View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0274_low_9 (Length: 242)
Name: NF0274_low_9
Description: NF0274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0274_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 37580279 - 37580117
Alignment:
| Q |
47 |
aaaacatcacaatcctcatatttattttgggacaaactatgatgctgtgttcattgaatgtgtaaatgggtgaagttcctttgtttgacacgcattttgt |
146 |
Q |
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| T |
37580279 |
aaaacatcacaatcctcatatttattttgggacaaactatgatgccgtgttcattgaatgtgtaaatgggtgaagttcctttgtttgacacgcattttgt |
37580180 |
T |
|
| Q |
147 |
cgcatactgggtttggacccaacttaatgtgacctctcattgcttaagtgtaccgtcattcat |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37580179 |
cgcatactgggtttggacccaacttaatgtgacctctcattgcttaagtgtaccgtcattcat |
37580117 |
T |
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