View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0277_high_2 (Length: 328)
Name: NF0277_high_2
Description: NF0277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0277_high_2 |
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Alignment Details
Target: chr5 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 14927898 - 14928219
Alignment:
| Q |
1 |
tataccaggtcagccatacagtgaagtacctgataaatttttgacctattcttattttggtgacactatttctgataggtagagagaatttaatatttgt |
100 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14927898 |
tataccaggtcagccatacagtgaagtaactgataaatttttgacctattcttattttggtgacactatttctgataggtagagagaatttaatatttgt |
14927997 |
T |
|
| Q |
101 |
gcagacagtaatgataatacataaataccatgtgctgacaaattgacacaaacatttactccattttgtagttatgcaatgaattttctgttccaaagga |
200 |
Q |
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||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14927998 |
gcaaacagtaatgata-tacataaataccatgtgctgacaaattgacacaaacatttactccattttgtagttatgcaatgaattttctgttccaaagga |
14928096 |
T |
|
| Q |
201 |
aaaactagacaacttcaaaagcatcacaccccaagacattgtttgttcccaggttgaaaaaactatagtaataagtgtccttttcattcagtatatgtac |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
14928097 |
aaaactagacaacttcaaaagcatcacaccccaagacattgtctgttcccaggttgaaaaaactatagtaataagtgtccttttcattcagcatatgtac |
14928196 |
T |
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| Q |
301 |
atgcctgcctatcttcttttctg |
323 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
14928197 |
atgcctgcctatcttcttttctg |
14928219 |
T |
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