View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0275_high_2 (Length: 325)
Name: NF0275_high_2
Description: NF0275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0275_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 37 - 312
Target Start/End: Original strand, 14037824 - 14038098
Alignment:
| Q |
37 |
atcaatccatggaggaaaatgggttacacaagcgtcaaactcattcgcttcgtccattacaagtgtgtacgcttatttttctcgtcacttttacgtttca |
136 |
Q |
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||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
14037824 |
atcaatccatggaggaaaatgggctatccaagcgtcaaactcattcgcttcgtccattacaagtgtgtacgcttatttttctcgtcacttt-acgtttca |
14037922 |
T |
|
| Q |
137 |
tttcataattttgttatttatatcatttaacttatgatcgagaaaagtctctctgatacatgttaaatgatatcaatagatgtctcaattatagtcttat |
236 |
Q |
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||||||||||||| |||| |||||||||||||||| | ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
14037923 |
tttcataattttgctattgatatcatttaacttattagtgaggaaagtctctctgatacacgttaaatgatatcaatagatgtctcaattatagtcttat |
14038022 |
T |
|
| Q |
237 |
ataaatataaattttgaagtatttatttacaaaattactttgttagggtgactacaaacattggctagtgcaacag |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
14038023 |
ataaatataaattttgaagtatttatttacaaaattactttgttagggtgactacaaacattggctagtggaacag |
14038098 |
T |
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