View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0275_high_1 (Length: 519)

Name: NF0275_high_1
Description: NF0275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0275_high_1
NF0275_high_1
[»] chr2 (40 HSPs)
chr2 (60-336)||(14008039-14008318)
chr2 (172-336)||(8990785-8990952)
chr2 (168-332)||(25955652-25955819)
chr2 (171-336)||(10165505-10165673)
chr2 (168-336)||(36567096-36567267)
chr2 (172-336)||(38293980-38294147)
chr2 (167-328)||(31550078-31550243)
chr2 (170-331)||(31899176-31899340)
chr2 (170-336)||(4042056-4042225)
chr2 (191-336)||(8410770-8410919)
chr2 (168-336)||(13765754-13765928)
chr2 (168-336)||(40357549-40357720)
chr2 (193-329)||(7184220-7184358)
chr2 (168-336)||(18826049-18826215)
chr2 (171-336)||(19382969-19383138)
chr2 (191-337)||(38023288-38023437)
chr2 (171-331)||(18018420-18018582)
chr2 (169-336)||(3038765-3038936)
chr2 (166-336)||(44020431-44020600)
chr2 (217-331)||(32243572-32243690)
chr2 (186-330)||(726046-726193)
chr2 (171-331)||(8555597-8555760)
chr2 (219-336)||(18780476-18780596)
chr2 (166-330)||(12963790-12963954)
chr2 (166-299)||(1726032-1726161)
chr2 (168-299)||(30312244-30312376)
chr2 (217-328)||(14363376-14363493)
chr2 (222-283)||(43334909-43334970)
chr2 (217-276)||(3119350-3119409)
chr2 (217-278)||(18562041-18562102)
chr2 (197-268)||(28009704-28009775)
chr2 (248-336)||(30523369-30523460)
chr2 (187-336)||(11950090-11950239)
chr2 (286-336)||(3119788-3119841)
chr2 (221-331)||(29880861-29880974)
chr2 (298-336)||(39913365-39913403)
chr2 (231-327)||(36030894-36030993)
chr2 (248-331)||(4666232-4666318)
chr2 (284-331)||(36574382-36574432)
chr2 (298-330)||(44137233-44137265)
[»] scaffold0028 (1 HSPs)
scaffold0028 (168-336)||(35273-35444)
[»] chr3 (45 HSPs)
chr3 (168-336)||(47789264-47789435)
chr3 (166-328)||(30121338-30121503)
chr3 (166-336)||(49860928-49861101)
chr3 (166-336)||(41961793-41961966)
chr3 (168-336)||(43237382-43237553)
chr3 (166-329)||(3042944-3043110)
chr3 (166-336)||(36796516-36796690)
chr3 (166-336)||(44411970-44412144)
chr3 (165-331)||(30131701-30131870)
chr3 (170-328)||(47434114-47434275)
chr3 (166-336)||(47714486-47714662)
chr3 (166-328)||(38515337-38515502)
chr3 (203-336)||(33982592-33982728)
chr3 (172-331)||(49682824-49682986)
chr3 (197-336)||(2420751-2420893)
chr3 (217-336)||(23163615-23163737)
chr3 (213-336)||(38526245-38526371)
chr3 (166-336)||(43007344-43007511)
chr3 (168-336)||(55439676-55439848)
chr3 (176-336)||(34306690-34306852)
chr3 (168-336)||(39499290-39499461)
chr3 (166-331)||(45555727-45555905)
chr3 (217-336)||(25428760-25428882)
chr3 (166-336)||(17642681-17642854)
chr3 (166-336)||(46017297-46017470)
chr3 (169-317)||(55445018-55445171)
chr3 (187-336)||(7661128-7661282)
chr3 (197-299)||(27055760-27055862)
chr3 (236-331)||(42583183-42583283)
chr3 (197-336)||(38593044-38593189)
chr3 (229-329)||(46312298-46312402)
chr3 (246-329)||(31178143-31178229)
chr3 (201-336)||(15499150-15499288)
chr3 (248-336)||(46891478-46891569)
chr3 (222-333)||(4247212-4247326)
chr3 (271-336)||(32858922-32858990)
chr3 (168-336)||(52620653-52620824)
chr3 (248-331)||(27681900-27681985)
chr3 (271-333)||(13638521-13638586)
chr3 (242-336)||(11500193-11500292)
chr3 (298-331)||(23420753-23420786)
chr3 (248-336)||(40674199-40674290)
chr3 (270-333)||(7302179-7302245)
chr3 (253-336)||(31651348-31651434)
chr3 (166-206)||(47789617-47789657)
[»] chr6 (14 HSPs)
chr6 (166-336)||(5825424-5825597)
chr6 (168-330)||(29241651-29241816)
chr6 (166-336)||(24734972-24735147)
chr6 (165-336)||(26574210-26574384)
chr6 (168-336)||(23094947-23095117)
chr6 (176-336)||(34914719-34914882)
chr6 (172-331)||(26480953-26481115)
chr6 (166-336)||(31345185-31345360)
chr6 (186-336)||(1029385-1029537)
chr6 (166-311)||(4909696-4909845)
chr6 (254-336)||(33212412-33212497)
chr6 (253-334)||(16329473-16329557)
chr6 (298-336)||(33939074-33939112)
chr6 (172-228)||(34556995-34557051)
[»] chr1 (55 HSPs)
chr1 (166-336)||(32300147-32300320)
chr1 (168-336)||(33991633-33991805)
chr1 (166-336)||(32299194-32299368)
chr1 (167-336)||(11017693-11017865)
chr1 (168-336)||(23871281-23871452)
chr1 (166-329)||(1688033-1688199)
chr1 (166-336)||(13061212-13061386)
chr1 (169-336)||(13255436-13255605)
chr1 (166-336)||(27500076-27500249)
chr1 (167-336)||(38795063-38795229)
chr1 (168-331)||(15463907-15464074)
chr1 (166-336)||(2925753-2925924)
chr1 (168-336)||(43571787-43571954)
chr1 (168-336)||(896315-896484)
chr1 (168-336)||(42161872-42162042)
chr1 (168-329)||(50247695-50247859)
chr1 (168-336)||(1523687-1523858)
chr1 (217-336)||(42488493-42488616)
chr1 (217-336)||(12293904-12294026)
chr1 (170-336)||(47905511-47905678)
chr1 (168-299)||(26940711-26940842)
chr1 (166-336)||(45565222-45565394)
chr1 (168-336)||(47206241-47206413)
chr1 (197-336)||(39889505-39889647)
chr1 (166-336)||(2175426-2175601)
chr1 (168-336)||(50402833-50403005)
chr1 (197-336)||(17675288-17675428)
chr1 (172-299)||(7401388-7401515)
chr1 (191-336)||(8156187-8156326)
chr1 (191-330)||(26756996-26757138)
chr1 (197-336)||(17688431-17688577)
chr1 (197-331)||(51246423-51246558)
chr1 (166-336)||(50476620-50476793)
chr1 (204-329)||(40707056-40707186)
chr1 (217-299)||(7965572-7965655)
chr1 (166-331)||(39508867-39509033)
chr1 (220-336)||(938117-938240)
chr1 (168-290)||(30538591-30538713)
chr1 (213-331)||(36668512-36668633)
chr1 (252-336)||(14153203-14153290)
chr1 (253-333)||(30543266-30543349)
chr1 (209-328)||(28773247-28773372)
chr1 (270-336)||(41432682-41432751)
chr1 (220-336)||(28748282-28748401)
chr1 (255-330)||(33579351-33579429)
chr1 (248-336)||(50162227-50162321)
chr1 (248-334)||(52073356-52073445)
chr1 (298-336)||(7964066-7964104)
chr1 (221-299)||(9173620-9173698)
chr1 (298-336)||(35619465-35619503)
chr1 (278-333)||(1063430-1063489)
chr1 (299-336)||(18786379-18786416)
chr1 (166-206)||(9595786-9595826)
chr1 (248-331)||(27102722-27102808)
chr1 (166-206)||(39179277-39179317)
[»] chr7 (34 HSPs)
chr7 (165-336)||(43188949-43189123)
chr7 (168-336)||(28437359-28437531)
chr7 (168-327)||(34651871-34652033)
chr7 (166-330)||(7666980-7667148)
chr7 (166-331)||(38235891-38236057)
chr7 (170-330)||(47275821-47275985)
chr7 (172-336)||(41002074-41002240)
chr7 (197-336)||(43665016-43665158)
chr7 (186-336)||(19644384-19644540)
chr7 (218-331)||(42620220-42620336)
chr7 (168-336)||(33113461-33113628)
chr7 (186-336)||(5967889-5968042)
chr7 (209-336)||(33810071-33810201)
chr7 (200-331)||(44720178-44720311)
chr7 (166-336)||(3658327-3658500)
chr7 (217-336)||(23620661-23620782)
chr7 (217-309)||(39410245-39410337)
chr7 (166-331)||(36747392-36747565)
chr7 (217-336)||(33406498-33406621)
chr7 (217-325)||(42220143-42220254)
chr7 (233-331)||(43778457-43778559)
chr7 (166-336)||(23465816-23465989)
chr7 (242-330)||(46449270-46449362)
chr7 (172-247)||(33406414-33406489)
chr7 (207-336)||(14676322-14676454)
chr7 (222-299)||(18789029-18789106)
chr7 (222-299)||(12863525-12863602)
chr7 (219-299)||(16568630-16568710)
chr7 (219-299)||(16596952-16597032)
chr7 (248-331)||(22556602-22556688)
chr7 (253-336)||(42266910-42266996)
chr7 (248-336)||(36845339-36845430)
chr7 (166-215)||(41471375-41471424)
chr7 (251-326)||(24923295-24923373)
[»] chr4 (43 HSPs)
chr4 (168-331)||(41844532-41844698)
chr4 (166-336)||(32648820-32648993)
chr4 (166-329)||(17622289-17622454)
chr4 (167-336)||(32060738-32060910)
chr4 (166-331)||(36151187-36151354)
chr4 (172-336)||(3126834-3127001)
chr4 (168-336)||(17873288-17873459)
chr4 (168-336)||(20534019-20534190)
chr4 (168-331)||(24291482-24291649)
chr4 (197-336)||(38317075-38317217)
chr4 (166-336)||(41363628-41363801)
chr4 (168-321)||(24280018-24280174)
chr4 (166-336)||(37756535-37756712)
chr4 (168-336)||(31530111-31530286)
chr4 (191-329)||(904296-904437)
chr4 (166-336)||(16535783-16535956)
chr4 (173-299)||(13270115-13270241)
chr4 (168-329)||(38366126-38366289)
chr4 (197-336)||(49404470-49404612)
chr4 (166-336)||(7182003-7182180)
chr4 (186-336)||(32948362-32948515)
chr4 (166-297)||(50642953-50643088)
chr4 (238-337)||(48830702-48830804)
chr4 (171-336)||(52594442-52594615)
chr4 (217-327)||(22558878-22558990)
chr4 (222-336)||(47669902-47670019)
chr4 (216-336)||(21730191-21730316)
chr4 (242-328)||(23708236-23708325)
chr4 (172-294)||(21295940-21296062)
chr4 (166-257)||(54806626-54806717)
chr4 (206-336)||(24662603-24662736)
chr4 (254-334)||(53013681-53013764)
chr4 (270-333)||(39421910-39421976)
chr4 (270-336)||(49936594-49936663)
chr4 (298-336)||(13270045-13270083)
chr4 (270-331)||(51431041-51431105)
chr4 (186-334)||(9021028-9021179)
chr4 (168-213)||(22845050-22845095)
chr4 (300-336)||(21296058-21296094)
chr4 (253-336)||(28880083-28880169)
chr4 (298-334)||(42759602-42759638)
chr4 (298-330)||(42954706-42954738)
chr4 (221-297)||(43929619-43929695)
[»] chr8 (29 HSPs)
chr8 (168-336)||(33230864-33231036)
chr8 (176-336)||(34272607-34272770)
chr8 (168-336)||(1941868-1942042)
chr8 (176-336)||(3404399-3404563)
chr8 (172-336)||(25033472-25033639)
chr8 (166-336)||(36102706-36102879)
chr8 (166-328)||(36906287-36906454)
chr8 (168-336)||(13864910-13865081)
chr8 (166-336)||(4734312-4734485)
chr8 (166-330)||(37659349-37659514)
chr8 (166-330)||(34148396-34148562)
chr8 (166-336)||(34349807-34349980)
chr8 (212-336)||(2474629-2474756)
chr8 (225-324)||(7289-7392)
chr8 (248-336)||(15108162-15108253)
chr8 (166-233)||(7778-7845)
chr8 (268-336)||(11961439-11961510)
chr8 (220-301)||(6839669-6839749)
chr8 (270-330)||(31297268-31297331)
chr8 (254-336)||(13537434-13537519)
chr8 (254-336)||(13626982-13627067)
chr8 (249-331)||(38404438-38404523)
chr8 (254-336)||(10878689-10878771)
chr8 (298-336)||(13406519-13406557)
chr8 (298-336)||(16424230-16424268)
chr8 (298-336)||(28517211-28517249)
chr8 (221-259)||(31297234-31297272)
chr8 (227-336)||(43732991-43733109)
chr8 (273-336)||(29612083-29612149)
[»] chr5 (24 HSPs)
chr5 (168-329)||(25598587-25598751)
chr5 (168-336)||(17092989-17093160)
chr5 (167-336)||(25027014-25027186)
chr5 (171-336)||(35701495-35701663)
chr5 (166-330)||(38302176-38302341)
chr5 (166-330)||(1658275-1658441)
chr5 (168-331)||(33718278-33718444)
chr5 (168-336)||(4648801-4648976)
chr5 (168-336)||(10295575-10295749)
chr5 (166-330)||(35868928-35869094)
chr5 (172-336)||(27479989-27480161)
chr5 (197-336)||(2021072-2021214)
chr5 (209-336)||(26149695-26149826)
chr5 (213-330)||(32760854-32760976)
chr5 (209-329)||(41638470-41638591)
chr5 (168-311)||(38120013-38120158)
chr5 (217-300)||(37508225-37508309)
chr5 (168-334)||(9684609-9684778)
chr5 (270-336)||(41695069-41695138)
chr5 (197-336)||(19389675-19389817)
chr5 (248-336)||(17668032-17668123)
chr5 (270-336)||(37508311-37508379)
chr5 (270-336)||(6044625-6044694)
chr5 (272-336)||(35704968-35705035)
[»] scaffold0636 (1 HSPs)
scaffold0636 (166-336)||(8483-8656)
[»] scaffold1562 (1 HSPs)
scaffold1562 (171-336)||(232-400)
[»] scaffold1158 (1 HSPs)
scaffold1158 (171-336)||(2193-2361)
[»] scaffold0952 (1 HSPs)
scaffold0952 (168-336)||(3487-3659)
[»] scaffold0717 (1 HSPs)
scaffold0717 (168-336)||(1670-1842)
[»] scaffold0059 (2 HSPs)
scaffold0059 (197-297)||(67901-68000)
scaffold0059 (197-297)||(76006-76105)
[»] scaffold0013 (1 HSPs)
scaffold0013 (197-297)||(107657-107756)
[»] scaffold0623 (1 HSPs)
scaffold0623 (197-275)||(604-682)
[»] scaffold0459 (1 HSPs)
scaffold0459 (197-275)||(10241-10319)
[»] scaffold0078 (1 HSPs)
scaffold0078 (219-299)||(4409-4489)
[»] scaffold1763 (1 HSPs)
scaffold1763 (298-336)||(555-593)
[»] scaffold0648 (1 HSPs)
scaffold0648 (248-331)||(7338-7424)


Alignment Details
Target: chr2 (Bit Score: 193; Significance: 1e-104; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 60 - 336
Target Start/End: Original strand, 14008039 - 14008318
Alignment:
Q  60 atgaaatacacaaatgattagcatttagaaaggagagttgataagatggaaggtagttaaatggctagagtcttgagacatatataggaagagatagnnn 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||| ||||       
T  14008039 atgaaatacacaaatgattagcatttagaaaggagagttgataagatggaaggtagttaaatggctagtgtccagagacatatataggaagacatagaaa 14008138  T
Q  160 nnnntataaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatatttttt 259  Q
        ||||||||||||||||||| | |||||||||| |||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  14008139 aaaatataaggctttgtttgggagtttggaggggaagggaggggatgactttggggggttcgaaatatatagaaaaatggacaaaaaattcatatttttt 14008238  T
Q  260 gaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||| ||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||| ||||    
T  14008239 gaaagaacagtcttttagagaatgataaactaatacttatgattaatatacttttgattttaagaatattataacaacat 14008318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 172 - 336
Target Start/End: Original strand, 8990785 - 8990952
Alignment:
Q  172 tttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtt 271  Q
    ||||||||||| | |||||||||| | |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8990785 tttgtttgggagtttggaggggaaggaaggggagggctttggggggttggaaatatatagaaaaatggacaaaatattcatattttttgaaagaacagtt 8990884  T
Q  272 ttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  8990885 ttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 8990952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 168 - 332
Target Start/End: Original strand, 25955652 - 25955819
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||||| |||||||| |||||| | ||||||||||||||||||||||||| ||||||||| | ||||| |||||||    
T  25955652 aggctttgtttgggagtttggaggggaaagaaggggagggctttggtgggttggaaatatatagaaaaatggacgaaaaattcacaatttttaaaagaac 25955751  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataact 332  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||||    
T  25955752 agttttttagataatgataaactaatacttatgattaatatacttttaattttaagaatattataact 25955819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 171 - 336
Target Start/End: Complemental strand, 10165673 - 10165505
Alignment:
Q  171 ctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagt 270  Q
    |||||||||| | | |||||||||| |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  10165673 ctttgtttggaagtttggaggggaagggagaggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttaaaagaacagt 10165574  T
Q  271 tttttagaaaatgataaactaatac---ttattaatatacttttgattttaagaatattataactacat 336  Q
    |||||||| ||||||||||||||||   | |||||||||||||| ||||||||||||||| ||| ||||    
T  10165573 tttttagagaatgataaactaatacgtatgattaatatacttttaattttaagaatattacaacaacat 10165505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 36567096 - 36567267
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||| || || | |||||||||| |||||||||| |||||||| |||| |||||||||||||||||||||||||||||| ||||||| |||||||    
T  36567096 aggctttgtctgtgagtttggaggggaagggaggggagggctttggggggttgaaaatatatagaaaaatggacaaaaaattcacatttttttaaagaac 36567195  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
      ||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  36567196 gattttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 36567267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 172 - 336
Target Start/End: Complemental strand, 38294147 - 38293980
Alignment:
Q  172 tttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtt 271  Q
    ||||||||||| | |||||||||| ||||||||||||||||| |  ||| ||||||||||||||||| | |||| ||||| |||||||||||||||||||    
T  38294147 tttgtttgggagtttggaggggaagggaggggaggactttggaggattgaaaatatatagaaaaatgaataaaagattcacattttttgaaagaacagtt 38294048  T
Q  272 ttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  38294047 ttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 38293980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 167 - 328
Target Start/End: Original strand, 31550078 - 31550243
Alignment:
Q  167 aaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggac-aaaaaattcatattttttgaaaga 265  Q
    |||||||||||||||| | |||||||||| ||||| ||||| |||| || ||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  31550078 aaggctttgtttgggaatttggaggggaagggaggagaggattttgaggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaaga 31550177  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattat 328  Q
    | ||||||||||| ||||||||||||||| ||   |||||||||||||| ||||||||||||||||    
T  31550178 atagttttttagagaatgataaactaatagttatgattaatatacttttaattttaagaatattat 31550243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 170 - 331
Target Start/End: Original strand, 31899176 - 31899340
Alignment:
Q  170 gctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacag 269  Q
    ||||||||||||| | |||||||||| |||| |||  ||||||||| |||||||||||||||||||||| |||||||||||| | |||||||||||||||    
T  31899176 gctttgtttgggagtttggaggggaagggagaggaaaactttggggggttggaaatatatagaaaaatgaacaaaaaattcacaatttttgaaagaacag 31899275  T
Q  270 ttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataac 331  Q
    ||||||||| | ||||||||||||| ||   |||||||||||||| |||||||||||||||||||    
T  31899276 ttttttagagactgataaactaatagttatgattaatatacttttaattttaagaatattataac 31899340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 170 - 336
Target Start/End: Complemental strand, 4042225 - 4042056
Alignment:
Q  170 gctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacag 269  Q
    |||||||||||||   ||||||||||  |||||||||  ||||||| |||| ||||||||||||||||||||||||| |||| ||||||| |||| ||||    
T  4042225 gctttgtttgggagcttggaggggaagagaggggagggttttggggggttgaaaatatatagaaaaatggacaaaaagttcacatttttttaaagtacag 4042126  T
Q  270 ttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  4042125 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 4042056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 191 - 336
Target Start/End: Original strand, 8410770 - 8410919
Alignment:
Q  191 gggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaaca-gttttttagaaaatgataaac 289  Q
    ||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||     
T  8410770 gggaagggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaggttttttagagaatgataaat 8410869  T
Q  290 taatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  8410870 taatacttatgattaatatacttttaattttaagaatattataacaacat 8410919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 13765754 - 13765928
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttgg---aaatatatagaaaaatggacaaaaaattcatattttttgaaag 264  Q
    ||||||||||||||| | |||||| |||||||||||||| |||||||| |  ||   ||||||||||||||||||| |||||| ||| |||||||||| |    
T  13765754 aggctttgtttgggagtttggaggagaaaggaggggagggctttggggggggggtgaaaatatatagaaaaatggataaaaaaatcacattttttgaagg 13765853  T
Q  265 aacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  13765854 aacagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 13765928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 40357720 - 40357549
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaa 266  Q
    ||||||||||||| | | |||||||||| |||||||||   ||||||| |||| |||||||||||||||||||||||||| |||| ||||||||||||||    
T  40357720 aggctttgtttggaagtttggaggggaagggaggggagagttttgggg-gttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaa 40357622  T
Q  267 cagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||| ||||||||||||||||||   ||||||||| |||| ||||||||||||||||||| ||||    
T  40357621 cagttttttagagaatgataaactaatacttatgattaatataattttaattttaagaatattataacaacat 40357549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 193 - 329
Target Start/End: Complemental strand, 7184358 - 7184220
Alignment:
Q  193 gaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaa 292  Q
    ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  7184358 gaaaggaggggaggactttagag-gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaa 7184260  T
Q  293 tactt---attaatatacttttgattttaagaatattata 329  Q
    |||||   |||||||||||||| ||||||| || ||||||    
T  7184259 tacttatgattaatatacttttaattttaaaaacattata 7184220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 18826049 - 18826215
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| ||||||     || | |||  |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18826049 aggctttgtttgggagtttggaggggaagggaggg-----ctctaggggattggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 18826143  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||| |||||| |||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  18826144 agttttttagagaatgatgaactaatacttatgattaatatacttttaattttaagaatattataacaacat 18826215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 171 - 336
Target Start/End: Complemental strand, 19383138 - 19382969
Alignment:
Q  171 ctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagt 270  Q
    |||||||||||| | ||||| |||| ||||| |||| |||||||| |||| |||||||||||||||||||||||||||||| ||||||| ||||||| |     
T  19383138 ctttgtttgggagtttggagaggaagggaggagagggctttggggggttgaaaatatatagaaaaatggacaaaaaattcacatttttttaaagaacgga 19383039  T
Q  271 tttttagaaaatgat-aaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||| |||||| ||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  19383038 tttttagagaatgataaaactaatacttatgattaatatacttttaattttaagaatattataacaacat 19382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 191 - 337
Target Start/End: Original strand, 38023288 - 38023437
Alignment:
Q  191 gggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaacagttttttagaaaatgataaac 289  Q
    ||||| ||||||||||  ||||||| |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  38023288 gggaagggaggggagggttttgggg-gttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacagttttttagagaatgataaac 38023386  T
Q  290 taatactt---attaatatacttttgattttaagaatattataactacatt 337  Q
    |||| |||   |||||||||||||| ||||||||||||||||||| |||||    
T  38023387 taattcttatgattaatatacttttaattttaagaatattataacaacatt 38023437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 171 - 331
Target Start/End: Original strand, 18018420 - 18018582
Alignment:
Q  171 ctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatatttt-ttgaaagaacag 269  Q
    |||||||||||| | |||||||||| ||| |||||| |||||||| |||| ||||||||||||||||||||||||| |||| ||||| |||||||||||     
T  18018420 ctttgtttgggagtttggaggggaagggatgggagggctttgggg-gttgaaaatatatagaaaaatggacaaaaa-ttcacatttttttgaaagaacaa 18018517  T
Q  270 ttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataac 331  Q
    ||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||| |||||||    
T  18018518 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaattttataac 18018582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 169 - 336
Target Start/End: Original strand, 3038765 - 3038936
Alignment:
Q  169 ggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaac 267  Q
    ||||||||||||||   || ||||||| | | || ||| |||||| |  ||| |||||||||||||||||||||||||| |||| |||||||||||||||    
T  3038765 ggctttgtttgggagcttgaaggggaaggaaaggaagggctttggcggtttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaac 3038864  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    | ||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  3038865 aattttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 3038936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 44020600 - 44020431
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||| ||| ||||||| | |||||||||| ||||| ||||  ||||||| |||| ||||||||||||||||||||  |||||||  |||||||||||||    
T  44020600 taaggttttctttgggagtttggaggggaagggaggagagggttttggggggttgaaaatatatagaaaaatggac--aaaattc--attttttgaaaga 44020505  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||| ||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  44020504 acaattttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 44020431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 32243690 - 32243572
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttg 312  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||   ||||||||||||||     
T  32243690 gttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatactttta 32243591  T
Q  313 attttaagaatattataac 331  Q
    |||||||||||||||||||    
T  32243590 attttaagaatattataac 32243572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 186 - 330
Target Start/End: Complemental strand, 726193 - 726046
Alignment:
Q  186 tggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgat 285  Q
    |||||||||| | | | |||| |||||||| |||||||||||||||||||||| ||||||||||||  |||| |||||||||| ||||||||| ||||||    
T  726193 tggaggggaaggaaagagagggctttggggtgttggaaatatatagaaaaatgaacaaaaaattcactttttctgaaagaacaattttttagagaatgat 726094  T
Q  286 aaactaatactt---attaatatacttttgattttaagaatattataa 330  Q
    ||||||||||||   |||||||||||||| ||||||| ||||||||||    
T  726093 aaactaatacttatgattaatatacttttaattttaaaaatattataa 726046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 171 - 331
Target Start/End: Original strand, 8555597 - 8555760
Alignment:
Q  171 ctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagt 270  Q
    |||||||||||| | ||||||| || ||| || |||   |||||| |||  |||||||||||||||||||||||||||||| ||||||||||||||||      
T  8555597 ctttgtttgggagtttggagggaaagggatggaagggtgttggggggttaaaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaac 8555696  T
Q  271 tttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataac 331  Q
    |||||||| ||||||||||||||| ||   |||||||||||||| |||||||||||||||||||    
T  8555697 tttttagagaatgataaactaatatttatgattaatatacttttaattttaagaatattataac 8555760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 18780596 - 18780476
Alignment:
Q  219 tggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgatt 315  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| || |||||||||||| ||   |||||||||||||| |||    
T  18780596 tggaaatatataaaaaaatggacaaaaaattcacattttttgaaagaacagttatttagagaacgataaactaatatttatgattaatatacttttaatt 18780497  T
Q  316 ttaagaatattataactacat 336  Q
    |||| ||||||||||| ||||    
T  18780496 ttaataatattataacaacat 18780476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 166 - 330
Target Start/End: Original strand, 12963790 - 12963954
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaa-atggacaaaaaattcatattttttgaaag 264  Q
    ||||||||||||||||| | |||| ||||| ||  | |||  |||||||||  ||||||||||||||||| |||||||||||||||| ||||| |||||     
T  12963790 taaggctttgtttgggagtttggatgggaaggggagagag--ctttgggga--tggaaatatatagaaaaaatggacaaaaaattcacattttctgaaat 12963885  T
Q  265 aacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataa 330  Q
    |||||||||||||||||||||||| || || ||   |||||||||||||| ||||||||||||||||||    
T  12963886 aacagttttttagaaaatgataaagtagtatttatgattaatatacttttaattttaagaatattataa 12963954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 166 - 299
Target Start/End: Complemental strand, 1726161 - 1726032
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaa-aaaattcatattttttgaaag 264  Q
    |||||||||||||| || | |||||| ||| |||||||||| ||| ||||  |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  1726161 taaggctttgtttgagagtttggaggagaagggaggggagggcttggggg--ttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaag 1726064  T
Q  265 aacagttttttagaaaatgataaactaatacttat 299  Q
    ||   ||||||||| ||||||||||||||| ||||    
T  1726063 aa---ttttttagagaatgataaactaatatttat 1726032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 299
Target Start/End: Original strand, 30312244 - 30312376
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggagga---ctttggggagttggaaatatatagaaaaatggacaaaa-aattcatattttttgaaa 263  Q
    |||||||||||| || | ||||||||||  |||||||||    |||||||| |||| |||||||||||||||| ||||||| |||||| |||||  ||||    
T  30312244 aggctttgtttgagagtttggaggggaagagaggggagggaggctttgggg-gttgaaaatatatagaaaaatagacaaaataattcacatttt--gaaa 30312340  T
Q  264 gaacagttttttagaaaatgataaactaatacttat 299  Q
    ||||||||||||||| ||||||||||||||||||||    
T  30312341 gaacagttttttagagaatgataaactaatacttat 30312376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 217 - 328
Target Start/End: Original strand, 14363376 - 14363493
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaa--ttcatattttttgaaagaacagttttttagaaaatgataaactaatactt----attaatatacttt 310  Q
    |||| ||||||||||| ||||||| ||||||  |||| | ||||| |||||||| ||||||||||||||||||||||||  ||    ||||||||| |||    
T  14363376 gttgaaaatatatagataaatggaaaaaaaactttcacactttttaaaagaacaattttttagaaaatgataaactaatgtttgttgattaatatatttt 14363475  T
Q  311 tgattttaagaatattat 328  Q
    | ||||||||||||||||    
T  14363476 taattttaagaatattat 14363493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 43334970 - 43334909
Alignment:
Q  222 aaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatg 283  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  43334970 aaatatattgaaaaatggacaaaaaattcacattttttgaaagaacagtttttaaaaaaatg 43334909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 3119350 - 3119409
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtttttta 276  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| | |||||||    
T  3119350 gttggaaatatataaaaaaatggacaaaaaattcacattttttgaaagaataatttttta 3119409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 18562102 - 18562041
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttaga 278  Q
    |||||||||||||||||||||||| |||| ||||| ||||||| ||| ||||||||||||||    
T  18562102 gttggaaatatatagaaaaatggataaaatattcacattttttaaaacaacagttttttaga 18562041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 268
Target Start/End: Original strand, 28009704 - 28009775
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaaca 268  Q
    |||||||| | |||||| | ||| |||||||||  |||||||||||||||||||| ||||||||||||||||    
T  28009704 ggaggggaaggctttggagggttagaaatatatcaaaaaatggacaaaaaattcacattttttgaaagaaca 28009775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 336
Target Start/End: Complemental strand, 30523460 - 30523369
Alignment:
Q  248 ttcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||| |||||||||||||  ||||||||| | ||||||||| ||||||||   ||||||||| |||| |||| |||||||||||| ||||||    
T  30523460 ttcacattttttgaaagagtagttttttaaagaatgataaattaatacttatgattaatatatttttaatttcaagaatattatacctacat 30523369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 187 - 336
Target Start/End: Complemental strand, 11950239 - 11950090
Alignment:
Q  187 ggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgata 286  Q
    ||||||||  ||| ||||||||||||| | ||||||||||||| || ||||  ||| ||  |||| ||||||| |||||| | ||||||||| |||||||    
T  11950239 ggaggggaggggaagggaggactttggagggttggaaatatat-gagaaattcacataa--ttcacatttttttaaagaata-ttttttagataatgata 11950144  T
Q  287 aactaatacttatt----aatatacttttgattttaagaatattataactacat 336  Q
    || ||||||||||     |||||| ||||  |||||||||||||||||| ||||    
T  11950143 aattaatacttatggttaaatatatttttatttttaagaatattataacaacat 11950090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 3119788 - 3119841
Alignment:
Q  286 aaactaatacttat---taatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||||   |||||||||||| ||||||||||||||||||| ||||    
T  3119788 aaactaatacttatgattaatatacttttaattttaagaatattataacaacat 3119841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 331
Target Start/End: Complemental strand, 29880974 - 29880861
Alignment:
Q  221 gaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgatttt 317  Q
    |||||||||||||||||||  |||   ||||   ||||||||||| || ||||||||| |||||||||| ||| |||   ||||||||| |||| |||||    
T  29880974 gaaatatatagaaaaatggtgaaatctttcactgtttttgaaagagcaattttttagagaatgataaacgaatgcttatgattaatatatttttaatttt 29880875  T
Q  318 aagaatattataac 331  Q
     | |||||||||||    
T  29880874 gataatattataac 29880861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 39913403 - 39913365
Alignment:
Q  298 attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  39913403 attaatatatttttaattttaagaatattataactacat 39913365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 327
Target Start/End: Complemental strand, 36030993 - 36030894
Alignment:
Q  231 gaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatatta 327  Q
    |||||||||| |||   |||| |||||| ||||||  | ||||||||| ||||||||| |||| |||||   ||||||| |||| |||||||||||||||    
T  36030993 gaaaaatggagaaatctttcacatttttggaaagagtatttttttagagaatgataaattaatgcttatgattaatatatttttaattttaagaatatta 36030894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 331
Target Start/End: Complemental strand, 4666318 - 4666232
Alignment:
Q  248 ttcatattttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataac 331  Q
    ||||||||||||||||||  | ||| ||||| | ||||||| |||| |||||   ||||||| |||  |||||||||||||||||||    
T  4666318 ttcatattttttgaaagagtattttattagagagtgataaattaatgcttatgattaatatattttaaattttaagaatattataac 4666232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 331
Target Start/End: Original strand, 36574382 - 36574432
Alignment:
Q  284 ataaactaatacttat---taatatacttttgattttaagaatattataac 331  Q
    ||||||||||||||||   ||||||| |||| |||||||||||||||||||    
T  36574382 ataaactaatacttatgattaatatatttttaattttaagaatattataac 36574432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 330
Target Start/End: Complemental strand, 44137265 - 44137233
Alignment:
Q  298 attaatatacttttgattttaagaatattataa 330  Q
    |||||||||||||| ||||||||||||||||||    
T  44137265 attaatatacttttaattttaagaatattataa 44137233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 35273 - 35444
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35273 aggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 35372  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  35373 agttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 35444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 2e-62; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 47789264 - 47789435
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  47789264 aggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcaaattttttgaaaaaac 47789363  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  47789364 agttttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 47789435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 166 - 328
Target Start/End: Original strand, 30121338 - 30121503
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||| | |||||||||  |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30121338 taaggctttgtttgggagtttggaggggaggggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 30121437  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattat 328  Q
     |||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  30121438 gcagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattat 30121503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 49861101 - 49860928
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||| | |||||||||| |||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  49861101 taaggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatgggcaaaaaattcacattttttgaaaga 49861002  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||| ||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  49861001 acaattttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 49860928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 41961793 - 41961966
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||| ||||| |  ||||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41961793 taaggctttgtatgggagttaggaggggaagggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 41961892  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  41961893 acagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 41961966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 43237553 - 43237382
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| ||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43237553 aggctttgtttgggagtttggaggggaagggaggagagggatttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 43237454  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
     |||||||||| ||||||||||||||||||   ||||||| |||||| ||||||||||||||||||| ||||    
T  43237453 ggttttttagagaatgataaactaatacttatgattaataaacttttaattttaagaatattataacaacat 43237382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 166 - 329
Target Start/End: Original strand, 3042944 - 3043110
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||| | ||||||||||  || |||||| |||||||| |||||||||||||| |||||||||||||||||||| |||||||| ||||    
T  3042944 taaggctttgtttgggagtttggaggggaagagatgggagggctttggggggttggaaatatataaaaaaatggacaaaaaattcacattttttggaaga 3043043  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattata 329  Q
    ||||||||||||| ||||||||||||||||||   |||||||||||||| |||||||||||||||||    
T  3043044 acagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattata 3043110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 36796690 - 36796516
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaa-aaaattcatattttttgaaag 264  Q
    ||||||||||||||||| | ||||||  || |||||||||| ||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||    
T  36796690 taaggctttgtttgggagtttggaggaaaagggaggggagggctttggggagttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaag 36796591  T
Q  265 aacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||| |||||| ||||||||||||||| ||   |||||||||||||| ||||||||||||||||||| ||||    
T  36796590 aacagttatttagagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacat 36796516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 44411970 - 44412144
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggac-aaaaaattcatattttttgaaag 264  Q
    ||||||||||||||||| | |||||||||| |||||||||| |||||||| ||||||||||||||||||||| ||| |||||||||| ||||||| ||||    
T  44411970 taaggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaattgacaaaaaaattcacatttttttaaag 44412069  T
Q  265 aacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||||| ||||||||| ||||||||   |||||||||||||| ||||||| ||||||||||| ||||    
T  44412070 aacagttttttagagaatgataaattaatacttacgattaatatacttttaattttaaaaatattataacaacat 44412144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 165 - 331
Target Start/End: Original strand, 30131701 - 30131870
Alignment:
Q  165 ataaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaag 264  Q
    |||||||||||||||||| | ||||||| ||  ||  ||||| |||||||| |||||||| |||||||||||||||||||||||| | ||||||||||||    
T  30131701 ataaggctttgtttgggagtttggagggaaagagaatggagggctttggggggttggaaaaatatagaaaaatggacaaaaaatttacattttttgaaag 30131800  T
Q  265 aacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataac 331  Q
    | |||||||||||| ||||||||||||||||||   |||||||||||||| |||||||||||||||||||    
T  30131801 agcagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 30131870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 170 - 328
Target Start/End: Original strand, 47434114 - 47434275
Alignment:
Q  170 gctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcata-ttttttgaaagaaca 268  Q
    ||||||||||||| | ||||||||||  |||||||||  ||||| | ||||||||||||||||||||||||||||||||||| | ||||||||||||||     
T  47434114 gctttgtttgggagtttggaggggaagagaggggagggttttggag-gttggaaatatatagaaaaatggacaaaaaattcacatttttttgaaagaacg 47434212  T
Q  269 gttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattat 328  Q
    |||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  47434213 gttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattat 47434275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 47714486 - 47714662
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaa---ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaa 262  Q
    ||||| ||||||||||| | ||||||||||    |||||||||| |||||||  |||| |||||||||||||||| ||||||||||||| ||||||||||    
T  47714486 taaggatttgtttgggagtttggaggggaagaagggaggggagggctttgggaggttgaaaatatatagaaaaatagacaaaaaattcacattttttgaa 47714585  T
Q  263 agaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||| ||||||||| |||||||| |||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  47714586 agaacatttttttagagaatgataagctaatacttatgattaatatacttttaattttaagaatattataacaacat 47714662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 166 - 328
Target Start/End: Complemental strand, 38515502 - 38515337
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||| | | |||||||||| ||||||||||  ||  ||| |||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  38515502 taaggctttgtttggaaatttggaggggaagggaggggagggtttcagggggttgaaaatatatagaaaaatgaacaaaaaattcatatttttttaaaga 38515403  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattat 328  Q
    ||| ||||||||| ||| ||||||||||||||   |||||||||||||| ||||||||||||||||    
T  38515402 acaattttttagagaataataaactaatacttatgattaatatacttttaattttaagaatattat 38515337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 203 - 336
Target Start/End: Original strand, 33982592 - 33982728
Alignment:
Q  203 gaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---at 299  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||   ||    
T  33982592 gaggattttggggggttggaaatatatagaaaaatggataaaaaattcacattttttgaaagaacagttttttagagaataataaactaatacttgtgat 33982691  T
Q  300 taatatacttttgattttaagaatattataactacat 336  Q
     ||||||||||| ||||||||||||||||||| ||||    
T  33982692 aaatatacttttaattttaagaatattataacaacat 33982728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 172 - 331
Target Start/End: Original strand, 49682824 - 49682986
Alignment:
Q  172 tttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtt 271  Q
    |||||||| || | |||||||||| |||||||||| |||||||| |||||||||||||||||||||| |||||||||||| ||||||||||| |||| ||    
T  49682824 tttgtttgtgagtttggaggggaagggaggggagggctttgggg-gttggaaatatatagaaaaatgaacaaaaaattcacattttttgaaaaaacattt 49682922  T
Q  272 ttttagaaaatgataaactaatactt---attaatatacttttga-ttttaagaatattataac 331  Q
    ||||||| ||||||||||||||||||   |||||||||||||| | |||||||||| |||||||    
T  49682923 ttttagataatgataaactaatacttatgattaatatacttttaatttttaagaatcttataac 49682986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 2420893 - 2420751
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatact 296  Q
    |||||||||| |||||||  ||||||||||||||||||||||||||||||||||| ||||||| ||| | | |||||||||| |||||||||||||||||    
T  2420893 ggaggggagggctttgggaggttggaaatatatagaaaaatggacaaaaaattcacattttttaaaacagcggttttttagagaatgataaactaatact 2420794  T
Q  297 t---attaatatacttttgattttaagaatattataactacat 336  Q
    |   |||||||||||||| ||||||||||||||||||| ||||    
T  2420793 tatgattaatatacttttaattttaagaatattataacaacat 2420751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 217 - 336
Target Start/End: Complemental strand, 23163737 - 23163615
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttga 313  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||   |||||||||||||| |    
T  23163737 gttggaaatatatagataaatagacaaaaaattcatattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatacttttaa 23163638  T
Q  314 ttttaagaatattataactacat 336  Q
    |||||||||||||||||| ||||    
T  23163637 ttttaagaatattataacaacat 23163615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 213 - 336
Target Start/End: Complemental strand, 38526371 - 38526245
Alignment:
Q  213 gggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatactt 309  Q
    |||||||||||||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||   ||||||||||||    
T  38526371 gggagttggaaatatataaaaaaatggataaaaaattcacattttttgaaaaaacagttttttagacaatgataaactaatacttatgattaatatactt 38526272  T
Q  310 ttgattttaagaatattataactacat 336  Q
    || ||||||||||||||||||| ||||    
T  38526271 ttaattttaagaatattataacaacat 38526245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 43007344 - 43007511
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    |||||||||||||| || | |||||||||| ||  ||||||  ||| |||  ||||||||||||||||||||||||||||||||  |||||||| |||||    
T  43007344 taaggctttgtttgagagtttggaggggaaggg--gggagggttttcggg--ttggaaatatatagaaaaatggacaaaaaatt--tatttttttaaaga 43007437  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  43007438 acagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 43007511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 55439848 - 55439676
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| |||||||||| ||  |||| |||| ||||| ||||||||||| ||||||||||||  ||||||||| ||||    
T  55439848 aggctttgtttgggagtttggaggggaagggaggggagggctccggggggttgaaaatacatagaaaaatgcacaaaaaattcaatttttttgaatgaac 55439749  T
Q  268 ag-ttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
     | ||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  55439748 ggtttttttagataatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 55439676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 176 - 336
Target Start/End: Complemental strand, 34306852 - 34306690
Alignment:
Q  176 tttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtttttt 275  Q
    ||||||| | |||||||||| |||| |||||  ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  34306852 tttgggagtatggaggggaagggagtggagggttttggggggttggaaatatatagaaaaattgacaaaaaattcagattttttgaaataacagtttttt 34306753  T
Q  276 agaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    | | ||||||||||||||| ||   |||||||||| ||| ||||||||||||||||||| ||||    
T  34306752 atagaatgataaactaatatttatgattaatatac-tttaattttaagaatattataacaacat 34306690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 39499461 - 39499290
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatgga-caaaaaattcatattttttgaaagaa 266  Q
    ||||||||||||||| | |||||||||| |||||||||| |||||||  |||| |||||||||||||||||||  |||||||||| ||||||| ||||||    
T  39499461 aggctttgtttgggagtttggaggggaagggaggggagggctttggg--gttgaaaatatatagaaaaatggataaaaaaattcacattttttaaaagaa 39499364  T
Q  267 cag-ttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||| ||||||| | ||| ||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  39499363 cagtttttttaaagaataataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 39499290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 166 - 331
Target Start/End: Complemental strand, 45555905 - 45555727
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaagga-----ggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttg 260  Q
    ||||||||||||||||| | |||||||||| |||     ||||||| |||||||| ||||||||||||  ||||||||||||||||||||| ||||||||    
T  45555905 taaggctttgtttgggagtttggaggggaatggaagggaggggagggctttggggggttggaaatata--gaaaaatggacaaaaaattcacattttttg 45555808  T
Q  261 aaagaacagttttttagaaaatgataaactaatactt----------attaatatacttttgattttaagaatattataac 331  Q
    |||||||| ||||||||| ||||||||||||||||||          |||||||||||||| |||||||||||||||||||    
T  45555807 aaagaacaattttttagagaatgataaactaatacttataagttatgattaatatacttttaattttaagaatattataac 45555727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 217 - 336
Target Start/End: Complemental strand, 25428882 - 25428760
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttga 313  Q
    |||| ||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||   |||||||||||||| |    
T  25428882 gttgaaaatatatagaaaaaaggataaaaaattcacattttttgaaagaacagttttttagagaatgataaaataatacttatgattaatatacttttaa 25428783  T
Q  314 ttttaagaatattataactacat 336  Q
    |||||||||||||||||| ||||    
T  25428782 ttttaagaatattataacaacat 25428760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 17642854 - 17642681
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    |||||||||||||| || | |||| | ||| |||||||||   ||| ||  ||||||||||||||||||||| || |||||||||| ||||||| |||||    
T  17642854 taaggctttgtttgagagtttggatgagaatggaggggagcgttttcggaggttggaaatatatagaaaaatagataaaaaattcacatttttttaaaga 17642755  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    | ||||||||||| ||||||||||||||| ||   |||||||||||||| ||||||||||||||||||| ||||    
T  17642754 atagttttttagagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacat 17642681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 46017470 - 46017297
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||| ||||||||||| | |||||  ||| ||||||||    ||| ||| ||||||||||||||||||||| || |||||||||| |||||||||||||    
T  46017470 taaggttttgtttgggagtttggagaagaagggaggggatagttttagggggttggaaatatatagaaaaatagataaaaaattcacattttttgaaaga 46017371  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||| ||||||||| ||||||||| ||| ||||   |||||||||||||| ||||||| ||||||||||| ||||    
T  46017370 acaattttttagagaatgataaaataaaacttatgattaatatacttttaattttaaaaatattataacaacat 46017297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 169 - 317
Target Start/End: Complemental strand, 55445171 - 55445018
Alignment:
Q  169 ggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggac-aaaaaattcatattttttgaaagaac 267  Q
    |||||||||||||| | |||||||||| |||||||||| || ||  | |||||||||||||||||||||| || |||||||||| |||||||||| ||||    
T  55445171 ggctttgtttgggagtttggaggggaagggaggggagggctctgatgggttggaaatatatagaaaaatgaacaaaaaaattcacattttttgaatgaac 55445072  T
Q  268 ag-ttttttagaaaatgataaactaatactt---attaatatacttttgatttt 317  Q
    || ||||||||| ||||||||||||||||||   |||||||||||||| |||||    
T  55445071 agtttttttagagaatgataaactaatacttatgattaatatacttttaatttt 55445018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 187 - 336
Target Start/End: Complemental strand, 7661282 - 7661128
Alignment:
Q  187 ggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatg--gacaaaaaattcatattttttgaaagaac-agttttttagaaaatg 283  Q
    ||||| ||| ||||| |||| |||||||| |||||||||||||| |||||    ||||||||||||| ||||||||||||||| | ||||||||| ||||    
T  7661282 ggaggagaagggaggagagggctttgggg-gttggaaatatataaaaaaaataagacaaaaaattcacattttttgaaagaacaatttttttagagaatg 7661184  T
Q  284 ataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||||   ||||| |||||||| ||||||||||||||||||| ||||    
T  7661183 ataaactaatacttatgattaacatacttttaattttaagaatattataacaacat 7661128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 299
Target Start/End: Original strand, 27055760 - 27055862
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacag-ttttttagaaaatgataaactaatac 295  Q
    |||||| |||||||||||| |||||||||||||| |||||||||||||||||  | ||||||||||| ||||| ||||||||| ||||||||||||||||    
T  27055760 ggagggaaggactttgggg-gttggaaatatataaaaaaatggacaaaaaatcaacattttttgaaaaaacagtttttttagagaatgataaactaatac 27055858  T
Q  296 ttat 299  Q
    ||||    
T  27055859 ttat 27055862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 236 - 331
Target Start/End: Original strand, 42583183 - 42583283
Alignment:
Q  236 atggacaaaaaattcatattttttgaaagaacag--ttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataa 330  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||   |||||||||||||| | ||||||||||||||||    
T  42583183 atggacaaaaaattcatattttttgaaagaacagttttttttagagaatgataaactagtacttatgattaatatacttttaactttaagaatattataa 42583282  T
Q  331 c 331  Q
    |    
T  42583283 c 42583283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 38593189 - 38593044
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatg----gacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaa 292  Q
    |||||| ||| |||||||| |||||| |||||||||||||||    || |||||||||| ||||||| ||||||| |||||||||| |||||||||||||    
T  38593189 ggagggaagggctttgggg-gttggatatatatagaaaaatgaagagaaaaaaaattcacatttttttaaagaacggttttttagagaatgataaactaa 38593091  T
Q  293 tactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||   |||||||| ||||| ||||||| | ||||||||| ||||    
T  38593090 tacttatgattaatatgcttttaattttaaaagtattataacaacat 38593044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 329
Target Start/End: Original strand, 46312298 - 46312402
Alignment:
Q  229 tagaaaaatggacaaaaaattcatatttt-ttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaata 324  Q
    |||||||||||| |||||||||| ||||| |||||||||||| |||||||| ||||||||||||||| ||   |||||||||||||| ||||||| ||||    
T  46312298 tagaaaaatggataaaaaattcacatttttttgaaagaacagatttttagagaatgataaactaatatttatgattaatatacttttaattttaaaaata 46312397  T
Q  325 ttata 329  Q
    |||||    
T  46312398 ttata 46312402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 246 - 329
Target Start/End: Original strand, 31178143 - 31178229
Alignment:
Q  246 aattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattata 329  Q
    |||||| ||||||| |||||||||||||||||  ||||||||||||||| ||   |||||||||||||| |||||||||||||||||    
T  31178143 aattcacattttttaaaagaacagttttttagtgaatgataaactaatagttatgattaatatacttttaattttaagaatattata 31178229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 336
Target Start/End: Original strand, 15499150 - 15499288
Alignment:
Q  201 gggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatacttat- 299  Q
    |||| ||||||||  |||||||||||||||||||||| |  |||   |||| ||||||||||| |  |  |||||||| ||||||||| ||||||||||     
T  15499150 gggaagactttggaaagttggaaatatatagaaaaatagtaaaatctttcacattttttgaaatagtaaatttttagagaatgataaaataatacttatg 15499249  T
Q  300 --taatatacttttgattttaagaatattataactacat 336  Q
      ||||||| |||  ||||||||||||||||||||||||    
T  15499250 attaatatattttaaattttaagaatattataactacat 15499288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 336
Target Start/End: Complemental strand, 46891569 - 46891478
Alignment:
Q  248 ttcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||||||||  | ||||||||| | ||||||| ||||||||   ||||||||| |||| ||||||||||||||||||| ||||    
T  46891569 ttcatattttttgaaagattatttttttagagactgataaattaatacttatgattaatatatttttaattttaagaatattataacaacat 46891478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 222 - 333
Target Start/End: Complemental strand, 4247326 - 4247212
Alignment:
Q  222 aaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgatttta 318  Q
    ||||||| ||||||||||  |||   |||||||||||| |||||  | ||||||||| ||||||||| |||| |||||   ||||||| |||| ||||||    
T  4247326 aaatatagagaaaaatggtaaaatctttcatatttttttaaagagtaattttttagagaatgataaattaatgcttatgattaatatatttttaatttta 4247227  T
Q  319 agaatattataacta 333  Q
    |||||||||||||||    
T  4247226 agaatattataacta 4247212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 32858990 - 32858922
Alignment:
Q  271 tttttagaaaatgataaactaatactta---ttaatatacttttgattttaagaatattataactacat 336  Q
    |||||||| ||||||||| |||||||||   |||||||| |||| ||||||||||||||||||||||||    
T  32858990 tttttagagaatgataaattaatacttacgattaatatatttttaattttaagaatattataactacat 32858922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 52620653 - 52620824
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||  |||||||||| |||||||||||  |||||||  ||||||||||| | |   ||||||||||||  ||||      
T  52620653 aggctttgtttgggagtttggaggggaggggaggggagggctttggggagtgtgaaatattgagaaaaatggagatatctttcatattttttcgaagagt 52620752  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |   ||||||  |||||||||  ||| |||   ||||||||| |||| ||||||| ||||||||||| ||||    
T  52620753 atagttttagcgaatgataaatcaatgcttatgattaatatattttttattttaaaaatattataacaacat 52620824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 331
Target Start/End: Complemental strand, 27681985 - 27681900
Alignment:
Q  248 ttcatattttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataac 331  Q
    |||||||||||||||| || | ||||||||| | ||||||| |||| |||||   ||||||| |||| |||||||||||||||||||    
T  27681985 ttcatattttttgaaaaaata-ttttttagagagtgataaattaatgcttatgattaatatatttttaattttaagaatattataac 27681900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 333
Target Start/End: Complemental strand, 13638586 - 13638521
Alignment:
Q  271 tttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataacta 333  Q
    |||||||| ||||||||| |||| |||||   ||||||| |||| |||||||||||||||||||||    
T  13638586 tttttagagaatgataaattaatgcttatgattaatatatttttaattttaagaatattataacta 13638521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 336
Target Start/End: Complemental strand, 11500292 - 11500193
Alignment:
Q  242 aaaaaattcatattttttgaaagaa-cagttttttagaaaatgataaactaatactt---attaatata-cttttgattttaagaatattataactacat 336  Q
    |||||| ||||||||||||||||||  | ||||||||| ||||||||| ||||  ||   |||||||||  |||| ||||||||||||||||||| ||||    
T  11500292 aaaaaaatcatattttttgaaagaatgatttttttagagaatgataaattaatgtttataattaatatattttttaattttaagaatattataacaacat 11500193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 331
Target Start/End: Original strand, 23420753 - 23420786
Alignment:
Q  298 attaatatacttttgattttaagaatattataac 331  Q
    |||||||||||||| |||||||||||||||||||    
T  23420753 attaatatacttttaattttaagaatattataac 23420786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 336
Target Start/End: Complemental strand, 40674290 - 40674199
Alignment:
Q  248 ttcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||| |||||||||||||  | |||||||||   |||||||  |||||||   ||||||||| |||| ||||||||||||||||||| ||||    
T  40674290 ttcacattttttgaaagagaatttttttagagtgtgataaatcaatacttgtgattaatatatttttaattttaagaatattataacaacat 40674199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 333
Target Start/End: Complemental strand, 7302245 - 7302179
Alignment:
Q  270 ttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataacta 333  Q
    ||||||||| |||||||||  |||||||||   ||||||| ||||  ||||||||||||||||||||    
T  7302245 ttttttagagaatgataaatcaatacttatgattaatatatttttagttttaagaatattataacta 7302179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 31651348 - 31651434
Alignment:
Q  253 attttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||||  | ||||||||| |||| |||| |||| |||||   ||||||| |||| ||||||||||||| ||| ||||||    
T  31651348 attttttgaaagagtaattttttagagaatgttaaattaatgcttatgattaatatatttttaattttaagaatatcatagctacat 31651434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 47789657 - 47789617
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggagg 206  Q
    ||||||||||||||||| | |||||||||| ||||||||||    
T  47789657 taaggctttgtttgggagtttggaggggaagggaggggagg 47789617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 4e-61; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 5825597 - 5825424
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||| | |||||||||| |||||| |||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||    
T  5825597 taaggctttgtttgggagtttggaggggaagggagggaaggactttggggggttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 5825498  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  5825497 acagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 5825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 168 - 330
Target Start/End: Original strand, 29241651 - 29241816
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| |||||||||| |||| ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  29241651 aggctttgtttgggagtttggaggggaagggaggggagggctttagggggttggaaatatgtagaaaaatggacaaaaaattcacattttttgaaagaac 29241750  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataa 330  Q
    || |||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||    
T  29241751 agatttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataa 29241816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 24735147 - 24734972
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa--ttcatattttttgaaa 263  Q
    ||||| ||||||||||| | |||||||||  ||||||||||  ||||||| |||||||||||||||||||||||||||||||  |||| |||||||||||    
T  24735147 taaggttttgtttgggagtttggaggggaggggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattttcacattttttgaaa 24735048  T
Q  264 gaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  24735047 gaacagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 24734972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 165 - 336
Target Start/End: Original strand, 26574210 - 26574384
Alignment:
Q  165 ataaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaag 264  Q
    |||||||||||||||||| | ||| |||||| ||||| |||  |||||||| ||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  26574210 ataaggctttgtttgggagtttggtggggaagggaggagagagctttggggggttggaaatatattgaaaaatagacaaaaaattcacattttttgaaag 26574309  T
Q  265 aacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||| ||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  26574310 aacaattttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 26574384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 23094947 - 23095117
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | ||||| |||| |||||||||| ||||||||  ||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  23094947 aggctttgtttgggagtttggagtggaagggaggggagg-ctttggggttttggaaatatatagaaaaatggacaaaaaattcactttttttgaaagaac 23095045  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    | ||||||||| ||||||||| ||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  23095046 aattttttagagaatgataaaataatacttatgattaatatacttttaattttaagaatattataacaacat 23095117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 176 - 336
Target Start/End: Complemental strand, 34914882 - 34914719
Alignment:
Q  176 tttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtttttt 275  Q
    ||||||| | |||||||||| ||||||||||  |||||||  ||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34914882 tttgggagtatggaggggaagggaggggagggttttgggggtttaaaaatatatagaaaaatggacaaaaaattcatattttttgaaaaaacagtttttt 34914783  T
Q  276 agaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  34914782 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 34914719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 172 - 331
Target Start/End: Original strand, 26480953 - 26481115
Alignment:
Q  172 tttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtt 271  Q
    ||||||||||| | |||| ||||| |||||||||| |||| ||| ||||||||||||||||||||| || |||||||||| ||||||||||| |||||||    
T  26480953 tttgtttgggagtttggaagggaagggaggggagggctttcgggggttggaaatatatagaaaaattgataaaaaattcacattttttgaaaaaacagtt 26481052  T
Q  272 ttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataac 331  Q
    ||||||| ||||||||||||||||||   |||||||||||||| |||||||||||||||||||    
T  26481053 ttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 26481115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 31345185 - 31345360
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||| | |||| ||||| ||||||||||  ||| ||| ||||||||||||||||||||||||||||||||| | |||||||||||||    
T  31345185 taaggctttgtttgggagtttggaagggaacggaggggagggttttagggggttggaaatatatagaaaaatggacaaaaaatttacattttttgaaaga 31345284  T
Q  266 acagttttttagaaaatgataaacta-atactt----attaatatacttttgattttaagaatattataactacat 336  Q
    ||  |||||||||||||||||||||| ||||||    |||||||||||||| ||||||||||||||||||| ||||    
T  31345285 accattttttagaaaatgataaactatatacttattgattaatatacttttaattttaagaatattataacaacat 31345360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 186 - 336
Target Start/End: Complemental strand, 1029537 - 1029385
Alignment:
Q  186 tggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgat 285  Q
    ||||||||||  ||||||||| |||||||| ||||||||||||||||||||| || |||||||||| ||||||| ||||||||  | |||||| ||||||    
T  1029537 tggaggggaatagaggggagggctttggggggttggaaatatatagaaaaatagataaaaaattcacatttttttaaagaaca-atatttagagaatgat 1029439  T
Q  286 aaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  1029438 aaactaatacttgtgattaatatacttttaattttaagaatattataacaacat 1029385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 166 - 311
Target Start/End: Original strand, 4909696 - 4909845
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggac-aaaaaattcatattttttgaaag 264  Q
    ||||||||||||||||| | |||||||||| ||||| |||| ||||||||  || |||||||||||||||||| || |||||||||| ||||||||||||    
T  4909696 taaggctttgtttgggagtttggaggggaagggaggcgagggctttgggggtttagaaatatatagaaaaatgaacaaaaaaattcacattttttgaaag 4909795  T
Q  265 aacagttttttagaaaatgataaactaatactt---attaatatactttt 311  Q
    |||| ||||||||| |||||||||||||| |||   ||||||||||||||    
T  4909796 aacaattttttagagaatgataaactaatgcttataattaatatactttt 4909845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 33212497 - 33212412
Alignment:
Q  254 ttttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||  | ||||||||| | ||||||||||||||||   ||| ||||| |||| ||||||||||||||||||| ||||    
T  33212497 ttttttgaaagattaattttttagatagtgataaactaatacttatgattcatatatttttaattttaagaatattataacaacat 33212412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 16329557 - 16329473
Alignment:
Q  253 attttttgaaagaacagttttttagaaaatgataaactaa---tacttattaatatacttttgattttaagaatattataactac 334  Q
    |||||||||||||| | ||||||||| ||||||||| |||   || | ||||| ||| |||| ||||||||||| ||||||||||    
T  16329557 attttttgaaagaataattttttagagaatgataaattaatgctaatgattaaaatatttttaattttaagaatgttataactac 16329473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 336
Target Start/End: Original strand, 33939074 - 33939112
Alignment:
Q  298 attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  33939074 attaatatatttttaattttaagaatattataactacat 33939112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 34556995 - 34557051
Alignment:
Q  172 tttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatata 228  Q
    ||||||||||||| |||||||||   || |||| |||||||| ||||||||||||||    
T  34556995 tttgtttgggattttggaggggaggagatgggaagactttggagagttggaaatata 34557051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 9e-59; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 32300320 - 32300147
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||| | |||||||||| |||||||||| |||||||  ||||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  32300320 taaggctttgtttgggagtttggaggggaagggaggggagggctttgggaggttggaaatatgtagaaaaatggacaaaaaattcacattttttaaaaga 32300221  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  32300220 acagttttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 32300147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 33991805 - 33991633
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaa-aaaattcatattttttgaaagaa 266  Q
    ||||||||||||||| | |||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  33991805 aggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaa 33991706  T
Q  267 cagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  33991705 cagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 33991633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 32299368 - 32299194
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggag-ttggaaatatatagaaaaatggacaaaaaattcatattttttgaaag 264  Q
    ||||||||||||||||| | |||||||||| |||||||||| |||| ||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  32299368 taaggctttgtttgggagtttggaggggaagggaggggagggcttttgggaggttggaaatatgtagaaaaatggacaaaaaattcacattttttaaaag 32299269  T
Q  265 aacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||| |||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  32299268 aactgttttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 32299194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 167 - 336
Target Start/End: Complemental strand, 11017865 - 11017693
Alignment:
Q  167 aaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaa 266  Q
    |||| ||||||||||| |  | ||||||||||||||||||  ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  11017865 aaggatttgtttgggaattcgtaggggaaaggaggggagggttttggggggttggaaatatatagaaaaatagacaaaaaattcacattttttgaaagaa 11017766  T
Q  267 cagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  11017765 cagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 11017693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 23871281 - 23871452
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||| ||||| | ||||||| || |||||||||| |||||||| |||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  23871281 aggctttgtctgggagtttggagggaaagggaggggagggctttggggggttggaaatatatagaaaaatggataaaatattcacattttttgaaagaac 23871380  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  23871381 agttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 23871452  T

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Target: chr1; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 166 - 329
Target Start/End: Original strand, 1688033 - 1688199
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    |||||| |||||||||| | |||||||||| |||||||||| |||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||    
T  1688033 taaggcgttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatgaacaaaaaattcacattttttgaaaga 1688132  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattata 329  Q
    ||||| ||||||| ||||||||||||||||||   |||||||||||||| ||||||| |||||||||    
T  1688133 acagtcttttagagaatgataaactaatacttatgattaatatacttttaattttaaaaatattata 1688199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 13061212 - 13061386
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||| ||||||||| | | |||||||||| ||||||||||  ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  13061212 taaggttttgtttggaagtttggaggggaagggaggggagggttttggggggttggaaatatatagagaaatggacaaaaaattcacattttttgaaaga 13061311  T
Q  266 acag-ttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||| ||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  13061312 acagtttttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 13061386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 169 - 336
Target Start/End: Complemental strand, 13255605 - 13255436
Alignment:
Q  169 ggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaaca 268  Q
    ||||||||| |||| | |||||| ||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  13255605 ggctttgttggggagtttggaggagaagggaggggagggctttgggg-gttggaaatatatagaaaaatggacaaaaaatttacattttttgaaagaaca 13255507  T
Q  269 gttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
     ||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||| ||||    
T  13255506 attttttagagaatgataaactaatacttatgattaatatacttttgattttaagaatattataacaacat 13255436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 27500249 - 27500076
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    |||||| |||||||||| | ||||| |||| |||||||||| |||||||| ||||||||||||||||||||||   |||||||||| |||||||||||||    
T  27500249 taaggcattgtttgggagtttggagaggaagggaggggagggctttggggggttggaaatatatagaaaaatgacaaaaaaattcacattttttgaaaga 27500150  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||  ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  27500149 acagttttttagtgaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 27500076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 167 - 336
Target Start/End: Complemental strand, 38795229 - 38795063
Alignment:
Q  167 aaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaa 266  Q
    |||||||||||||||| | |||||||||| ||||||||| ||||||| | ||||||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  38795229 aaggctttgtttgggagtttggaggggaagggaggggagaactttggtgggttggaaatatatagaaaaattgacaaaaaaatcacattttttgaaagaa 38795130  T
Q  267 cagttttttagaaaatgataaactaatacttattaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||| |||||||||||||   | || ||||||||||| ||||||||||||||||||| ||||    
T  38795129 cagttttttagagaatgataaactaa---tgatgaatatacttttaattttaagaatattataacaacat 38795063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 168 - 331
Target Start/End: Complemental strand, 15464074 - 15463907
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | || ||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15464074 aggctttgtttgggagtttgaaggggaagggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 15463975  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttga-ttttaagaatattataac 331  Q
      ||||||||| ||||||||||||||||||   |||||||||||||| | ||||||||||||||||||    
T  15463974 gtttttttagagaatgataaactaatacttatgattaatatacttttaatttttaagaatattataac 15463907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 2925753 - 2925924
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||| | || ||||||| |||||||||  ||||| ||  |||||||||||||||||||||||||||||||||| ||||||||||| |    
T  2925753 taaggctttgtttgggagtttgaaggggaagggaggggagagctttgagg--ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaaa 2925850  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||| ||||||||||||||||||| ||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  2925851 acaattttttagaaaatgataaaataatacttatgattaatatacttttaattttaagaatattataacaacat 2925924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 43571787 - 43571954
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | ||||| |||| |||||||| | |||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| |||    
T  43571787 aggctttgtttgggagtttggagaggaagggaggggaaggctttggggggttggaaatatatacaaaaatggacaagaaattcacattttttgaaaaaac 43571886  T
Q  268 agttttttagaaaatgataaactaatacttattaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||| |||||||||||| || | |||||||||||||| ||||||||||||||||||| ||||    
T  43571887 agttttttagagaatgataaactatta-tgattaatatacttttaattttaagaatattataacaacat 43571954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 896315 - 896484
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||| ||| |||||||||| |||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  896315 aggctttgtttgggagtttggaggagaagggaggggagggctttgggg-gttggaaatatatagaaaaatggacaaaaa-ttcacattttttgaaagaac 896412  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    || |||||| | |||| |||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  896413 agatttttaaagaatggtaaactaatacttataattaatatacttttaattttaagaatattataacaacat 896484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 42161872 - 42162042
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | ||||||||||  ||||||||| |||||||| |||||||||||||| |||||| ||||| ||||||| |||||||||||||||    
T  42161872 aggctttgtttgggagtttggaggggaagagaggggagggctttgggg-gttggaaatatataaaaaaatagacaataaattcacattttttgaaagaac 42161970  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||| ||||||||||||||| ||   |||||||||||||| ||||||| ||||||||||| ||||    
T  42161971 agttttttagagaatgataaactaatatttatgattaatatacttttaattttaaaaatattataacaacat 42162042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 168 - 329
Target Start/End: Complemental strand, 50247859 - 50247695
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||| ||||||| | |||||||||| ||||||||||  ||||||  |||||||||||||||||||||||||||| |||||| ||||||| ||||||     
T  50247859 aggctttctttgggagtttggaggggaagggaggggagggttttgggtggttggaaatatatagaaaaatggacaaataattcacattttttaaaagaat 50247760  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattata 329  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||| ||||||| |||||||||    
T  50247759 agttttttagagaatgataaactaatacttatgattaatatacttttaattttaaaaatattata 50247695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 1523858 - 1523687
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| ||| |||||   ||||||| ||||||||||||| ||||||||||||||||||||| ||||||| |||||||    
T  1523858 aggctttgtttgggagtttggaggggaatggatgggagagttttggggggttggaaatatattgaaaaatggacaaaaaattcacatttttttaaagaac 1523759  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |  |||||| | ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  1523758 aaatttttaaagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 1523687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 217 - 336
Target Start/End: Original strand, 42488493 - 42488616
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaattcatatttt-ttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttg 312  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||    
T  42488493 gttggaaatatatagaaaaatggacaaaaaattcacatttttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatacttttg 42488592  T
Q  313 attttaagaatattataactacat 336  Q
    ||||||||||||||||||| ||||    
T  42488593 attttaagaatattataacaacat 42488616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 217 - 336
Target Start/End: Complemental strand, 12294026 - 12293904
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttga 313  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||| |    
T  12294026 gttggaaatatatagaaaaatggacaaaaatttcacattttttgaaagaacagttttttagagaatgataaactaatacttattattaatatacttttaa 12293927  T
Q  314 ttttaagaatattataactacat 336  Q
    |||||||||||||||||| ||||    
T  12293926 ttttaagaatattataacaacat 12293904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 170 - 336
Target Start/End: Original strand, 47905511 - 47905678
Alignment:
Q  170 gctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacag 269  Q
    |||||||||| || | || ||||||| ||| ||||||  |||||||  |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  47905511 gctttgtttgagagtttgaaggggaagggaagggaggggtttgggg--ttggaaatatatagaaaaatggacaaaaaattcacattttttaaaagaacag 47905608  T
Q  270 ttttttagaaaatgataaactaatac---ttattaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| ||||||||||||||||   | |||||||||||||| ||||||||||||||||||| ||||    
T  47905609 ttttttagagaatgataaactaatactaatgattaatatacttttaattttaagaatattataacaacat 47905678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 168 - 299
Target Start/End: Complemental strand, 26940842 - 26940711
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||| | | |||||||||| | ||||||||| ||||||| |||||||||||||||||||||| |||||||||||| ||||| | |||||||    
T  26940842 aggctttgtttggaagtttggaggggaaggaaggggaggattttggggggttggaaatatatagaaaaatgaacaaaaaattcacattttgtaaaagaac 26940743  T
Q  268 agttttttagaaaatgataaactaatacttat 299  Q
    ||||||||||||||||||||||||||||||||    
T  26940742 agttttttagaaaatgataaactaatacttat 26940711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 45565394 - 45565222
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    |||||||||||||| || | |||||||||| ||||||||||  |||| || |||||||||||||||||||||||||| |||||| | |||||||||||||    
T  45565394 taaggctttgtttgcgagtttggaggggaagggaggggagggttttgaggggttggaaatatatagaaaaatggaca-aaaatttacattttttgaaaga 45565296  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||| ||||||||||| ||||||   |||||||||||||| ||||||| |||| |||||| ||||    
T  45565295 acagttttttagagaatgataaacttatacttatgattaatatacttttaattttaaaaatactataacaacat 45565222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 47206241 - 47206413
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggagggg-aggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaa 266  Q
    ||||| ||||||| | | |||||||||| ||||||| ||| |||||||| ||||||||||||||||||||| || |||||||||| ||||||||||||||    
T  47206241 aggctctgtttggcagtatggaggggaagggagggggagggctttggggggttggaaatatatagaaaaattgataaaaaattcacattttttgaaagaa 47206340  T
Q  267 cagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||| |||||||| ||| |||||| |||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  47206341 cagctttttagagaattataaacaaatacttatgattaatatacttttaattttaagaatattataacaacat 47206413  T

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Target: chr1; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 39889505 - 39889647
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatact 296  Q
    ||||||||||  ||| ||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  39889505 ggaggggagggttttagggggttggaaatatatagaaaaattgacaaaaaattcacattttttgaaagaacggttttttagagaatgataaactaatact 39889604  T
Q  297 t---attaatatacttttgattttaagaatattataactacat 336  Q
    |   |||||||||||||| |||||| |||||||||||| ||||    
T  39889605 tatgattaatatacttttaattttatgaatattataacaacat 39889647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 2175601 - 2175426
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa--ttcatattttttgaaa 263  Q
    ||||| ||||||||||| | |||||||| | |||||| |||||||||||| ||| |||||||||||||||||||||||||||  |||| |||||||||||    
T  2175601 taaggttttgtttgggagtttggaggggtagggagggaaggactttgggg-gttcgaaatatatagaaaaatggacaaaaaaaattcacattttttgaaa 2175503  T
Q  264 gaacagtttttt-agaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactacat 336  Q
    ||||| |||||| ||| ||||||||||||||| ||||   |||||||||||| ||||||||||||||||||| ||||    
T  2175502 gaacaatttttttagagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacat 2175426  T

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Target: chr1; HSP #26
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 50403005 - 50402833
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaa-aaaattcatattttttgaaagaa 266  Q
    ||||||||||||||| | ||||||| || |||| ||||| |||||| |  |||||||||||||||||||||||||| |||||||| ||||||| ||||||    
T  50403005 aggctttgtttgggagtttggagggtaagggagaggagggctttggaggattggaaatatatagaaaaatggacaaaaaaattcacatttttttaaagaa 50402906  T
Q  267 cagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| || ||||||||||||||||||   ||||||||| |||| ||||||| ||||||||||| ||||    
T  50402905 cagtttttttgagaatgataaactaatacttatgattaatatatttttaattttaaaaatattataacaacat 50402833  T

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Target: chr1; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 17675428 - 17675288
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatact 296  Q
    |||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| ||||||||||||||| |    
T  17675428 ggaggggagggctttgggg-gttgaaaatatatagaaaaatggacaaaaaaatcata-tttttgaaagaacaattttttagagaatgataaactaatatt 17675331  T
Q  297 t---attaatatacttttgattttaagaatattataactacat 336  Q
    |   |||||||||||||| ||||||||||||||||||| ||||    
T  17675330 tatgattaatatacttttaattttaagaatattataaccacat 17675288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 172 - 299
Target Start/End: Original strand, 7401388 - 7401515
Alignment:
Q  172 tttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtt 271  Q
    ||||||||||| | ||||||||||  ||||||||| |||||||| ||| |||||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  7401388 tttgtttgggagtttggaggggaagagaggggagggctttggggggttagaaatatatagaaaaatggataaaaaattcacattttttgaaaaaacagtt 7401487  T
Q  272 ttttagaaaatgataaactaatacttat 299  Q
    ||||||| ||| |||||||||| |||||    
T  7401488 ttttagagaataataaactaatgcttat 7401515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 191 - 336
Target Start/End: Original strand, 8156187 - 8156326
Alignment:
Q  191 gggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaacagttttttagaaaatgataaac 289  Q
    ||||| |||||||||| |||||||| |||| |||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||    
T  8156187 gggaagggaggggagggctttgggg-gttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacaattttttagagaatgataaac 8156285  T
Q  290 taatacttattaatatacttttgattttaagaatattataactacat 336  Q
    ||||||      |||||||||| ||||||||||||||||||| ||||    
T  8156286 taatac------atatacttttaattttaagaatattataacaacat 8156326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 191 - 330
Target Start/End: Original strand, 26756996 - 26757138
Alignment:
Q  191 gggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaact 290  Q
    ||||| ||| |||||| |||||||||||||||||||| |||||| ||||| |||||||||| ||||| | ||||||||  |||||| | |||||||||||    
T  26756996 gggaagggaagggagggctttggggagttggaaatatgtagaaatatggataaaaaattcacattttgtaaaagaacatatttttaaagaatgataaact 26757095  T
Q  291 aatactt---attaatatacttttgattttaagaatattataa 330  Q
    |||||||   |||||||||||||| ||||||||||||||||||    
T  26757096 aatacttatgattaatatacttttaattttaagaatattataa 26757138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 17688577 - 17688431
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaata-- 294  Q
    |||||||||| |||||||| |||| ||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||| ||| |||||||| ||      
T  17688577 ggaggggagggctttggggggttgaaaatatataaaaaaatggataaaaaattcacattttttgaaagaacagttttttagagaataataaactagtaag 17688478  T
Q  295 -----cttattaatatacttttgattttaagaatattataactacat 336  Q
          | |||||||||||||| ||||||||||||||||||| ||||    
T  17688477 tatttatgattaatatacttttaattttaagaatattataacaacat 17688431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 197 - 331
Target Start/End: Original strand, 51246423 - 51246558
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatact 296  Q
    |||||||||| ||||||||  ||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||| ||||||||||||||  |    
T  51246423 ggaggggagggctttgggg--ttggaaatatataaaaaaatgcataaaaaatttacattttttgaaagaacagttttttagagaatgataaactaatctt 51246520  T
Q  297 t---attaatatacttttgattttaagaatattataac 331  Q
    |   |||||||||||||| ||||||| ||| |||||||    
T  51246521 tatgattaatatacttttaattttaaaaattttataac 51246558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 50476793 - 50476620
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||| | |||||||||| ||  ||||||  ||||| | ||  |||||||||||| ||||||| |||   |||| |||||||||||||    
T  50476793 taaggctttgtttgggagtttggaggggaagggtagggagggttttggagggtgagaaatatatagagaaatggagaaatctttcacattttttgaaaga 50476694  T
Q  266 acagttttttagaaaatgataaactaatacttatta---atatacttttgattttaagaatattataactacat 336  Q
     || ||||| ||| |||||||||||||| |||||||   ||||| |||| ||||||||||||||||||| ||||    
T  50476693 gcaatttttaagataatgataaactaatgcttattattgatatatttttaattttaagaatattataacaacat 50476620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 204 - 329
Target Start/End: Original strand, 40707056 - 40707186
Alignment:
Q  204 aggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatg--ataaactaatactt---a 298  Q
    |||| ||||| | |||||||||||||||||||||||| |||||||| | ||||||| |||||||||||||||||| ||||  ||||||||||||||   |    
T  40707056 aggagtttggagggttggaaatatatagaaaaatggataaaaaattaacattttttaaaagaacagttttttagagaatgatataaactaatacttataa 40707155  T
Q  299 ttaatatacttttgattttaagaatattata 329  Q
    || |||||||||| || |||| |||||||||    
T  40707156 ttgatatacttttaatattaaaaatattata 40707186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 7965655 - 7965572
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaattcatatttttt-gaaagaacagttttttagaaaatgataaactaatacttat 299  Q
    ||||||||||||||||||||| || |||||||||| ||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  7965655 gttggaaatatatagaaaaatagataaaaaattcacatttttttgaaagaacagatttttagagaatgataaactaatacttat 7965572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 166 - 331
Target Start/End: Complemental strand, 39509033 - 39508867
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||| | |||||||||  ||| |||||  |||||| |||| ||||||||||||||||||| | |||   |||| |||||| ||||||    
T  39509033 taaggctttgtttgggagtttggaggggaggggaagggagagctttggcgagtgggaaatatatagaaaaatgaaaaaatctttcacatttttggaaaga 39508934  T
Q  266 acagttttttagaaaatgataaactaatacttattaatata-cttttgattttaagaatattataac 331  Q
     ||  |||||||| ||| ||||| ||||  |||||||||||  |||| |||||||||||||||||||    
T  39508933 gcaaatttttagagaatcataaattaatgtttattaatatatttttttattttaagaatattataac 39508867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 220 - 336
Target Start/End: Original strand, 938117 - 938240
Alignment:
Q  220 ggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaac-taata------cttattaatatacttttg 312  Q
    |||||||||||||| |||||| |||||||||||||||||| |||||||| |||| |||| |||||||||| |||||       ||||||||||||||||     
T  938117 ggaaatatatagaagaatggataaaaaattcatattttttaaaagaacaattttgtagagaatgataaacttaatatttatgattattaatatactttta 938216  T
Q  313 attttaagaatattataactacat 336  Q
    |||||||||||| |||||| ||||    
T  938217 attttaagaatactataacaacat 938240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 290
Target Start/End: Original strand, 30538591 - 30538713
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaa-atggacaaaaaattcatattttttgaaagaa 266  Q
    ||||||||||||| | | |||||||||| ||| || |||  |||| || |||||||||||||| |||| |||||||||||||||| ||||||||||||||    
T  30538591 aggctttgtttggaagtttggaggggaagggaagg-agggttttgaggggttggaaatatataaaaaaaatggacaaaaaattcacattttttgaaagaa 30538689  T
Q  267 cagttttttagaaaatgataaact 290  Q
    | |||||||| | |||||||||||    
T  30538690 ccgttttttatagaatgataaact 30538713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 331
Target Start/End: Original strand, 36668512 - 36668633
Alignment:
Q  213 gggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatactt 309  Q
    |||||| | ||||||| ||| ||||||| ||||  |||| |||||||||||||||| |||| | ||||||||||||||||| |||   ||||||||| ||    
T  36668512 gggagtggaaaatatacagagaaatggagaaaattttcacattttttgaaagaacaattttattgaaaatgataaactaatgcttatgattaatatattt 36668611  T
Q  310 ttgattttaagaatattataac 331  Q
    || |||||||||||||||||||    
T  36668612 ttaattttaagaatattataac 36668633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 14153290 - 14153203
Alignment:
Q  252 tattttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||||||||   ||||||| ||||||||||||||| ||||   |||||||||||| ||||||||||||||||||| ||||    
T  14153290 tattttttgaaagaacaaaattttagagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacat 14153203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 30543266 - 30543349
Alignment:
Q  253 attttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataacta 333  Q
    |||||||||||||| | ||||||||| ||||||||| ||||||||   ||||||||| |||| ||||||||||||| |||||||    
T  30543266 attttttgaaagaataattttttagagaatgataaattaatacttatgattaatatatttttaattttaagaatatcataacta 30543349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 328
Target Start/End: Original strand, 28773247 - 28773372
Alignment:
Q  209 tttggggagttggaaatatatagaaaaatggacaaaaa--attcatattttttgaaagaacagttttttagaaaatgataaactaa----tacttattaa 302  Q
    ||||||| | |||||||||||||||||||||| |||    || || |||||| ||||||||| ||||||||| |||||||||||||    || | |||||    
T  28773247 tttggggggatggaaatatatagaaaaatggaaaaatcttatccacatttttcgaaagaacaattttttagagaatgataaactaatgtttattgattaa 28773346  T
Q  303 tatacttttgattttaagaatattat 328  Q
    |||| |||  ||||||||||||||||    
T  28773347 tatattttaaattttaagaatattat 28773372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 41432682 - 41432751
Alignment:
Q  270 ttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| ||| ||||| ||||||||||   ||||||| |||| ||||||||||||||||||||||||    
T  41432682 ttttttagagaataataaattaatacttatgattaatatatttttaattttaagaatattataactacat 41432751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 220 - 336
Target Start/End: Complemental strand, 28748401 - 28748282
Alignment:
Q  220 ggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattt 316  Q
    ||||||||| |||||||| || |||   ||| |||||| |||||||| | ||||||  | ||||||||||||||||||   ||||||||| |||  ||||    
T  28748401 ggaaatatacagaaaaattgagaaatctttcgtattttatgaaagaataattttttgaagaatgataaactaatacttatgattaatatattttaaattt 28748302  T
Q  317 taagaatattataactacat 336  Q
    || |||||||||||| ||||    
T  28748301 tatgaatattataacaacat 28748282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 33579429 - 33579351
Alignment:
Q  255 tttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataa 330  Q
    |||||||||||  | ||||||||| ||||||||| |||| |||||   ||||||| |||| ||||||||||||||||||    
T  33579429 tttttgaaagagtaattttttagagaatgataaattaatgcttatgactaatatatttttaattttaagaatattataa 33579351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 336
Target Start/End: Complemental strand, 50162321 - 50162227
Alignment:
Q  248 ttcatattttttgaaagaacagttttttagaaaatgataaactaatactt------attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||||||||  | ||||||||| ||||| ||| ||||| |       ||||||||| |||| ||||||||||||||||||||||||    
T  50162321 ttcatattttttgaaagagaaattttttagagaatgaaaaattaataatatttatgattaatatatttttaattttaagaatattataactacat 50162227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 52073356 - 52073445
Alignment:
Q  248 ttcatattttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactac 334  Q
    |||| |||||||||||||  | ||||||||| ||||||||| |||   ||||   ||||||| |||| ||||||||||||||||||||||    
T  52073356 ttcacattttttgaaagagtaattttttagagaatgataaattaacgtttatgattaatatatttttaattttaagaatattataactac 52073445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 7964104 - 7964066
Alignment:
Q  298 attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  7964104 attaatatacttttaattttaagaatattataacaacat 7964066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 9173620 - 9173698
Alignment:
Q  221 gaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatacttat 299  Q
    |||||||||||||||||| | |||  | | | ||||||| ||||||||  |||||||| |||||||||||||| |||||    
T  9173620 gaaatatatagaaaaatgaaaaaatcaatgacatttttttaaagaacaaatttttagataatgataaactaatgcttat 9173698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 336
Target Start/End: Original strand, 35619465 - 35619503
Alignment:
Q  298 attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  35619465 attaatatacttttaattttaagaatattataacaacat 35619503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 333
Target Start/End: Complemental strand, 1063489 - 1063430
Alignment:
Q  278 aaaatgataaactaatacttat---taatatacttttga-ttttaagaatattataacta 333  Q
    ||||||||||||||||||||||   ||||||| |||| | ||||||||||||||||||||    
T  1063489 aaaatgataaactaatacttatgcttaatatattttttaattttaagaatattataacta 1063430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 18786416 - 18786379
Alignment:
Q  299 ttaatatacttttgattttaagaatattataactacat 336  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  18786416 ttaatatatttttaattttaagaatattataactacat 18786379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 9595826 - 9595786
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggagg 206  Q
    ||||||||||||||||| | |||||||||| ||||||||||    
T  9595826 taaggctttgtttgggagtttggaggggaagggaggggagg 9595786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 331
Target Start/End: Original strand, 27102722 - 27102808
Alignment:
Q  248 ttcatattttttgaaagaacagttttttagaaaatgataaactaa---tacttattaatatacttttgattttaagaatattataac 331  Q
    |||||||||||||||||||| ||| |||| | ||||||| | |||   || ||||||||||| |||| | ||||| |||||||||||    
T  27102722 ttcatattttttgaaagaacggttgtttaaagaatgatagattaatgttaattattaatatatttttaaatttaaaaatattataac 27102808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 39179317 - 39179277
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggagg 206  Q
    ||||||||||||||||| | |||||||||| ||||||||||    
T  39179317 taaggctttgtttgggagtttggaggggaagggaggggagg 39179277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 5e-57; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 165 - 336
Target Start/End: Complemental strand, 43189123 - 43188949
Alignment:
Q  165 ataaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaag 264  Q
    |||||||||||||||||| | |||| ||||| |||| ||||| |||||||| |||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  43189123 ataaggctttgtttgggagtttggatgggaagggagaggagggctttggggggttggaaatatatagaaaaatgaacaaaaaaatcacattttttgaaag 43189024  T
Q  265 aacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  43189023 aacagttttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 43188949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 28437359 - 28437531
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggac-aaaaaattcatattttttgaaagaa 266  Q
    |||||||||||| || | |||||||||| |||||||||| |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  28437359 aggctttgtttgagagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaa 28437458  T
Q  267 cagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    || ||||||||| ||||||||||||||| ||   |||||||||||||| ||||||||||||||||||| ||||    
T  28437459 caattttttagagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacat 28437531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 168 - 327
Target Start/End: Original strand, 34651871 - 34652033
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| |||||||| | ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34651871 aggctttgtttgggagtttggaggggaagggaggggatggctttgaggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 34651970  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatatta 327  Q
    | ||||||||| ||||||||||||||||||   |||||||||||||| |||||||||| ||||    
T  34651971 aattttttagagaatgataaactaatacttatgattaatatacttttaattttaagaagatta 34652033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 166 - 330
Target Start/End: Original strand, 7666980 - 7667148
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggac-aaaaaattcatattttttgaaag 264  Q
    ||||||||||||||||| | |||||||||| |||||||||| |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  7666980 taaggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaag 7667079  T
Q  265 aacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataa 330  Q
    || | ||||||||| ||||||||||||||||||   |||||||||| ||| ||||||||||||| ||||    
T  7667080 aataattttttagagaatgataaactaatacttatgattaatatacatttaattttaagaatatcataa 7667148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 166 - 331
Target Start/End: Complemental strand, 38236057 - 38235891
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||| | |||||||||| |||||||||   |||||||   ||||||||||||||||||||||||||||||||| |||||||||||||    
T  38236057 taaggctttgtttgggagtttggaggggaagggaggggagagttttggggc--tggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 38235960  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataac 331  Q
    |||| |||||||| ||||||||||||||||||   |||||||||||||| ||||||| |||||||||||    
T  38235959 acagctttttagagaatgataaactaatacttatgattaatatacttttaattttaaaaatattataac 38235891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 170 - 330
Target Start/End: Original strand, 47275821 - 47275985
Alignment:
Q  170 gctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaaca 268  Q
    ||||||||||||| | |||||||||| ||| | |||| |||||||| |||| ||||||||||||||||| |||||||| |||| ||||||||||||||||    
T  47275821 gctttgtttgggagtttggaggggaagggaagtgagggctttggggggttgaaaatatatagaaaaatgtacaaaaaaattcacattttttgaaagaaca 47275920  T
Q  269 gttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataa 330  Q
    |||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||    
T  47275921 gttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataa 47275985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 172 - 336
Target Start/End: Original strand, 41002074 - 41002240
Alignment:
Q  172 tttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtt 271  Q
    ||||||||||| | ||| |||||| ||| ||||||| ||||||| ||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||    
T  41002074 tttgtttgggagtttggtggggaagggaagggaggattttgggg-gttggaaatatatagaataatagacaaaaaattcacattttttgaaagaacagtt 41002172  T
Q  272 ttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||| ||||||||||||||||||   ||||||||| |||| ||||||||||||||||||| ||||    
T  41002173 ttttagataatgataaactaatacttatgattaatatatttttaattttaagaatattataacaacat 41002240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 43665016 - 43665158
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatact 296  Q
    |||||||||| |||||||| |||| ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||| |||||||||||| ||||    
T  43665016 ggaggggagggctttggggggttgaaaatatatagaaaaatggacaaaaaattcaatttttttgaaagaacatttttttagagaatgataaactactact 43665115  T
Q  297 t---attaatatacttttgattttaagaatattataactacat 336  Q
    |   ||||||||| |||| ||||||||||||||||||| ||||    
T  43665116 tatgattaatatatttttaattttaagaatattataacaacat 43665158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 186 - 336
Target Start/End: Complemental strand, 19644540 - 19644384
Alignment:
Q  186 tggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaa--aaaattcatattttttgaaagaacagttttttagaaaatg 283  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||| |||     
T  19644540 tggaggggaaaggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaaaattcacattttttgaaagaaccgttttttagagaatt 19644441  T
Q  284 ataaactaatactt---attaat-atacttttgattttaagaatattataactacat 336  Q
    ||||| ||||||||   |||||| |||||||| ||||||||||||||||||| ||||    
T  19644440 ataaattaatacttatgattaataatacttttaattttaagaatattataacaacat 19644384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 218 - 331
Target Start/End: Original strand, 42620220 - 42620336
Alignment:
Q  218 ttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgat 314  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||||||||||   |||||||||||||| ||    
T  42620220 ttggaaatatatagaaaaatggacaaaaaattcacattttttaaaataacagttttttagagaatgataaactaatacttatgattaatatacttttaat 42620319  T
Q  315 tttaagaatattataac 331  Q
    |||||||||||||||||    
T  42620320 tttaagaatattataac 42620336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 33113461 - 33113628
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaa 266  Q
    ||||||||||||||| | |||||||||| ||| |||    |||||||| ||||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  33113461 aggctttgtttgggagtttggaggggaagggaaggg----ctttgggg-gttggaaatatatagaaaaatcgacaaaaaaattcacattttttgaaagaa 33113555  T
Q  267 cagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    || ||||| ||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  33113556 caatttttcagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 33113628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 186 - 336
Target Start/End: Original strand, 5967889 - 5968042
Alignment:
Q  186 tggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaacagttttttagaaaatga 284  Q
    ||||| |||| ||||||||||  ||||||| |||||||||||||| ||||||||| |||||| |||| ||||||| |||||||||||||||||| |||||    
T  5967889 tggagaggaagggaggggagggatttgggg-gttggaaatatataaaaaaatggataaaaaaattcacattttttaaaagaacagttttttagagaatga 5967987  T
Q  285 taaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  5967988 taaactaatacttatgattaatatacttttaattttaagaatattataacaacat 5968042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 209 - 336
Target Start/End: Original strand, 33810071 - 33810201
Alignment:
Q  209 tttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatat 305  Q
    ||||||| |||| ||||| ||||||||||||| ||||||||||||||||||||||||| | ||||||||| ||||||||||||||| ||   ||||||||    
T  33810071 tttggggggttgaaaatacatagaaaaatggataaaaaattcatattttttgaaagaataattttttagagaatgataaactaatatttatgattaatat 33810170  T
Q  306 acttttgattttaagaatattataactacat 336  Q
    |||||| ||||||||||||||||||| ||||    
T  33810171 acttttaattttaagaatattataacaacat 33810201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 200 - 331
Target Start/End: Complemental strand, 44720311 - 44720178
Alignment:
Q  200 ggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt-- 297  Q
    |||||||||||| | | |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||||||||||      
T  44720311 ggggaggactttagag-gttgaaaatatatagaaaaatggacaaaatattcacattttttgaaagaacagttttgtagagaatgataaactaatacttat 44720213  T
Q  298 -attaatatacttttgattttaagaatattataac 331  Q
     |||| ||||||||| |||||||||||||||||||    
T  44720212 gattagtatacttttaattttaagaatattataac 44720178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 3658327 - 3658500
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||| | |||||||||| | ||| |||| |||||||| |||  |||||||||||||||||||||||||||||| ||||||||||| |    
T  3658327 taaggctttgtttgggagtttggaggggaaggaaggagagggctttgggg-gttaaaaatatatagaaaaatggacaaaaaattcacattttttgaaaaa 3658425  T
Q  266 acag-ttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    | || ||||||| ||||| ||||| ||||||||   |||||||||| ||||| ||||||||| ||||||| ||||    
T  3658426 atagtttttttacaaaataataaagtaatacttatgattaatatacctttgactttaagaatgttataacaacat 3658500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 217 - 336
Target Start/End: Original strand, 23620661 - 23620782
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttga 313  Q
    |||||| |||||||||||||| ||||||||||||| ||||||  |||||||||||||||||| ||||||||||||||||||   ||||||||| |||| |    
T  23620661 gttggatatatatagaaaaattgacaaaaaattcacatttttctaaagaacagttttttagagaatgataaactaatacttatgattaatata-ttttaa 23620759  T
Q  314 ttttaagaatattataactacat 336  Q
    |||||||||||||||||| ||||    
T  23620760 ttttaagaatattataacaacat 23620782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 39410245 - 39410337
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatacttattaatatactt 309  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||  | ||||||||||||    
T  39410245 gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacggttttttagaaaatgataaaataattatgattaatatactt 39410337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 166 - 331
Target Start/End: Complemental strand, 36747565 - 36747392
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaa--tggacaaaaaattcatattttttgaaa 263  Q
    |||| ||||||||| || | |||||||||| |||  |||||  |||| || |||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  36747565 taagtctttgtttgagagtttggaggggaagggaaaggagggttttgaggggttggaaatatataaaaaaaaatggacaaaaaattcacattttttgaaa 36747466  T
Q  264 gaacagtt--ttttagaaaatgataaactaatactt---attaatatac-ttttgattttaagaatattataac 331  Q
    ||||||||  ||||||| ||||| ||||||||||||   |||||||||| |||| |||||||||||||||||||    
T  36747465 gaacagttttttttagagaatgaaaaactaatacttatgattaatatactttttaattttaagaatattataac 36747392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 217 - 336
Target Start/End: Original strand, 33406498 - 33406621
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttg 312  Q
    |||| ||||||||||||||||||| |||||| |||| ||||||| |||||| | ||||||||| ||||||||||||| ||||   ||||||||||||||     
T  33406498 gttgaaaatatatagaaaaatggataaaaaaattcacattttttaaaagaataattttttagagaatgataaactaacacttatgattaatatactttta 33406597  T
Q  313 attttaagaatattataactacat 336  Q
    ||||||||||||||||||| ||||    
T  33406598 attttaagaatattataacaacat 33406621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 217 - 325
Target Start/End: Complemental strand, 42220254 - 42220143
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttga 313  Q
    ||||||||||||||||||||| |  ||||||||  ||||||||||||||||| ||||||||| ||||||||||||||||||   ||||||||| |||| |    
T  42220254 gttggaaatatatagaaaaataggaaaaaaatttctattttttgaaagaacaattttttagataatgataaactaatacttatgattaatatatttttaa 42220155  T
Q  314 ttttaagaatat 325  Q
    ||||||||||||    
T  42220154 ttttaagaatat 42220143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 233 - 331
Target Start/End: Original strand, 43778457 - 43778559
Alignment:
Q  233 aaaatggacaaaaaattcatatttt-ttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattat 328  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| || ||||||||||||||| ||   |||||||||||||| ||||||||||||||||    
T  43778457 aaaatggacaaaaaattcacatttttttgaaagaacagtttttttgagaatgataaactaatatttatgattaatatacttttaattttaagaatattat 43778556  T
Q  329 aac 331  Q
    |||    
T  43778557 aac 43778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 23465816 - 23465989
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||| | |||||||||  ||| |||| |||||||  | ||||||||||||  | |||||||  |||   |||| ||||||| |||||    
T  23465816 taaggctttgtttgggagtttggaggggaggggaagggaagactttgaagggttggaaatataggggaaaatggtaaaatctttcacattttttaaaaga 23465915  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    | ||||||||||| ||||||||| |||| |||   |||||||||  ||| ||||||||||||||||||||||||    
T  23465916 atagttttttagagaatgataaattaattcttatgattaatatatatttaattttaagaatattataactacat 23465989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 46449362 - 46449270
Alignment:
Q  242 aaaaaattcatattttttgaaagaacagtttttt-agaaaatgataaactaatacttat---taatatacttttgattttaagaatattataa 330  Q
    |||||||||| ||||||||||||| ||||||||| ||| ||||||||| ||||||||||   |||||||||||| ||||||||||||||||||    
T  46449362 aaaaaattcacattttttgaaagatcagtttttttagagaatgataaattaatacttataattaatatacttttaattttaagaatattataa 46449270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 33406414 - 33406489
Alignment:
Q  172 tttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa 247  Q
    ||||||||||| | |||| ||||| |||||||||||||||| || |||| ||||||||| ||||||||| ||||||    
T  33406414 tttgtttgggagtttggatgggaagggaggggaggactttgaggggttgaaaatatataaaaaaatggataaaaaa 33406489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 207 - 336
Target Start/End: Complemental strand, 14676454 - 14676322
Alignment:
Q  207 actttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatacttat---taat 303  Q
    ||||||| || |||||||||||  | ||||||| ||||   |||| |||||||||||||  | ||||||||  ||||||||| |||| |||||   ||||    
T  14676454 actttggagatttggaaatataggggaaaatggtcaaatctttcacattttttgaaagagtaattttttagggaatgataaattaatgcttatggttaat 14676355  T
Q  304 atacttttgattttaagaatattataactacat 336  Q
    ||| |||  ||||||||||||||||||||||||    
T  14676354 atattttcaattttaagaatattataactacat 14676322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 18789106 - 18789029
Alignment:
Q  222 aaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatacttat 299  Q
    ||||||||||||||||| | |||   || |||||||||||||||||| ||||||||| || ||||||||||| |||||    
T  18789106 aaatatatagaaaaatgaaaaaatcttttatattttttgaaagaacaattttttagagaaagataaactaattcttat 18789029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 12863525 - 12863602
Alignment:
Q  222 aaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatacttat 299  Q
    |||||| |||||||||||| ||| | |||| ||||||||||||| || ||||| ||| ||||||||| |||| |||||    
T  12863525 aaatatgtagaaaaatggagaaatatttcacattttttgaaagaccaatttttcagataatgataaattaatgcttat 12863602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 16568710 - 16568630
Alignment:
Q  219 tggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatacttat 299  Q
    ||||||||||||||||||| || |||  ||||  ||| |||||||||||   |||||||| |||||||||||||| |||||    
T  16568710 tggaaatatatagaaaaatagaaaaatcattcgcattctttgaaagaactactttttagagaatgataaactaatgcttat 16568630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 16596952 - 16597032
Alignment:
Q  219 tggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatacttat 299  Q
    ||||||||||||||||||| || |||  ||||  ||| |||||||||||   |||||||| |||||||||||||| |||||    
T  16596952 tggaaatatatagaaaaatagaaaaatcattcgcattctttgaaagaactactttttagagaatgataaactaatgcttat 16597032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 331
Target Start/End: Original strand, 22556602 - 22556688
Alignment:
Q  248 ttcatattttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataac 331  Q
    |||| ||||||| |||||  | ||||||||| | |||||||||||| |||||   ||||||| |||| |||||||||||||||||||    
T  22556602 ttcacattttttaaaagagtatttttttagagagtgataaactaatgcttatgattaatatatttttaattttaagaatattataac 22556688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 42266910 - 42266996
Alignment:
Q  253 attttttgaaagaacagttttttagaaaatgataaactaatactta---ttaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||| || | ||||||||| ||||||||| |||| ||||   ||| |||| |||| ||||||||||||||||||| ||||    
T  42266910 attttttgaaaaaataattttttagagaatgataaattaatgcttatgtttactatatttttaattttaagaatattataacaacat 42266996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 336
Target Start/End: Original strand, 36845339 - 36845430
Alignment:
Q  248 ttcatattttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactacat 336  Q
    |||| |||||||||||||  |  |||||||| |||| |||| ||||||||||   || |||| |||| ||||||||||||||||||| ||||    
T  36845339 ttcacattttttgaaagagaaactttttagagaatgttaaattaatacttatgattactatatttttaattttaagaatattataacaacat 36845430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 41471375 - 41471424
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttgggg 215  Q
    |||||||||||||| || | |||||| ||| |||||||||||||||||||    
T  41471375 taaggctttgtttgcgagtttggaggagaagggaggggaggactttgggg 41471424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 326
Target Start/End: Original strand, 24923295 - 24923373
Alignment:
Q  251 atattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatatt 326  Q
    |||||||||||||||   |||||||||| ||||||||| ||||  ||   ||||||||| |||| ||||||||||||||    
T  24923295 atattttttgaaagagtggttttttagagaatgataaattaatgattatgattaatatatttttaattttaagaatatt 24923373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 5e-57; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 168 - 331
Target Start/End: Complemental strand, 41844698 - 41844532
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  41844698 aggctttgtttgggagtttggaggggaagggaggggaggactttggggggttggaaacatatagaaaaatggacaaaaaattcacattttttgaaagaac 41844599  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataac 331  Q
    | ||||||||| ||||||||| ||||||||   |||||||||||||| |||||||||||||||||||    
T  41844598 aattttttagagaatgataaattaatacttatgattaatatacttttaattttaagaatattataac 41844532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 32648820 - 32648993
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||  | |||||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32648820 taaggctttgtttgggggtttggaggggaagggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 32648919  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
     |||||||||||| ||||||||||||||||||   ||||||||| |||| ||||||||||||||||||| ||||    
T  32648920 gcagttttttagagaatgataaactaatacttatgattaatatatttttaattttaagaatattataacaacat 32648993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 166 - 329
Target Start/End: Original strand, 17622289 - 17622454
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||| ||||||||||| | |||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17622289 taaggttttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 17622388  T
Q  266 acagttttttagaaaatgataaactaata--cttattaatatacttttgattttaagaatattata 329  Q
    ||||||||||||| |||||||||||||||   | | |||||||||||| |||||||||||||||||    
T  17622389 acagttttttagagaatgataaactaataatatgactaatatacttttaattttaagaatattata 17622454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 167 - 336
Target Start/End: Complemental strand, 32060910 - 32060738
Alignment:
Q  167 aaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaa 266  Q
    |||||||||||||||| | ||||| |||| |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| ||    
T  32060910 aaggctttgtttgggagtttggagtggaagggaggggagggctttggggggttggaaatatatagaaaaatagacaaaaaattcacattttttgaaaaaa 32060811  T
Q  267 cagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||| ||||||||| ||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  32060810 cagttttttagagaatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacat 32060738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 166 - 331
Target Start/End: Original strand, 36151187 - 36151354
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||| ||||||| | |||||||||| |||||||||||||||||  ||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  36151187 taaggctttatttgggagtttggaggggaagggaggggaggactttgga-agttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 36151285  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataac 331  Q
    | ||||||||||||||||||||||||||||||   |||||||||| ||| |||||||||||||||||||    
T  36151286 atagttttttagaaaatgataaactaatacttatgattaatatacatttaattttaagaatattataac 36151354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 172 - 336
Target Start/End: Original strand, 3126834 - 3127001
Alignment:
Q  172 tttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtt 271  Q
    ||||||||||| | |||||||||| ||| |||||  |||||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  3126834 tttgtttgggagtttggaggggaagggaagggagagctttggggggttgaaaatatatacaaaaatggacaaaaaattcacattttttgaaagaacagtt 3126933  T
Q  272 ttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  3126934 ttttagataatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 3127001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 17873459 - 17873288
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||| | | |||||||||| |||| |||| | ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  17873459 aggctttgtttggaagtttggaggggaagggagaggagaattttggggggttggaaatatatagaaaaatgcacaaaaaattcatatttttttaaagaac 17873360  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    | ||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  17873359 aattttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 17873288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 20534190 - 20534019
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaa 266  Q
    ||||||||||||||| | |||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  20534190 aggctttgtttgggagtttggaggggaagggaggggagggctttgggg-gttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaa 20534092  T
Q  267 cagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    | |||||||||| ||||||||||||||||||   ||||| |||||||| |||| |||||||||||||| ||||    
T  20534091 ccgttttttagagaatgataaactaatacttatgattaacatacttttaatttaaagaatattataacaacat 20534019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 168 - 331
Target Start/End: Complemental strand, 24291649 - 24291482
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggagga-ctttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaa 266  Q
    ||||||||||||| | | |||||| ||| |||||||| || ||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24291649 aggctttgtttggaagtttggaggtgaagggaggggaagagctttgggggtttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 24291550  T
Q  267 cagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataac 331  Q
    ||| |||||||| ||||||||||||||||||   |||||||||||||| |||||||||||||||||||    
T  24291549 cagctttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataac 24291482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 38317075 - 38317217
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatact 296  Q
    |||||||||| |||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  38317075 ggaggggagggctttaggggcttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatact 38317174  T
Q  297 t---attaatatacttttgattttaagaatattataactacat 336  Q
    |   |||||||||||||| ||||||||||||||||||| ||||    
T  38317175 tatgattaatatacttttaattttaagaatattataacaacat 38317217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 41363628 - 41363801
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    |||||||||||||| || | |||||| ||| |||||||||| |||||||| |||  |||||||||||||||| || |||||||||| |||||||||||||    
T  41363628 taaggctttgtttgagagtttggaggcgaagggaggggagggctttggggggttaaaaatatatagaaaaattgataaaaaattcacattttttgaaaga 41363727  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||| | ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  41363728 acagttttttacagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 41363801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 168 - 321
Target Start/End: Complemental strand, 24280174 - 24280018
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | | |||||||| ||||||||   ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24280174 aggctttgtttgggagtttcgaggggaagggaggggaaagctttggggatttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 24280075  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaaga 321  Q
    ||||||||||| |||||||||||||| |||   |||||||||||||| |||||||||    
T  24280074 agttttttagagaatgataaactaattcttatgattaatatacttttaattttaaga 24280018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 37756535 - 37756712
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttgggg----agttggaaatatatagaaaaatggacaaaaaattcatattttttga 261  Q
    ||||||||||||||| | | |||||||||| |||||||||| ||||||||     |||||||||||||| ||||||||||||||||||||  ||||||||    
T  37756535 taaggctttgtttggaagtttggaggggaagggaggggagggctttggggtggtggttggaaatatatacaaaaatggacaaaaaattcaatttttttga 37756634  T
Q  262 aagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||| |||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  37756635 aagaacagttctttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 37756712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 31530286 - 31530111
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattt----tttgaaa 263  Q
    |||||||||||| || | |||||||||| |||||||||| |||||||| |||  ||||||||||||||||||||||||||||||| |||    |||||||    
T  31530286 aggctttgtttgagagtttggaggggaagggaggggagggctttggggggttaaaaatatatagaaaaatggacaaaaaattcattttttttgtttgaaa 31530187  T
Q  264 gaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||||| ||||||||| ||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  31530186 gaacagttttttagagaatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacat 31530111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 191 - 329
Target Start/End: Complemental strand, 904437 - 904296
Alignment:
Q  191 gggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaact 290  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |||||||||||    
T  904437 gggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaataattcacattttttgaaagaatagttttttagagaatgataaact 904338  T
Q  291 aatactt---attaatatacttttgattttaagaatattata 329  Q
    |||||||   |||||||||||||| ||||||| |||||||||    
T  904337 aatacttatgattaatatacttttaattttaaaaatattata 904296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 16535956 - 16535783
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||| ||||||||||| | |||| ||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  16535956 taaggttttgtttgggagtttggatgggaagggaggggagggctttggggtattggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 16535857  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
     |  ||||||||| ||||||||||||||||||   ||||||||  |||| ||||||||||||||||||| ||||    
T  16535856 gctattttttagagaatgataaactaatacttataattaatatctttttaattttaagaatattataacaacat 16535783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 173 - 299
Target Start/End: Complemental strand, 13270241 - 13270115
Alignment:
Q  173 ttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttt 272  Q
    |||||||||| | ||||||| || ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13270241 ttgtttgggagtttggagggaaagggaggagagggctttggggggttggaaatatatagaaaaatggacaaaaaattcatatttttttaaagaacagttt 13270142  T
Q  273 tttagaaaatgataaactaatacttat 299  Q
    |||||| ||||||||||||||||||||    
T  13270141 tttagagaatgataaactaatacttat 13270115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 168 - 329
Target Start/End: Complemental strand, 38366289 - 38366126
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | ||||| |||| |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| |||    
T  38366289 aggctttgtttgggagtttggagaggaagggaggggagggctttgggg-gttggaaatatatagaaaaattgacaaaaaattcacattttttgaaaaaac 38366191  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattata 329  Q
    || |||||||| ||||||||||||||||||   ||||||||| |||| ||||||| |||||||||    
T  38366190 agatttttagagaatgataaactaatacttatgattaatatatttttaattttaaaaatattata 38366126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 49404470 - 49404612
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatact 296  Q
    ||||||||  ||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||    
T  49404470 ggaggggaaaactttggagggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaaaacagttttttagagaatgataaactattact 49404569  T
Q  297 t---attaatatacttttgattttaagaatattataactacat 336  Q
    |   |||||||||||||| ||||||||||||||||||| ||||    
T  49404570 tatgattaatatacttttaattttaagaatattataacaacat 49404612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 7182003 - 7182180
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggacttt----ggggagttggaaatatatagaaaaatggacaaaaaattcatattttttga 261  Q
    ||||| ||||||||||| | |||||||||| ||||||||||  | |    |||| |||  |||||||||||||||||||||||||||||| |||||||||    
T  7182003 taaggttttgtttgggagtttggaggggaagggaggggagggttatatatggggggttaaaaatatatagaaaaatggacaaaaaattcacattttttga 7182102  T
Q  262 aagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||  |||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  7182103 aagaatggttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 7182180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 186 - 336
Target Start/End: Original strand, 32948362 - 32948515
Alignment:
Q  186 tggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatg-a 284  Q
    |||||||||| ||||| |||   ||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |    
T  32948362 tggaggggaagggaggagagagttttggggggttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgaa 32948461  T
Q  285 taaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||| |||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  32948462 taatctaatacttatgattaatatactttt-attttaagaatattataacaacat 32948515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 166 - 297
Target Start/End: Complemental strand, 50643088 - 50642953
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttgggg----agttggaaatatatagaaaaatggacaaaaaattcatattttttga 261  Q
    |||| |||||||||||| | |||||||||| ||| |||||| ||||||||     |||||||||||||| |||||| ||||||||||||| |||||||||    
T  50643088 taagactttgtttgggagtttggaggggaagggatgggagggctttggggggtttgttggaaatatataaaaaaatagacaaaaaattcacattttttga 50642989  T
Q  262 aagaacagttttttagaaaatgataaactaatactt 297  Q
    ||||||||||||||||||||||||||||||||||||    
T  50642988 aagaacagttttttagaaaatgataaactaatactt 50642953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 238 - 337
Target Start/End: Original strand, 48830702 - 48830804
Alignment:
Q  238 ggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactac 334  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||    
T  48830702 ggacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaac 48830801  T
Q  335 att 337  Q
    |||    
T  48830802 att 48830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 171 - 336
Target Start/End: Original strand, 52594442 - 52594615
Alignment:
Q  171 ctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatg----gacaaaa--aattcatattttttgaaag 264  Q
    |||||||||||| | || |||||||||| |||||||||||| | | |||| ||||||||| |||||      |||||||  |||||||||||||||||||    
T  52594442 ctttgtttgggagtttgaaggggaaagggggggaggactttcgag-gttgaaaatatataaaaaaaaaaaaagacaaaaaaaattcatattttttgaaag 52594540  T
Q  265 aacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||| ||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  52594541 aacagtttcttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 52594615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 217 - 327
Target Start/End: Complemental strand, 22558990 - 22558878
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttga 313  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||| | || |||||||||||||||   |||||||||||||| |    
T  22558990 gttggaaatatatagaaaaatggataaaaaattcatatttttt-aaagaacagtttcttaaagaacgataaactaatacttatgattaatatacttttaa 22558892  T
Q  314 ttttaagaatatta 327  Q
    ||||||||||||||    
T  22558891 ttttaagaatatta 22558878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 222 - 336
Target Start/End: Complemental strand, 47670019 - 47669902
Alignment:
Q  222 aaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgatttta 318  Q
    |||||||||| ||||| ||||||||||||| |||||||||||||| |  |||||||| ||||||||||||||||||   |||||||||||||| ||||||    
T  47670019 aaatatatagtaaaattgacaaaaaattcacattttttgaaagaataaatttttagagaatgataaactaatacttatgattaatatacttttaatttta 47669920  T
Q  319 agaatattataactacat 336  Q
    ||||||||||||| ||||    
T  47669919 agaatattataacaacat 47669902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 216 - 336
Target Start/End: Original strand, 21730191 - 21730316
Alignment:
Q  216 agttggaaatatatagaaaaatggacaaaaaa-ttca-tattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttt 310  Q
    ||||||||||||||||||||||| | |||||| |||| | |||||| |||||||||||||||||| ||||||||||||||||||   ||||||||| |||    
T  21730191 agttggaaatatatagaaaaatgaataaaaaaattcacttttttttaaaagaacagttttttagagaatgataaactaatacttatgattaatatatttt 21730290  T
Q  311 tgattttaagaatattataactacat 336  Q
    | |||| |||||||||||||| ||||    
T  21730291 taatttcaagaatattataacaacat 21730316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 242 - 328
Target Start/End: Complemental strand, 23708325 - 23708236
Alignment:
Q  242 aaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattat 328  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  23708325 aaaaaattcacattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattat 23708236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 21295940 - 21296062
Alignment:
Q  172 tttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaacagt 270  Q
    ||||||||||| | |||||||||| |||||  |||  ||||||  |||||||||||||||||||||||| |||||| || | |||||||||||||||| |    
T  21295940 tttgtttgggagtttggaggggaagggaggttagggttttgggaggttggaaatatatagaaaaatggataaaaaattttacattttttgaaagaaca-t 21296038  T
Q  271 tttttagaaaatgataaactaata 294  Q
    |||||||| |||||||||||||||    
T  21296039 tttttagagaatgataaactaata 21296062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 166 - 257
Target Start/End: Complemental strand, 54806717 - 54806626
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatatttt 257  Q
    ||||| ||||||||||| | |||||| ||| ||||||||||||||||| | |||  |||||||||||||||||||  ||||||||| |||||    
T  54806717 taaggttttgtttgggagtttggaggagaagggaggggaggactttggagggttaaaaatatatagaaaaatggatcaaaaattcacatttt 54806626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 24662603 - 24662736
Alignment:
Q  206 gactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatacttat---taa 302  Q
    |||||||| | ||||||||||||||| |||||||  |||   |||| ||||| |||||||  | ||||||||| |||||||||  ||| |||||   |||    
T  24662603 gactttggagggttggaaatatataggaaaatggtaaaatctttcacattttctgaaagagtaattttttagagaatgataaatcaatgcttatgattaa 24662702  T
Q  303 tatacttttgattttaagaatattataactacat 336  Q
    |||  |||| ||||||| ||||||||||||||||    
T  24662703 tatttttttaattttaaaaatattataactacat 24662736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 254 - 334
Target Start/End: Complemental strand, 53013764 - 53013681
Alignment:
Q  254 ttttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactac 334  Q
    |||||||||| |||| ||||||||| ||||||||| ||||  ||||   ||||||| |||| ||||||| ||||||||||||||    
T  53013764 ttttttgaaaaaacaattttttagagaatgataaattaatgtttatgattaatatatttttaattttaacaatattataactac 53013681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 333
Target Start/End: Complemental strand, 39421976 - 39421910
Alignment:
Q  270 ttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataacta 333  Q
    |||||||||| |||| ||||||||||| ||   ||||||| |||| |||||||||||||||||||||    
T  39421976 ttttttagaatatgacaaactaatactcatgattaatatatttttaattttaagaatattataacta 39421910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 49936663 - 49936594
Alignment:
Q  270 ttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| ||||||||| |||| |||||   ||||||| |||| ||||||||||||||||||| ||||    
T  49936663 ttttttagagaatgataaattaatgcttatgattaatatatttttaattttaagaatattataacaacat 49936594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 13270083 - 13270045
Alignment:
Q  298 attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  13270083 attaatatacttttaattttaagaatattataacaacat 13270045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 51431105 - 51431041
Alignment:
Q  270 ttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataac 331  Q
    ||||||||| ||||||||| ||||| ||||   ||||||| |||| |||||||||||||||||||    
T  51431105 ttttttagagaatgataaagtaatatttatgattaatatatttttaattttaagaatattataac 51431041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 334
Target Start/End: Complemental strand, 9021179 - 9021028
Alignment:
Q  186 tggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgat 285  Q
    ||||| ||| |||| |||| |||||||  | ||||||||||||  | |||||||  |||   |||| ||||||| |||||  | |||||||||  |||||    
T  9021179 tggagcggagaggaagggaagactttgaagggttggaaatataggggaaaatggtaaaatctttcacattttttaaaagattaattttttagagtatgat 9021080  T
Q  286 aaactaatacttat---taatatacttttgattttaagaatattataactac 334  Q
    ||| |||| |||||   ||||||| |||| ||| ||||||||||||||||||    
T  9021079 aaattaatgcttatggttaatatattttttattctaagaatattataactac 9021028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 22845050 - 22845095
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttgg 213  Q
    ||||||||||||||| | |||||||||| |||||||||| ||||||    
T  22845050 aggctttgtttgggagtttggaggggaagggaggggagggctttgg 22845095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 336
Target Start/End: Original strand, 21296058 - 21296094
Alignment:
Q  300 taatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  21296058 taatatacttttaattttaagaatattataacaacat 21296094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 28880169 - 28880083
Alignment:
Q  253 attttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||||  | ||||||||| | ||||||| ||||  ||||   ||||||| |||| ||||||||||||||||||| ||||    
T  28880169 attttttgaaagagtatttttttagagagtgataaattaatgtttatgattaatatatttttaattttaagaatattataacaacat 28880083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 42759602 - 42759638
Alignment:
Q  298 attaatatacttttgattttaagaatattataactac 334  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  42759602 attaatatatttttaattttaagaatattataactac 42759638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 330
Target Start/End: Complemental strand, 42954738 - 42954706
Alignment:
Q  298 attaatatacttttgattttaagaatattataa 330  Q
    ||||||||| |||||||||||||||||||||||    
T  42954738 attaatatatttttgattttaagaatattataa 42954706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 297
Target Start/End: Original strand, 43929619 - 43929695
Alignment:
Q  221 gaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactt 297  Q
    |||||||| ||||||||| | ||| | |||||||||||||||||| || |||| |||| | | ||||| ||||||||    
T  43929619 gaaatataaagaaaaatgaaaaaatacttcatattttttgaaagagcaattttgtagagagtaataaattaatactt 43929695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 2e-53; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 33230864 - 33231036
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaa-tggacaaaaaattcatattttttgaaagaa 266  Q
    ||||||||||||||| | |||||||||| ||||| |||| ||||||||||||||||||||||| ||||| |||| |||||||||| ||||||||||||||    
T  33230864 aggctttgtttgggagtttggaggggaagggaggagagggctttggggagttggaaatatataaaaaaaatggataaaaaattcacattttttgaaagaa 33230963  T
Q  267 cagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  33230964 cagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 33231036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 176 - 336
Target Start/End: Complemental strand, 34272770 - 34272607
Alignment:
Q  176 tttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtttttt 275  Q
    ||||| ||| ||||||| || |||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||    
T  34272770 tttggaattttggagggaaagggaggggagggctttggggggttggaaatatatagaaaaatgggcaaaaaattcaaattttttgaaaaaacagtttttt 34272671  T
Q  276 agaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  34272670 agaaaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 34272607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 1941868 - 1942042
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| ||||||||||||||||| | ||| ||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  1941868 aggctttgtttgggagtttggaggggaagggaggggaggactttggagggtttgaaatttatagaaaaatggacaaaaaattcacatttgttgaaagaac 1941967  T
Q  268 agttttttagaaaatgataaactaata---cttat---taatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||| |||||||||||||||   |||||   |||||||||||| ||||||||||||||||||| ||||    
T  1941968 agttttttagagaatgataaactaataatacttatgattaatatacttttaattttaagaatattataacaacat 1942042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 176 - 336
Target Start/End: Original strand, 3404399 - 3404563
Alignment:
Q  176 tttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaacagttttt 274  Q
    ||||||| | |||||||||| |||||||||||||||| || ||||||||||||||||||||| || |||||| |||| ||||||||||||||||||||||    
T  3404399 tttgggagtttggaggggaagggaggggaggactttgaggggttggaaatatatagaaaaatagataaaaaaattcacattttttgaaagaacagttttt 3404498  T
Q  275 tagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  3404499 tagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 3404563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 172 - 336
Target Start/End: Complemental strand, 25033639 - 25033472
Alignment:
Q  172 tttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtt 271  Q
    ||||||||||| | |||||||||| |||||||||| | ||| ||  || ||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  25033639 tttgtttgggagtttggaggggaagggaggggagggcattgtgggattagaaatatatagaaaaatggacaaaaaattcacattttttcaaagaacagtt 25033540  T
Q  272 ttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  25033539 ttttagataatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 25033472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 36102706 - 36102879
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||| |   ||||||||  |||||||||  ||||||| |||| |||||||||||||||||||||||||||||| ||||||| ||| |    
T  36102706 taaggctttgtttgggagttaagaggggaagagaggggagggttttggggggttgaaaatatatagaaaaatggacaaaaaattcacatttttttaaaaa 36102805  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  36102806 acagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 36102879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 166 - 328
Target Start/End: Complemental strand, 36906454 - 36906287
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaa--aaaattcatattttttgaaa 263  Q
    ||||||||||||||||| | |||||||||| |||||||||| |||||||  |||||||||||||||||||||||||||  |||| ||| |||||||||||    
T  36906454 taaggctttgtttgggagtttggaggggaagggaggggagggctttgggaggttggaaatatatagaaaaatggacaaaaaaaaatcacattttttgaaa 36906355  T
Q  264 gaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattat 328  Q
    |||| |||||| ||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||    
T  36906354 gaacggtttttcagagaatgataaactaatacttatgattaatatacttttaattttaagaatattat 36906287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 13864910 - 13865081
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||  | | |||| |||||||||||||||| |||| | | |||||||||||||||| ||||| | |||||||||| |||||||||||||||    
T  13864910 aggctttgtttgaaagtttggatgggaaaggaggggagggctttagagggttggaaatatatagataaatgaataaaaaattcacattttttgaaagaac 13865009  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||||||||||| ||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  13865010 agttttttagaaaatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacat 13865081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 4734312 - 4734485
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||| ||||||||||| | |||||||||| |||| | | || ||| ||| |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  4734312 taaggttttgtttgggagtttggaggggaagggagtgaatgattttagggggttggaaatatagagaaaaatggacaaaaaattcacattttttgaaaga 4734411  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||| ||||||||||||||||||   |||||||||||||| |||||||||||  |||||| ||||    
T  4734412 acagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaattgtataacaacat 4734485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 166 - 330
Target Start/End: Original strand, 37659349 - 37659514
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    |||||||||||||| || | |||||||||| |||||||||| ||||||||  |||||||||||||||||||| | |||||| |||| | ||||||||| |    
T  37659349 taaggctttgtttgagaatttggaggggaagggaggggagggctttgggg--ttggaaatatatagaaaaataggcaaaaagttcacaatttttgaaata 37659446  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataa 330  Q
    ||||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||    
T  37659447 acagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataa 37659514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 166 - 330
Target Start/End: Original strand, 34148396 - 34148562
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaat-tcatattttttgaaag 264  Q
    ||||||||||||||||| | |||||||||| ||||||||||  ||||||| |||||||||||| ||||||||||||||||||  ||| ||||||||||||    
T  34148396 taaggctttgtttgggagtttggaggggaagggaggggagggttttgggg-gttggaaatataaagaaaaatggacaaaaaaaatcacattttttgaaag 34148494  T
Q  265 aacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataa 330  Q
    || ||||||||||| ||||||||||||| ||||   |||||||||||||| ||||||||||||||||||    
T  34148495 aatagttttttagagaatgataaactaa-acttatgattaatatacttttaattttaagaatattataa 34148562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 34349980 - 34349807
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaa-g 264  Q
    ||||| ||||||||||| | |||||||||| | |||||| | |||||| | ||||||||||||||||||| | ||||||||||||| ||||||| ||| |    
T  34349980 taaggttttgtttgggagtttggaggggaaggaaggggaaggctttggagggttggaaatatatagaaaa-tagacaaaaaattcacatttttttaaaag 34349882  T
Q  265 aacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  34349881 aacagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 34349807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 212 - 336
Target Start/End: Original strand, 2474629 - 2474756
Alignment:
Q  212 ggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatactta---ttaatatact 308  Q
    |||| |||| ||||||||||||||||||| ||||||||   ||||||||||| |||||||||||||| |||||||||||||||||||   ||||||||||    
T  2474629 ggggggttgaaaatatatagaaaaatggataaaaaatttgcattttttgaaaaaacagttttttagataatgataaactaatacttatggttaatatact 2474728  T
Q  309 tttgattttaagaatattataactacat 336  Q
    ||| ||||||||||||||||||| ||||    
T  2474729 tttaattttaagaatattataacaacat 2474756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 324
Target Start/End: Complemental strand, 7392 - 7289
Alignment:
Q  225 tatatagaaaaatggacaaaaaattcatatttttt-gaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaag 320  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||| ||||||||||||||||||   |||||||||||||| ||||||||    
T  7392 tatatagaaaaatagacaaaaaattcacatttttttgaaagaacagttatttagagaatgataaactaatacttataattaatatacttttaattttaag 7293  T
Q  321 aata 324  Q
    ||||    
T  7292 aata 7289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 248 - 336
Target Start/End: Original strand, 15108162 - 15108253
Alignment:
Q  248 ttcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||||||||| | ||||||||| ||||||||| ||| ||||   |||||||||||| | ||||||||||||||||||| ||||    
T  15108162 ttcatattttttgaaagaataattttttagagaatgataaattaacacttatgattaatatacttataattttaagaatattataacaacat 15108253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 7845 - 7778
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaa 233  Q
    |||||| |||||||||| | |||| ||||| |||||||||| |||||||| |||||||||||||||||    
T  7845 taaggcattgtttgggagtgtggaagggaagggaggggagggctttggggggttggaaatatatagaa 7778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 11961439 - 11961510
Alignment:
Q  268 agttttttagaaaatgataaactaatac---ttattaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||||||||||| ||||||   ||||||||||| |||| ||||| ||| ||||||||||||||    
T  11961439 agttttttagaaaatgataaattaatacttattattaatatatttttaattttcagagtattataactacat 11961510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 6839669 - 6839749
Alignment:
Q  220 ggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatacttatta 301  Q
    |||||||| ||||||||| || |||   |||||| |||| ||||||||| ||||| ||| ||||||||||||||||||||||    
T  6839669 ggaaatatgtagaaaaatagagaaatctttcatacttttcgaaagaacaattttt-agagaatgataaactaatacttatta 6839749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 31297268 - 31297331
Alignment:
Q  270 ttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataa 330  Q
    ||||||||| || |||||||||||| ||||   |||||||||||| ||||||||||||||||||    
T  31297268 ttttttagagaacgataaactaatatttatgattaatatacttttaattttaagaatattataa 31297331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 13537519 - 13537434
Alignment:
Q  254 ttttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||  | ||||||||| ||| ||||| |||| |||||   ||||||| |||| |||||||||||||||||| |||||    
T  13537519 ttttttgaaagagtaattttttagagaataataaattaatgcttatgattaatatatttttaattttaagaatattataattacat 13537434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 13627067 - 13626982
Alignment:
Q  254 ttttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||  | ||||||||| ||| ||||| |||| |||||   ||||||| |||| |||||||||||||||||| |||||    
T  13627067 ttttttgaaagagtaattttttagagaataataaattaatgcttatgattaatatatttttaattttaagaatattataattacat 13626982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 331
Target Start/End: Complemental strand, 38404523 - 38404438
Alignment:
Q  249 tcatattttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataac 331  Q
    ||||| ||||| |||||| |  ||||||||||||| |||| ||||| ||||   ||||||| |||| |||||||||||||||||||    
T  38404523 tcataattttttaaagaatatatttttagaaaatggtaaattaatatttatgattaatatattttttattttaagaatattataac 38404438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 10878689 - 10878771
Alignment:
Q  254 ttttttgaaagaacagttttttagaaaatgataaactaatacttattaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||||  | ||||||||| | ||||||| ||||  | ||||||||| |||| ||||||| ||||||||||| ||||    
T  10878689 ttttttgaaagagtatttttttagagagtgataaattaattatgattaatatatttttaattttaaaaatattataacaacat 10878771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 13406557 - 13406519
Alignment:
Q  298 attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  13406557 attaatatatttttgattttaagaatattataacaacat 13406519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 16424268 - 16424230
Alignment:
Q  298 attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  16424268 attaatatatttttaattttaagaatattataactacat 16424230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 336
Target Start/End: Original strand, 28517211 - 28517249
Alignment:
Q  298 attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  28517211 attaatatatttttaattttaagaatattataactacat 28517249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 31297234 - 31297272
Alignment:
Q  221 gaaatatatagaaaaatggacaaaaaattcatatttttt 259  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  31297234 gaaatatatagaaaaatggacaaaacattcacatttttt 31297272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 336
Target Start/End: Original strand, 43732991 - 43733109
Alignment:
Q  227 tatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatac---------ttattaatatacttttgatttt 317  Q
    |||||| ||||||| |||   |||| |||||||| |||| || ||||||||| ||||||||||||||||         | ||||||||| |||| |||||    
T  43732991 tatagagaaatggagaaatctttcacattttttggaagagcaattttttagataatgataaactaatactaatgcatgtgattaatatatttttaatttt 43733090  T
Q  318 aagaatattataactacat 336  Q
    |||||||||||||| ||||    
T  43733091 aagaatattataacaacat 43733109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 29612149 - 29612083
Alignment:
Q  273 tttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactacat 336  Q
    |||||| ||||||||| ||||||||||   ||||||| |||| ||||||| ||||||||||| ||||    
T  29612149 tttagacaatgataaattaatacttatgattaatatatttttaattttaataatattataacaacat 29612083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 2e-53; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 168 - 329
Target Start/End: Original strand, 25598587 - 25598751
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| ||||||||||||||||| | |||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  25598587 aggctttgtttgggagtttggaggggaagggaggggaggactttggcgggttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 25598686  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattata 329  Q
    ||||||||||| |||||||| |||||||||   |||||||||||||| ||||||| |||||||||    
T  25598687 agttttttagagaatgataagctaatacttatgattaatatacttttaattttaaaaatattata 25598751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 17093160 - 17092989
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| |||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17093160 aggctttgtttgggagtttggaggggaagggagggaaggtctttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 17093061  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |  |||||||| ||||||||||| ||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  17093060 aactttttagagaatgataaacttatacttatgattaatatacttttaattttaagaatattataacaacat 17092989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 167 - 336
Target Start/End: Complemental strand, 25027186 - 25027014
Alignment:
Q  167 aaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaa 266  Q
    |||| ||||||||||| | |||||||||| |||||||||| ||||| || ||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  25027186 aaggttttgtttgggagtttggaggggaagggaggggagggctttgaggggttggaaatatatagaaaaattgacaaaaaattcacattttttgaaagaa 25027087  T
Q  267 cagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
     | ||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  25027086 taattttttagagaatgataaactaatacttatcattaatatacttttaattttaagaatattataacaacat 25027014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 171 - 336
Target Start/End: Complemental strand, 35701663 - 35701495
Alignment:
Q  171 ctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagt 270  Q
    |||||||||||| | |||||||||  |||||||||| ||| | || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35701663 ctttgtttgggagtttggaggggacgggaggggagggcttcgaggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagt 35701564  T
Q  271 tttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||| ||||||||||||||||||   |||||||||||||  ||||||||||||||||||| ||||    
T  35701563 tttttagagaatgataaactaatacttatgattaatatactttaaattttaagaatattataacaacat 35701495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 166 - 330
Target Start/End: Original strand, 38302176 - 38302341
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||| ||||||||||| | |||||||||| |||||||||| |||||||  |||||||||||  |||||||||||||||||||||| |||||||||||||    
T  38302176 taaggttttgtttgggagtttggaggggaagggaggggagggctttgggaggttggaaatat--agaaaaatggacaaaaaattcacattttttgaaaga 38302273  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataa 330  Q
    ||||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||    
T  38302274 acagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataa 38302341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 166 - 330
Target Start/End: Complemental strand, 1658441 - 1658275
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    |||||||||||||| || | || ||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  1658441 taaggctttgtttgagagtttgaaggggaagggaggggagggttttgggg-gttggaaatatatagaaaaatggacaaaatattcacattttttgaaaga 1658343  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataa 330  Q
    ||||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||    
T  1658342 acagttttttagagaatgataaactaatacttataattaatatacttttaattttaagaatattataa 1658275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 168 - 331
Target Start/End: Complemental strand, 33718444 - 33718278
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| ||| | |||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  33718444 aggctttgtttgggagtttggaggggaagggatgagagggctttgtggggttggaaatatatagaaaaatggacaaaaaattcaaattttttaaaagaac 33718345  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataac 331  Q
    ||||||||||| ||||||||||||||||||   ||||||||| |||| |||||||||||||||||||    
T  33718344 agttttttagagaatgataaactaatacttatgattaatatatttttaattttaagaatattataac 33718278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 4648801 - 4648976
Alignment:
Q  168 aggctttgtttgggattctggaggggaaag----gaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaa 263  Q
    ||||||||||||||| | |||||||||| |    ||||||||| ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||    
T  4648801 aggctttgtttgggagtttggaggggaaggaagggaggggagggctttgaggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 4648900  T
Q  264 gaacagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||| ||||||||| ||||||||||||||||||   |||||||||||||| |||||||||||| |||||| ||||    
T  4648901 gaacaattttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatactataacaacat 4648976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 10295749 - 10295575
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggac-aaaaaattcatattttttgaaagaa 266  Q
    ||||||||||||||| | |||||||||| |||||||||| |||||||| |||| |||||||||||||||| ||| |||||||||| ||||||||||||||    
T  10295749 aggctttgtttgggagtttggaggggaagggaggggagggctttggggggttgaaaatatatagaaaaatagacaaaaaaattcacattttttgaaagaa 10295650  T
Q  267 cagttttttagaaaatgataaactaatactt-----attaatatacttttgattttaagaatattataactacat 336  Q
     |||||| |||| ||||||||||||||||||     |||||||||||||| ||||||||||||||||||| ||||    
T  10295649 tagttttgtagagaatgataaactaatacttatatgattaatatacttttaattttaagaatattataacaacat 10295575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 166 - 330
Target Start/End: Complemental strand, 35869094 - 35868928
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||| ||||||||||| |  ||||||||  ||||  ||||| ||||| | || |||||||||||||||||||||||||||||||| |||||||||||||    
T  35869094 taaggttttgtttgggagttcggaggggag-ggagatgaggattttggagggtcggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 35868996  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataa 330  Q
    | ||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||    
T  35868995 atagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataa 35868928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 172 - 336
Target Start/End: Original strand, 27479989 - 27480161
Alignment:
Q  172 tttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatata------gaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    |||||||| || | |||||||||| ||||||||||||||||||  ||||||||||||||      ||||||||||||||||| ||| ||||| |||||||    
T  27479989 tttgtttgagagtttggaggggaagggaggggaggactttgggaggttggaaatatatatatatagaaaaatggacaaaaaaatcacatttt-tgaaaga 27480087  T
Q  266 acagttttttagaaaatgataaactaatac---ttattaatatacttttgattttaagaatattataactacat 336  Q
    ||| ||||||||| ||||||||||||||||   | |||||||||||||| ||||||||||||||||||| ||||    
T  27480088 acaattttttagagaatgataaactaatacatatgattaatatacttttaattttaagaatattataacaacat 27480161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 2021214 - 2021072
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaa-tggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatac 295  Q
    |||||||||| |||||||| |||||||||||||| ||||| | || |||||||||||||| |||||||||||||||||||||| ||||||||| |||||     
T  2021214 ggaggggagggctttgggg-gttggaaatatataaaaaaaattgataaaaaattcatattgtttgaaagaacagttttttagagaatgataaattaatat 2021116  T
Q  296 tt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||   |||||||||||||| ||||||||||||||||||| ||||    
T  2021115 ttatgattaatatacttttaattttaagaatattataacaacat 2021072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 209 - 336
Target Start/End: Complemental strand, 26149826 - 26149695
Alignment:
Q  209 tttggggagttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaacagttttttagaaaatgataaactaatactt---attaata 304  Q
    ||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||  ||||||||||| ||||||||||||||| ||   ||| |||    
T  26149826 tttggggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagattagttttttagagaatgataaactaatatttatgattgata 26149727  T
Q  305 tacttttgattttaagaatattataactacat 336  Q
    ||||||| ||||||||||||||||||| ||||    
T  26149726 tacttttaattttaagaatattataacaacat 26149695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 213 - 330
Target Start/End: Complemental strand, 32760976 - 32760854
Alignment:
Q  213 gggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaaca--gttttttagaaaatgataaactaatactt---attaatatac 307  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |   ||||||||| ||||||||||||||||||   ||||||||||    
T  32760976 gggagttggaaatatatagaaaattggacaaaaaattcacattttttgaaagaatatttttttttagagaatgataaactaatacttatgattaatatac 32760877  T
Q  308 ttttgattttaagaatattataa 330  Q
    |||| ||||||||||||||||||    
T  32760876 ttttaattttaagaatattataa 32760854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 209 - 329
Target Start/End: Complemental strand, 41638591 - 41638470
Alignment:
Q  209 tttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatacttattaatatact 308  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | ||||||||||||||| ||| | |||||||    
T  41638591 tttggggggttggaaatatatagaaaaatggacaaaaaattcacatttttttaaagaacagttttttaaagaatgataaactaatagtta-tgatatact 41638493  T
Q  309 ttt--gattttaagaatattata 329  Q
    |||   |||||||||||||||||    
T  41638492 ttttaaattttaagaatattata 41638470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 38120013 - 38120158
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| |||||||||  |||||||| ||||||||||||||||||||||||||||| ||||| ||||    ||| |||    
T  38120013 aggctttgtttgggagtttggaggggaagggaggggagagctttggggggttggaaatatatagaaaaatggacaaaatattcacatttaaaaaaaaaac 38120112  T
Q  268 agttttttagaaaatgataaactaatactt---attaatatactttt 311  Q
    |||||||||| |||||||||||||||| ||   ||||||||||||||    
T  38120113 agttttttag-aaatgataaactaataattatgattaatatactttt 38120158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 37508225 - 37508309
Alignment:
Q  217 gttggaaatatatagaaaaatggacaaaaaattcata-ttttttgaaagaacagttttttagaaaatgataaactaatacttatt 300  Q
    ||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| ||| |||||||| ||||||||    
T  37508225 gttggaaatatatagaaaaatggacaaaaaattcacattttttttaaagaacagttttttagagaataataaactagtacttatt 37508309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 334
Target Start/End: Original strand, 9684609 - 9684778
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 267  Q
    ||||||||||||||| | |||||||||| ||| |||| | ||| || | ||||||||||||  | |||||||  |||   | || |||||||||||||      
T  9684609 aggctttgtttgggagtttggaggggaagggaagggaaggcttaggagggttggaaatataggggaaaatgggaaaatcttccacattttttgaaagagt 9684708  T
Q  268 agttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactac 334  Q
    | ||||||||||||||||||| |||| |||||   ||||||| |||| ||||||||||||||||||||||    
T  9684709 aattttttagaaaatgataaattaatgcttatgattaatatatttttaattttaagaatattataactac 9684778  T

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Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 41695138 - 41695069
Alignment:
Q  270 ttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| ||||||||| ||||||||||   |||||||||||||||||||| ||||||||||| ||||    
T  41695138 ttttttagagaatgataaattaatacttatgattaatatacttttgattttaaaaatattataacaacat 41695069  T

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Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 19389675 - 19389817
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatact 296  Q
    |||||||| | |||||| | ||||||||||| | | |||||||  |||   |||| | |||||||||||  | ||||||||| ||||||||| |||| ||    
T  19389675 ggaggggaaggctttggagggttggaaatatgtgggaaaatggtaaaatctttcacaatttttgaaagattaattttttagagaatgataaattaatgct 19389774  T
Q  297 tat---taatatacttttgattttaagaatattataactacat 336  Q
    |||   ||||||| |||| ||||||| ||||||||||||||||    
T  19389775 tatgattaatatatttttaattttaaaaatattataactacat 19389817  T

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Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 248 - 336
Target Start/End: Original strand, 17668032 - 17668123
Alignment:
Q  248 ttcatattttttgaaagaacagttttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactacat 336  Q
    |||| |||||||||||||  | ||||||||  ||||||||| |||| |||||   ||||||| |||  ||||||||||||||||||||||||    
T  17668032 ttcacattttttgaaagagtaattttttagggaatgataaattaatgcttatgcttaatatattttcaattttaagaatattataactacat 17668123  T

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Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 37508311 - 37508379
Alignment:
Q  270 ttttttagaaaatgataaactaatacttat--taatatacttttgattttaagaatattataactacat 336  Q
    |||||| || || |||||||||||||||||  |||||||||||| ||||||| ||||||||||| ||||    
T  37508311 tttttttgacaaggataaactaatacttatattaatatacttttaattttaaaaatattataacaacat 37508379  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 6044694 - 6044625
Alignment:
Q  270 ttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| ||||||||||||||||||   ||| ||||| |||| || |||||||||||||||| ||||    
T  6044694 ttttttagagaatgataaactaatacttatcattcatatatttttaatattaagaatattataacaacat 6044625  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 336
Target Start/End: Original strand, 35704968 - 35705035
Alignment:
Q  272 ttttagaaaatgataaactaatacttat---taatatacttttgattttaagaatattataactacat 336  Q
    ||||||||||| ||||| |||| |||||   ||||||| |||| ||||||||||||||||||| ||||    
T  35704968 ttttagaaaatcataaattaatgcttatgattaatatatttttaattttaagaatattataacaacat 35705035  T

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Target: scaffold0636 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 166 - 336
Target Start/End: Complemental strand, 8656 - 8483
Alignment:
Q  166 taaggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaaga 265  Q
    ||||||||||||||||  | ||||||||||  ||||||||| ||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||    
T  8656 taaggctttgtttgggggtttggaggggaagagaggggagggctttgaggggttggaaatatatacaaaaatggacaaaaaattcacattttttgaaaga 8557  T
Q  266 acagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||| ||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  8556 acaattttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 8483  T

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Target: scaffold1562 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 171 - 336
Target Start/End: Complemental strand, 400 - 232
Alignment:
Q  171 ctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaacag 269  Q
    ||||||||| || | |||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||     
T  400 ctttgtttgagagtttggaggggaagggaggggagggctttgggg-gttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacaa 302  T
Q  270 ttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  301 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 232  T

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Target: scaffold1158 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 171 - 336
Target Start/End: Original strand, 2193 - 2361
Alignment:
Q  171 ctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaa-ttcatattttttgaaagaacag 269  Q
    ||||||||| || | |||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||     
T  2193 ctttgtttgagagtttggaggggaagggaggggagggctttgggg-gttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacaa 2291  T
Q  270 ttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  2292 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 2361  T

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Target: scaffold0952 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 168 - 336
Target Start/End: Original strand, 3487 - 3659
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggac-aaaaaattcatattttttgaaagaa 266  Q
    ||||||||||||||| | ||||||||||  || |||||| |||||||| ||||| ||||||||||||||||||| |||||||||| ||||||||||| ||    
T  3487 aggctttgtttgggagtttggaggggaagagatgggagggctttggggggttggcaatatatagaaaaatggacaaaaaaattcacattttttgaaataa 3586  T
Q  267 cagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    |||||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||    
T  3587 cagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacat 3659  T

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Target: scaffold0717 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 168 - 336
Target Start/End: Complemental strand, 1842 - 1670
Alignment:
Q  168 aggctttgtttgggattctggaggggaaaggaggggaggactttggggagttggaaatatatagaaaaatggac-aaaaaattcatattttttgaaagaa 266  Q
    |||||||||||| || | |||||||||| |||||||||| |||||||| |||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  1842 aggctttgtttgagagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaaaggacaaaaaaattcacattttttgaaagaa 1743  T
Q  267 cagttttttagaaaatgataaactaatactt---attaatatacttttgattttaagaatattataactacat 336  Q
    || ||||||||| ||||||||||||||||||   ||||||||| |||| ||||||||||||||||||| ||||    
T  1742 caattttttagagaatgataaactaatacttatgattaatatatttttaattttaagaatattataacaacat 1670  T

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Target: scaffold0059 (Bit Score: 81; Significance: 7e-38; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 197 - 297
Target Start/End: Complemental strand, 68000 - 67901
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatact 296  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  68000 ggaggggagggctttgggg-gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatact 67902  T

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Target: scaffold0059; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 197 - 297
Target Start/End: Complemental strand, 76105 - 76006
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatact 296  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  76105 ggaggggagggctttgggg-gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatact 76007  T

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Target: scaffold0013 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 197 - 297
Target Start/End: Original strand, 107657 - 107756
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatact 296  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  107657 ggagggaagggctttgggg-gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacagttttttagagaatgataaactaatact 107755  T

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Target: scaffold0623 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 275
Target Start/End: Complemental strand, 682 - 604
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtttttt 275  Q
    |||||||||| ||||| ||  |||||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||    
T  682 ggaggggaggtctttgagggattggaaatatatggaaaaatagacaaaaaattcacattttttaaaagaacagtttttt 604  T

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Target: scaffold0459 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 275
Target Start/End: Complemental strand, 10319 - 10241
Alignment:
Q  197 ggaggggaggactttggggagttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagtttttt 275  Q
    |||||||||| ||||| ||  |||||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||    
T  10319 ggaggggaggtctttgagggattggaaatatatggaaaaatagacaaaaaattcacattttttaaaagaacagtttttt 10241  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 4489 - 4409
Alignment:
Q  219 tggaaatatatagaaaaatggacaaaaaattcatattttttgaaagaacagttttttagaaaatgataaactaatacttat 299  Q
    ||||||||||||||||||| || |||  ||||| ||| |||||||||||   |||||||| ||||||||| |||| |||||    
T  4489 tggaaatatatagaaaaatagaaaaatcattcacattctttgaaagaaccactttttagagaatgataaattaatgcttat 4409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1763 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1763
Description:

Target: scaffold1763; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 336
Target Start/End: Original strand, 555 - 593
Alignment:
Q  298 attaatatacttttgattttaagaatattataactacat 336  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  555 attaatatatttttaattttaagaatattataactacat 593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0648 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0648
Description:

Target: scaffold0648; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 331
Target Start/End: Original strand, 7338 - 7424
Alignment:
Q  248 ttcatattttttgaaagaacagttttttagaaaatgataaactaatacttattaata---tacttttgattttaagaatattataac 331  Q
    |||| ||||||| |||||| ||||||||||  |||| |||| |||||||||| ||||   || |||| ||||||| |||||||||||    
T  7338 ttcacattttttaaaagaatagttttttagcgaatggtaaattaatacttatgaataacatatttttaattttaaaaatattataac 7424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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