
aaaggctaatttagtaatttcagggggcctaagaagatatggtgggggcctaaaaagcaatgttca
34174441
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 14)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 1388991 - 1389153
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
1388991
gaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
1389090
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||
T
1389091
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaatcttca
1389153
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 22424626 - 22424783
Alignment:
Q
18
gaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccggg--------------tgtgttataaa
103
Q
||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||
T
22424626
gaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataaa
22424725
T
Q
104
ggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
22424726
ggttatttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaat
22424783
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 22424194 - 22424031
Alignment:
Q
17
tgaaaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcacta--------------ccgggtgtgttataa
102
Q
|||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||| ||||||
T
22424194
tgaaaatttgtaaatgtgcctccggtatgtacataccgaaggtgtaaaatatgaaaatttaaaatgcactaccggtatgtaactaccggatgtattataa
22424095
T
Q
103
aggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattca
166
Q
|||||||||||||||||||| |||||||||| |||||||| ||| |||||||||||||| ||||
T
22424094
aggttatttttgtatttttaaggggcctaaagagatattgggggagcctaaaaagcaatcttca
22424031
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 29982814 - 29982965
Alignment:
Q
24
ttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgc--------------actaccgggtgtgttataaaggttat
109
Q
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | | |||||||||||||
T
29982814
ttgaaaatgtgcctccggtatgtacataccgaaggtttaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatatattataaaggttat
29982913
T
Q
110
ttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
29982914
ttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaat
29982965
T
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[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 37645068 - 37645219
Alignment:
Q
24
ttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgc--------------actaccgggtgtgttataaaggttat
109
Q
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | | || ||||||||||
T
37645068
ttgaaaatgtgcctccggtatgtacataccgaaggtttaaaatgtgaaaatttaaaatgcactaccggtatgtaactaccggatatattctaaaggttat
37645167
T
Q
110
ttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||| |||||||| ||||||||||||||||||
T
37645168
ttttgtatttttagggggcctaaagagatattgggggggcctaaaaagcaat
37645219
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 37644472 - 37644408
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
T
37644472
ttataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaat
37644408
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 21647666 - 21647603
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
T
21647666
tataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaat
21647603
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 29982218 - 29982154
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
T
29982218
ttataaaggttatttttgtatttttagggggcctaaagagatattgagagggcctaaaaagcaat
29982154
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 21648351 - 21648414
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
T
21648351
tataaaggttatttttgtatttttagggggtctaaagagatattgagggggcctaaaaagcaat
21648414
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 15321879 - 15321815
Alignment:
Q
98
tataaaggttatttttgt-atttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||
T
15321879
tataaaggttatttttgttatttttagggggcctaaagagatattgagggggcttaaaaagcaat
15321815
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 15167822 - 15167875
Alignment:
Q
108
atttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
|||||||||| ||||||||||||||| |||||||||||||| ||||||||||||
T
15167822
atttttgtatctttagggggcctaaagagatattgagggggtctaaaaagcaat
15167875
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 25217010 - 25217069
Alignment:
Q
32
gtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccgg
91
Q
||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||| |||||
T
25217010
gtgcccccggtatgtacataccgaaggttcaaaatgtgaaattttaaaatgcaccaccgg
25217069
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 15322641 - 15322680
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaag
136
Q
|||||||||| |||||||||||||||||||||||||||||
T
15322641
ttataaaggtcatttttgtatttttagggggcctaaaaag
15322680
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 15322553 - 15322621
Alignment:
Q
23
tttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccgg
91
Q
|||||||| |||||| |||||||||||||||| |||| ||||| ||||| |||||||| ||||||||
T
15322553
tttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgagaaaagttaaaatgaactaccgg
15322621
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0181 (Bit Score: 59; Significance: 5e-25; HSPs: 3)
Name: scaffold0181
Description:
Target: scaffold0181; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 18060 - 18122
Alignment:
Q
98
tataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaa
160
Q
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
T
18060
tataaaggttatttttgtatttttagggggcctaaagagatattgagggggcctaaaaagcaa
18122
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0181; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 17376 - 17312
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||
T
17376
ttataaaggttatttttatatttttagggggcctaaagaaatattgagggggcctaaaaagcaat
17312
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0181; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 17972 - 18039
Alignment:
Q
24
ttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcactaccgg
91
Q
||||||| |||||| ||||||||||||||||||||| ||||| ||||| |||||||| ||||||||
T
17972
ttgaaaatgtgccttcggtatgtacataccgaaggtgcaaaatgagaaaaattaaaatgaactaccgg
18039
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0178 (Bit Score: 37; Significance: 0.000000000007; HSPs: 3)
Name: scaffold0178
Description:
Target: scaffold0178; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 5144 - 5208
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaat
161
Q
||||||||| |||||| |||||||| ||| |||||| ||||||||| |||||||||||||||||
T
5144
ttataaaggatattttcctatttttatgggtcctaaagagatattgatggggcctaaaaagcaat
5208
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0178; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 5030 - 5097
Alignment:
Q
20
aaatttgaaaacgtgcctccggtatgtacataccgaaggtttaaaatatgaaaatttaaaatgcacta
87
Q
||||||||||| |||||| |||||||||||||||| |||| ||||| |||||| |||||||| ||||
T
5030
aaatttgaaaatgtgccttcggtatgtacataccggaggtgcaaaatgtgaaaaattaaaatgaacta
5097
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0178; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 4816 - 4749
Alignment:
Q
97
ttataaaggttatttttgtatttttagggggcctaaaaagatattgagggggcctaaaaagcaatattc
165
Q
|||||||||||||||| ||||||| | | |||||||| ||||||| ||||| || |||||||||||||
T
4816
ttataaaggttattttcgtattttaaagaggcctaaagagatatt-tggggggcttaaaagcaatattc
4749
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
© Oklahoma State University
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