View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0272_low_40 (Length: 237)
Name: NF0272_low_40
Description: NF0272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0272_low_40 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 94 - 237
Target Start/End: Original strand, 49082860 - 49083003
Alignment:
| Q |
94 |
cctcctcaaaacataacatttccacagaataaactttatgttgctgcagaaaacaatgctgcaagcaatcattctagtggttccgtggcttccacacaca |
193 |
Q |
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| T |
49082860 |
cctcctcaaaatataacatttccacagaataaacttgatgttgctgcagaaaacaatgctgcaagcaatcattctagtggttctgtggcttccacacaca |
49082959 |
T |
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| Q |
194 |
aaaatattgaatgcagtgnnnnnnntagtgagcctcatgtaagt |
237 |
Q |
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|||||||||||||||||| ||||||||||||||||||| |
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| T |
49082960 |
aaaatattgaatgcagtgaaaaaaatagtgagcctcatgtaagt |
49083003 |
T |
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