View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0274_high_6 (Length: 277)

Name: NF0274_high_6
Description: NF0274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0274_high_6
NF0274_high_6
[»] chr1 (6 HSPs)
chr1 (29-269)||(10572368-10572608)
chr1 (67-102)||(34712324-34712359)
chr1 (67-102)||(48415667-48415702)
chr1 (66-108)||(22947812-22947854)
chr1 (62-102)||(10577676-10577716)
chr1 (62-102)||(36878544-36878584)
[»] chr3 (4 HSPs)
chr3 (39-102)||(4990913-4990976)
chr3 (69-99)||(11666040-11666070)
chr3 (67-101)||(24204983-24205017)
chr3 (67-103)||(1389921-1389957)
[»] chr7 (4 HSPs)
chr7 (67-102)||(7438800-7438835)
chr7 (67-102)||(9778588-9778623)
chr7 (67-100)||(8842282-8842315)
chr7 (62-102)||(35862029-35862069)
[»] chr8 (8 HSPs)
chr8 (68-102)||(13397635-13397669)
chr8 (68-102)||(3658237-3658271)
chr8 (68-102)||(13403190-13403224)
chr8 (67-101)||(44067610-44067644)
chr8 (69-102)||(6065587-6065620)
chr8 (67-108)||(29447034-29447075)
chr8 (57-102)||(34127173-34127218)
chr8 (62-102)||(34450962-34451002)
[»] chr4 (1 HSPs)
chr4 (67-108)||(2625954-2625995)
[»] chr6 (5 HSPs)
chr6 (66-102)||(10649370-10649406)
chr6 (33-101)||(28862166-28862234)
chr6 (67-103)||(31385013-31385049)
chr6 (62-107)||(18367925-18367970)
chr6 (71-103)||(1700423-1700455)
[»] chr5 (3 HSPs)
chr5 (67-102)||(24906253-24906288)
chr5 (66-102)||(22423765-22423801)
chr5 (53-101)||(41995533-41995581)
[»] chr2 (6 HSPs)
chr2 (67-102)||(18255945-18255980)
chr2 (67-102)||(34993923-34993958)
chr2 (69-107)||(34006926-34006964)
chr2 (62-102)||(24009373-24009413)
chr2 (67-107)||(37419837-37419877)
chr2 (67-103)||(44860414-44860450)
[»] scaffold0007 (1 HSPs)
scaffold0007 (67-101)||(225199-225233)
[»] scaffold0450 (1 HSPs)
scaffold0450 (69-102)||(8565-8598)
[»] scaffold0004 (1 HSPs)
scaffold0004 (66-102)||(92904-92940)


Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 29 - 269
Target Start/End: Complemental strand, 10572608 - 10572368
Alignment:
Q  29 aattatatgcgtcggtgttgtgttggtgtcaggcacgtggacacgcctaattcaaggagtgtccgtgcttcataagttgatgatattatatctacttcta 128  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572608 aattaaatgtgtcggtgttgtgttggtgtcaggcacgtggacacgcctaattcaaggagtgtccgtgcttcataagttgatgatattatatctacttcta 10572509  T
Q  129 catgcataacaaacatggttgagattccttattctaccctttaagtgagagattacccactttattggttttaaattctgttattttactttcgtttgag 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10572508 catgcataacaaacatggttgagattccttattctaccctttaagtgagagatcacccactttattggttttaaattctgttattttactttcgtttgag 10572409  T
Q  229 ttagccataaaatttgctaatgcaggatgatacttcatctc 269  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10572408 ttagccataaaatttgctaatgcaggatgatacttcatctc 10572368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 34712359 - 34712324
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    ||||||| ||||||||||||||||||||||||||||    
T  34712359 ggacacgtctaattcaaggagtgtccgtgcttcata 34712324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 48415702 - 48415667
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    ||||||||||||| ||||||||||||||||||||||    
T  48415702 ggacacgcctaatccaaggagtgtccgtgcttcata 48415667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 22947812 - 22947854
Alignment:
Q  66 tggacacgcctaattcaaggagtgtccgtgcttcataagttga 108  Q
    |||||||||||||| | |||||||||||||||||||| |||||    
T  22947812 tggacacgcctaatccgaggagtgtccgtgcttcataggttga 22947854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 10577716 - 10577676
Alignment:
Q  62 cacgtggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  10577716 cacggggacacgccttatccaaggagtgtccgtgcttcata 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 36878544 - 36878584
Alignment:
Q  62 cacgtggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    |||| ||||||||||||| | ||||||||||||||||||||    
T  36878544 cacggggacacgcctaatcccaggagtgtccgtgcttcata 36878584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 4990976 - 4990913
Alignment:
Q  39 gtcggtgttgtgttggtgtcaggcacgtggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    ||||| || |||||||| |||| |||||||||||||||||| | ||||||||||||||||||||    
T  4990976 gtcggcgtcgtgttggtatcagacacgtggacacgcctaatccgaggagtgtccgtgcttcata 4990913  T

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Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 99
Target Start/End: Original strand, 11666040 - 11666070
Alignment:
Q  69 acacgcctaattcaaggagtgtccgtgcttc 99  Q
    |||||||||||||||||||||||||||||||    
T  11666040 acacgcctaattcaaggagtgtccgtgcttc 11666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 24205017 - 24204983
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcat 101  Q
    ||||||||||||||| |||||||||||||||||||    
T  24205017 ggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 1389921 - 1389957
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcataa 103  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  1389921 ggacatgcctaatccaaggagtgtccgtgcttcataa 1389957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 102
Target Start/End: Original strand, 7438800 - 7438835
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    ||||||||||||||||||||||||||||||||||||    
T  7438800 ggacacgcctaattcaaggagtgtccgtgcttcata 7438835  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 102
Target Start/End: Original strand, 9778588 - 9778623
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    ||||||||||||| ||||||||||||||||||||||    
T  9778588 ggacacgcctaatccaaggagtgtccgtgcttcata 9778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 8842315 - 8842282
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttca 100  Q
    ||||||||||||| ||||||||||||||||||||    
T  8842315 ggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 35862029 - 35862069
Alignment:
Q  62 cacgtggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    |||| ||||||||||||| | ||||||||||||||||||||    
T  35862029 cacgaggacacgcctaatccgaggagtgtccgtgcttcata 35862069  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 13397635 - 13397669
Alignment:
Q  68 gacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    |||||||||||||||||||||||||||||||||||    
T  13397635 gacacgcctaattcaaggagtgtccgtgcttcata 13397669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 3658237 - 3658271
Alignment:
Q  68 gacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    |||||||||||||| ||||||||||||||||||||    
T  3658237 gacacgcctaattcgaggagtgtccgtgcttcata 3658271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 13403190 - 13403224
Alignment:
Q  68 gacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    ||||||| |||||||||||||||||||||||||||    
T  13403190 gacacgcttaattcaaggagtgtccgtgcttcata 13403224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 44067610 - 44067644
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcat 101  Q
    ||||||||||||||| |||||||||||||||||||    
T  44067610 ggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 102
Target Start/End: Complemental strand, 6065620 - 6065587
Alignment:
Q  69 acacgcctaattcaaggagtgtccgtgcttcata 102  Q
    |||||| |||||||||||||||||||||||||||    
T  6065620 acacgcataattcaaggagtgtccgtgcttcata 6065587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 29447075 - 29447034
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcataagttga 108  Q
    ||||||||||||| | ||||||||||||||||||||| ||||    
T  29447075 ggacacgcctaatcctaggagtgtccgtgcttcataatttga 29447034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 34127218 - 34127173
Alignment:
Q  57 tcaggcacgtggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    |||| ||| ||||||| |||||| ||||||||||||||||||||||    
T  34127218 tcagacacctggacacacctaatccaaggagtgtccgtgcttcata 34127173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 34451002 - 34450962
Alignment:
Q  62 cacgtggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  34451002 cacggggacacgccttatccaaggagtgtccgtgcttcata 34450962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 2625995 - 2625954
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcataagttga 108  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  2625995 ggacacgcctaattcaaggagtatccgtgcttcataggttga 2625954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 10649370 - 10649406
Alignment:
Q  66 tggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    |||||||||||||| ||||||||||||||||||||||    
T  10649370 tggacacgcctaatccaaggagtgtccgtgcttcata 10649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 28862166 - 28862234
Alignment:
Q  33 atatgcgtcggtgttgtgttggtgtcaggcacgtggacacgcctaattcaaggagtgtccgtgcttcat 101  Q
    ||||| |||||||| ||||||||||| | |||  |||||| |||||||| ||| |||||||||||||||    
T  28862166 atatgtgtcggtgtcgtgttggtgtctgacactgggacacacctaattcgaggcgtgtccgtgcttcat 28862234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 31385013 - 31385049
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcataa 103  Q
    ||||||||||||| |||||||||||||||||||||||    
T  31385013 ggacacgcctaatccaaggagtgtccgtgcttcataa 31385049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 18367925 - 18367970
Alignment:
Q  62 cacgtggacacgcctaattcaaggagtgtccgtgcttcataagttg 107  Q
    |||| |||||||||| || |||||||||||||||||||||| ||||    
T  18367925 cacggggacacgccttatccaaggagtgtccgtgcttcataggttg 18367970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 1700423 - 1700455
Alignment:
Q  71 acgcctaattcaaggagtgtccgtgcttcataa 103  Q
    ||||||||||||||||||||||||| |||||||    
T  1700423 acgcctaattcaaggagtgtccgtgtttcataa 1700455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000006; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 24906288 - 24906253
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    ||||||||||||||| ||||||||||||||||||||    
T  24906288 ggacacgcctaattcgaggagtgtccgtgcttcata 24906253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 22423801 - 22423765
Alignment:
Q  66 tggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    |||||||||||||| | ||||||||||||||||||||    
T  22423801 tggacacgcctaatccgaggagtgtccgtgcttcata 22423765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 41995533 - 41995581
Alignment:
Q  53 ggtgtcaggcacgtggacacgcctaattcaaggagtgtccgtgcttcat 101  Q
    |||||| | |||| ||||||||||||| | |||||||||||||||||||    
T  41995533 ggtgtcggacacgaggacacgcctaatcctaggagtgtccgtgcttcat 41995581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000006; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 18255980 - 18255945
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    ||||||||||||| ||||||||||||||||||||||    
T  18255980 ggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 34993958 - 34993923
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    |||||||||||||||||||||||| |||||||||||    
T  34993958 ggacacgcctaattcaaggagtgttcgtgcttcata 34993923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 107
Target Start/End: Complemental strand, 34006964 - 34006926
Alignment:
Q  69 acacgcctaattcaaggagtgtccgtgcttcataagttg 107  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  34006964 acacacctaattcaaggagtgtccgtgcttcataggttg 34006926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 24009373 - 24009413
Alignment:
Q  62 cacgtggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  24009373 cacggggacacgccttatccaaggagtgtccgtgcttcata 24009413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 37419837 - 37419877
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcataagttg 107  Q
    ||||||||||||| | |||||||||||||||||||| ||||    
T  37419837 ggacacgcctaatccgaggagtgtccgtgcttcataggttg 37419877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 44860414 - 44860450
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcataa 103  Q
    |||||| |||||||| |||||||||||||||||||||    
T  44860414 ggacacacctaattcgaggagtgtccgtgcttcataa 44860450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 225233 - 225199
Alignment:
Q  67 ggacacgcctaattcaaggagtgtccgtgcttcat 101  Q
    ||||||||||||||| |||||||||||||||||||    
T  225233 ggacacgcctaattcgaggagtgtccgtgcttcat 225199  T

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Target: scaffold0450 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 102
Target Start/End: Complemental strand, 8598 - 8565
Alignment:
Q  69 acacgcctaattcaaggagtgtccgtgcttcata 102  Q
    ||||||||||||| ||||||||||||||||||||    
T  8598 acacgcctaattcgaggagtgtccgtgcttcata 8565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 92904 - 92940
Alignment:
Q  66 tggacacgcctaattcaaggagtgtccgtgcttcata 102  Q
    |||||||||||||| | ||||||||||||||||||||    
T  92904 tggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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