View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0278_high_6 (Length: 295)

Name: NF0278_high_6
Description: NF0278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0278_high_6
NF0278_high_6
[»] chr2 (37 HSPs)
chr2 (86-295)||(2544360-2544566)
chr2 (108-223)||(5559461-5559576)
chr2 (79-207)||(15119779-15119908)
chr2 (81-224)||(23143478-23143622)
chr2 (81-224)||(23555268-23555412)
chr2 (81-212)||(11726500-11726631)
chr2 (81-223)||(15119770-15119913)
chr2 (86-207)||(11726505-11726626)
chr2 (73-221)||(23143482-23143631)
chr2 (73-221)||(23555272-23555421)
chr2 (108-207)||(31024180-31024279)
chr2 (86-207)||(1961318-1961440)
chr2 (86-207)||(25270865-25270987)
chr2 (81-217)||(38465793-38465930)
chr2 (73-160)||(7650186-7650274)
chr2 (81-184)||(31024175-31024279)
chr2 (109-185)||(35498155-35498230)
chr2 (108-207)||(2544360-2544459)
chr2 (81-207)||(25270865-25270992)
chr2 (86-207)||(41056897-41057019)
chr2 (147-207)||(1961380-1961440)
chr2 (88-207)||(3098137-3098257)
chr2 (86-201)||(37182831-37182947)
chr2 (94-207)||(37182833-37182947)
chr2 (108-225)||(26003467-26003584)
chr2 (94-205)||(19268077-19268189)
chr2 (154-221)||(7650185-7650252)
chr2 (81-207)||(13333456-13333583)
chr2 (88-210)||(38181771-38181894)
chr2 (108-207)||(38465798-38465897)
chr2 (94-203)||(5559442-5559552)
chr2 (157-203)||(21183408-21183454)
chr2 (108-214)||(32630408-32630514)
chr2 (108-212)||(8740523-8740627)
chr2 (108-184)||(12242272-12242348)
chr2 (108-184)||(20057138-20057214)
chr2 (157-205)||(38181771-38181819)
[»] chr5 (38 HSPs)
chr5 (79-220)||(25694117-25694259)
chr5 (81-210)||(25694121-25694251)
chr5 (108-222)||(13391563-13391677)
chr5 (81-223)||(7613362-7613505)
chr5 (94-207)||(13391540-13391654)
chr5 (108-207)||(7613367-7613466)
chr5 (86-207)||(3100414-3100536)
chr5 (108-228)||(27314463-27314583)
chr5 (108-184)||(27314507-27314583)
chr5 (108-203)||(1100070-1100165)
chr5 (108-207)||(3100414-3100513)
chr5 (81-207)||(13654518-13654644)
chr5 (108-207)||(17625672-17625771)
chr5 (140-207)||(22227045-22227112)
chr5 (76-166)||(25773242-25773333)
chr5 (108-207)||(33075097-33075196)
chr5 (86-207)||(17625650-17625771)
chr5 (132-221)||(4739612-4739700)
chr5 (108-207)||(1996879-1996979)
chr5 (108-216)||(20518203-20518311)
chr5 (108-212)||(27895929-27896032)
chr5 (108-207)||(13654541-13654639)
chr5 (157-212)||(18652846-18652901)
chr5 (157-207)||(25792927-25792977)
chr5 (108-166)||(32911502-32911560)
chr5 (157-207)||(43506175-43506225)
chr5 (108-205)||(1100089-1100186)
chr5 (114-207)||(11795745-11795838)
chr5 (108-185)||(16899718-16899795)
chr5 (155-207)||(32911571-32911624)
chr5 (157-210)||(37067618-37067671)
chr5 (81-207)||(40100096-40100223)
chr5 (81-207)||(71263-71392)
chr5 (88-168)||(4349121-4349201)
chr5 (159-207)||(14772557-14772605)
chr5 (108-207)||(25772163-25772263)
chr5 (154-202)||(25773257-25773305)
chr5 (126-205)||(32911480-32911560)
[»] chr1 (48 HSPs)
chr1 (88-209)||(28038838-28038960)
chr1 (86-205)||(28038838-28038958)
chr1 (73-207)||(50308624-50308759)
chr1 (86-207)||(14967234-14967356)
chr1 (86-207)||(24981850-24981972)
chr1 (81-221)||(9675970-9676111)
chr1 (108-223)||(41007709-41007824)
chr1 (81-207)||(24981850-24981977)
chr1 (86-207)||(50308637-50308759)
chr1 (108-205)||(29043465-29043562)
chr1 (88-214)||(3549781-3549908)
chr1 (81-207)||(5431345-5431471)
chr1 (94-207)||(14967242-14967356)
chr1 (108-185)||(11989341-11989418)
chr1 (88-196)||(29043465-29043574)
chr1 (108-188)||(15290606-15290686)
chr1 (115-207)||(15290617-15290709)
chr1 (86-217)||(34953895-34954027)
chr1 (108-207)||(2122602-2122700)
chr1 (108-223)||(38834604-38834719)
chr1 (108-207)||(48083513-48083612)
chr1 (153-207)||(6156643-6156697)
chr1 (86-207)||(34953905-34954027)
chr1 (94-207)||(46906870-46906984)
chr1 (157-222)||(19175669-19175734)
chr1 (87-203)||(25554553-25554670)
chr1 (86-202)||(41007691-41007808)
chr1 (108-207)||(29302073-29302173)
chr1 (157-220)||(1409130-1409193)
chr1 (81-135)||(3013691-3013746)
chr1 (73-223)||(9675959-9676110)
chr1 (81-135)||(23398423-23398478)
chr1 (157-207)||(3013691-3013741)
chr1 (157-207)||(23398428-23398478)
chr1 (108-185)||(47718-47795)
chr1 (108-217)||(1602850-1602958)
chr1 (146-207)||(10256790-10256851)
chr1 (108-185)||(16426940-16427017)
chr1 (147-204)||(33765858-33765915)
chr1 (147-204)||(35544545-35544602)
chr1 (108-205)||(42761464-42761561)
chr1 (78-130)||(43738606-43738659)
chr1 (94-187)||(45925273-45925366)
chr1 (86-130)||(46412712-46412757)
chr1 (157-221)||(12750563-12750627)
chr1 (157-221)||(42660352-42660416)
chr1 (108-168)||(44939118-44939178)
chr1 (108-168)||(50155350-50155410)
[»] chr8 (33 HSPs)
chr8 (88-223)||(17871774-17871910)
chr8 (86-205)||(17871774-17871894)
chr8 (86-207)||(5888345-5888467)
chr8 (115-207)||(17986233-17986325)
chr8 (97-207)||(11295673-11295784)
chr8 (108-205)||(7484649-7484746)
chr8 (108-216)||(7428892-7429000)
chr8 (86-205)||(17986205-17986325)
chr8 (88-207)||(26998678-26998798)
chr8 (86-207)||(5888345-5888467)
chr8 (108-205)||(2627206-2627303)
chr8 (124-205)||(6189682-6189763)
chr8 (88-184)||(7484649-7484746)
chr8 (86-205)||(27502910-27503030)
chr8 (108-207)||(13964428-13964527)
chr8 (77-223)||(26998669-26998816)
chr8 (108-207)||(33070197-33070296)
chr8 (157-207)||(10934684-10934734)
chr8 (73-138)||(13841844-13841910)
chr8 (95-207)||(2627183-2627296)
chr8 (88-168)||(6189682-6189763)
chr8 (88-207)||(31271543-31271663)
chr8 (87-162)||(8688366-8688441)
chr8 (81-135)||(10934684-10934739)
chr8 (81-207)||(24820307-24820433)
chr8 (155-221)||(13841843-13841909)
chr8 (86-207)||(24017727-24017849)
chr8 (157-207)||(27502910-27502960)
chr8 (108-185)||(9878946-9879023)
chr8 (157-210)||(11335573-11335626)
chr8 (175-227)||(2116660-2116712)
chr8 (86-209)||(24017725-24017849)
chr8 (147-207)||(41753767-41753827)
[»] chr7 (37 HSPs)
chr7 (79-210)||(28752085-28752217)
chr7 (88-216)||(28752090-28752219)
chr7 (81-207)||(10422817-10422944)
chr7 (86-216)||(31115618-31115749)
chr7 (81-199)||(43813129-43813248)
chr7 (88-201)||(29168374-29168488)
chr7 (86-207)||(7701197-7701319)
chr7 (90-207)||(43813134-43813252)
chr7 (81-207)||(7701192-7701319)
chr7 (81-207)||(10422812-10422939)
chr7 (81-217)||(2943211-2943348)
chr7 (81-205)||(8169108-8169232)
chr7 (143-207)||(34478302-34478366)
chr7 (108-207)||(8571414-8571513)
chr7 (81-135)||(10095723-10095778)
chr7 (148-207)||(10095728-10095787)
chr7 (157-212)||(23818428-23818483)
chr7 (86-148)||(23818433-23818496)
chr7 (157-224)||(25245224-25245291)
chr7 (108-210)||(8169129-8169230)
chr7 (79-184)||(23797350-23797456)
chr7 (77-214)||(25774182-25774320)
chr7 (108-185)||(2360481-2360558)
chr7 (79-135)||(2943214-2943271)
chr7 (81-136)||(26824910-26824966)
chr7 (108-208)||(30138796-30138896)
chr7 (81-135)||(5950275-5950330)
chr7 (108-207)||(8595179-8595278)
chr7 (81-207)||(12274818-12274945)
chr7 (81-135)||(25245224-25245279)
chr7 (81-135)||(41404019-41404074)
chr7 (157-207)||(5950275-5950325)
chr7 (155-221)||(8127906-8127972)
chr7 (86-207)||(12274818-12274940)
chr7 (157-207)||(41404024-41404074)
chr7 (94-187)||(25486734-25486827)
chr7 (108-168)||(32549869-32549929)
[»] scaffold0065 (3 HSPs)
scaffold0065 (108-210)||(36886-36988)
scaffold0065 (88-195)||(36875-36983)
scaffold0065 (147-205)||(39180-39238)
[»] chr3 (43 HSPs)
chr3 (81-207)||(331808-331934)
chr3 (144-224)||(39579561-39579641)
chr3 (86-207)||(7823876-7823998)
chr3 (88-205)||(29241491-29241609)
chr3 (81-207)||(54595799-54595925)
chr3 (79-207)||(12744910-12745039)
chr3 (108-217)||(40470417-40470526)
chr3 (76-207)||(54595789-54595920)
chr3 (81-207)||(27224589-27224716)
chr3 (86-207)||(7823876-7823998)
chr3 (81-217)||(12744905-12745042)
chr3 (88-207)||(37897693-37897813)
chr3 (97-207)||(52866423-52866537)
chr3 (79-185)||(40470420-40470527)
chr3 (147-210)||(41743596-41743659)
chr3 (81-207)||(52215884-52216011)
chr3 (81-207)||(331803-331929)
chr3 (86-207)||(21217175-21217297)
chr3 (81-210)||(27224584-27224714)
chr3 (147-223)||(24722680-24722756)
chr3 (108-184)||(36344405-36344481)
chr3 (88-207)||(41253940-41254060)
chr3 (148-223)||(22496944-22497019)
chr3 (86-207)||(10872681-10872803)
chr3 (81-135)||(7882285-7882340)
chr3 (148-207)||(40639781-40639840)
chr3 (81-135)||(40639790-40639845)
chr3 (81-135)||(48191719-48191774)
chr3 (157-207)||(7882290-7882340)
chr3 (81-222)||(10872666-10872808)
chr3 (86-135)||(22496960-22497010)
chr3 (157-207)||(30519679-30519729)
chr3 (86-207)||(41743599-41743721)
chr3 (157-207)||(48191724-48191774)
chr3 (158-207)||(9170121-9170170)
chr3 (114-207)||(44382850-44382943)
chr3 (146-222)||(2128431-2128507)
chr3 (157-205)||(23444354-23444402)
chr3 (96-135)||(23444354-23444394)
chr3 (157-205)||(34327589-34327637)
chr3 (88-135)||(34327589-34327637)
chr3 (86-205)||(37897693-37897813)
chr3 (147-207)||(40639866-40639926)
[»] chr4 (56 HSPs)
chr4 (94-207)||(52914015-52914129)
chr4 (94-205)||(39533773-39533885)
chr4 (86-207)||(52914007-52914129)
chr4 (88-195)||(2401051-2401159)
chr4 (98-205)||(2401051-2401159)
chr4 (81-207)||(38381980-38382107)
chr4 (86-207)||(38381985-38382107)
chr4 (79-168)||(46518468-46518558)
chr4 (81-207)||(55935992-55936118)
chr4 (86-225)||(19934629-19934769)
chr4 (76-207)||(29006834-29006966)
chr4 (76-207)||(55935997-55936128)
chr4 (81-207)||(54164822-54164949)
chr4 (86-207)||(34616224-34616346)
chr4 (108-185)||(28702092-28702169)
chr4 (88-200)||(39533772-39533885)
chr4 (87-207)||(47181568-47181689)
chr4 (87-207)||(48402421-48402542)
chr4 (86-206)||(48402421-48402542)
chr4 (87-207)||(56364336-56364457)
chr4 (108-207)||(34616247-34616346)
chr4 (108-222)||(4386317-4386430)
chr4 (86-223)||(11796578-11796715)
chr4 (113-207)||(18488557-18488651)
chr4 (81-206)||(47181563-47181689)
chr4 (108-206)||(56364336-56364434)
chr4 (86-135)||(18626718-18626766)
chr4 (108-185)||(21859513-21859590)
chr4 (108-185)||(21915376-21915453)
chr4 (108-185)||(25700489-25700566)
chr4 (88-207)||(2582819-2582939)
chr4 (76-215)||(4406240-4406380)
chr4 (108-168)||(21586966-21587026)
chr4 (108-148)||(50371145-50371185)
chr4 (88-135)||(54931900-54931948)
chr4 (81-184)||(21224690-21224793)
chr4 (81-135)||(23568461-23568516)
chr4 (86-212)||(53176317-53176444)
chr4 (157-223)||(14061488-14061554)
chr4 (94-207)||(14450966-14451080)
chr4 (157-207)||(23568461-23568511)
chr4 (108-205)||(2253965-2254061)
chr4 (155-212)||(21142094-21142151)
chr4 (86-166)||(21142099-21142180)
chr4 (157-202)||(23003976-23004021)
chr4 (95-207)||(24941120-24941233)
chr4 (164-213)||(32588107-32588156)
chr4 (108-225)||(36072561-36072678)
chr4 (87-207)||(36786160-36786281)
chr4 (86-222)||(37255676-37255812)
chr4 (147-207)||(4406250-4406310)
chr4 (94-166)||(15641273-15641345)
chr4 (147-207)||(19878295-19878355)
chr4 (79-130)||(40814755-40814807)
chr4 (147-207)||(40952357-40952417)
chr4 (155-207)||(43616224-43616276)
[»] chr6 (28 HSPs)
chr6 (86-221)||(16120960-16121096)
chr6 (81-207)||(32254825-32254952)
chr6 (81-207)||(34379740-34379866)
chr6 (81-205)||(15517095-15517219)
chr6 (76-207)||(34379745-34379876)
chr6 (86-207)||(26527199-26527321)
chr6 (86-207)||(26527199-26527321)
chr6 (86-207)||(32254830-32254952)
chr6 (86-222)||(14173399-14173535)
chr6 (86-222)||(14177935-14178071)
chr6 (79-207)||(16120967-16121096)
chr6 (108-207)||(13462965-13463063)
chr6 (86-223)||(3203664-3203802)
chr6 (81-224)||(3203675-3203819)
chr6 (88-207)||(15517100-15517219)
chr6 (110-207)||(14173399-14173496)
chr6 (110-207)||(14177935-14178032)
chr6 (147-223)||(18886301-18886377)
chr6 (81-204)||(31996511-31996635)
chr6 (143-207)||(34170087-34170151)
chr6 (147-209)||(4329683-4329745)
chr6 (88-212)||(10258308-10258433)
chr6 (157-210)||(12480078-12480131)
chr6 (86-130)||(18886317-18886362)
chr6 (152-205)||(29419863-29419916)
chr6 (86-207)||(33689238-33689359)
chr6 (161-209)||(12218452-12218500)
chr6 (81-208)||(13281538-13281666)
[»] scaffold0149 (2 HSPs)
scaffold0149 (83-207)||(24612-24737)
scaffold0149 (81-135)||(24687-24742)
[»] scaffold0036 (1 HSPs)
scaffold0036 (157-205)||(89609-89657)


Alignment Details
Target: chr2 (Bit Score: 91; Significance: 4e-44; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 295
Target Start/End: Original strand, 2544360 - 2544566
Alignment:
Q  86 actattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| || |||||||||| |||| |||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||| ||| ||| ||||||    
T  2544360 actattataaacaaaaattaattttttagattcattcattaaatgacttatttggtcaataatatagaccaaatacatcatttaatgaatgaacctaaaa 2544459  T
Q  185 agtttatttttgcttataatagtaactgaagggagtataaattatcaatgttttcaatnnnnnnnttgttggagttaccttacagatagcactaagctgt 284  Q
    |||| ||||||| |||| |||||||| | |||||||||||||||||||||||||| ||       |||||||| |||||||||||||| |||   |||||    
T  2544460 agttgatttttgtttatgatagtaacaggagggagtataaattatcaatgttttcgat-aaaaaattgttggaattaccttacagataccac---gctgt 2544555  T
Q  285 aacccttactt 295  Q
    |||||||||||    
T  2544556 aacccttactt 2544566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 5559461 - 5559576
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| ||||||||  ||||||  ||||||| |||| | |||||||| |||||| ||| |||| ||||||||| |||||||||||||| |||    
T  5559461 ttttagattcatttattaaatgttgtattttgtcaataacatagactaaatacataatttaatgaatgaatataaaaagttgatttttgcttataacagt 5559560  T
Q  208 aactgaagggagtata 223  Q
    || || ||||||||||    
T  5559561 aattggagggagtata 5559576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 207
Target Start/End: Original strand, 15119779 - 15119908
Alignment:
Q  79 ttcggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaa 177  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||||||||| |||| |  || |||||| || | | |||||||||| || |||  ||    
T  15119779 ttcggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtctataataaagacaatatacatcattaaatgaataaa 15119878  T
Q  178 tctaaaaagtttatttttgcttataatagt 207  Q
    ||||||| ||  ||||||||||||||||||    
T  15119879 tctaaaatgtagatttttgcttataatagt 15119908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 81 - 224
Target Start/End: Complemental strand, 23143622 - 23143478
Alignment:
Q  81 cggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||| ||||||| || || ||||| ||||||| ||||||  || ||||| |||  |||||||||||||||   |  ||| |    
T  23143622 cggtcactattataagcaaaaatcaactttttaggtttattcaataaatgatgtatttggtccataatgtagatcaaatacatcatttattaagtgaacc 23143523  T
Q  180 taaaaagtttatttttgcttataatagtaactgaagggagtataa 224  Q
    ||||||||| |||||||||||||||||| || |||||||||||||    
T  23143522 taaaaagttgatttttgcttataatagtgaccgaagggagtataa 23143478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 81 - 224
Target Start/End: Complemental strand, 23555412 - 23555268
Alignment:
Q  81 cggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||| ||||||| || || ||||| ||||||| ||||||  || ||||| |||  |||||||||||||||   |  ||| |    
T  23555412 cggtcactattataagcaaaaatcaactttttaggtttattcaataaatgatgtatttggtccataatgtagatcaaatacatcatttattaagtgaacc 23555313  T
Q  180 taaaaagtttatttttgcttataatagtaactgaagggagtataa 224  Q
    ||||||||| |||||||||||||||||| || |||||||||||||    
T  23555312 taaaaagttgatttttgcttataatagtgaccgaagggagtataa 23555268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 212
Target Start/End: Original strand, 11726500 - 11726631
Alignment:
Q  81 cggtgactattacaagcaaaaattaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatct 180  Q
    |||| ||||||| |||||||||| |  ||||||||||||||| | ||||| |||| |||||  || ||| |  || ||||||||||||| ||| ||||||    
T  11726500 cggtcactattataagcaaaaataacattttagattcattcaatcaatgatgtatataatctttattatggatcacatacatcatttaatgaatgaatct 11726599  T
Q  181 aaaaagtttatttttgcttataatagtaactg 212  Q
    |||| ||| |||||||||||||||||| ||||    
T  11726600 aaaatgttaatttttgcttataatagtgactg 11726631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 15119913 - 15119770
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||||||||||  || ||||||||| ||||||| ||||| |||| |  ||  || ||||| ||| ||||||||||||| ||| |||||    
T  15119913 cggtcactattataagcaaaaatctacattttagatttattcatttaatgatgtatattgtctttattatagaccacatacatcatttaatgaatgaatc 15119814  T
Q  180 taaaaagtttatttttgcttataatagtaactgaagggagtata 223  Q
    ||||| ||| |||||||||||||||||| || |||||| |||||    
T  15119813 taaaatgttaatttttgcttataatagtgaccgaagggtgtata 15119770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 11726626 - 11726505
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||| |||| | ||| |||||| ||   | |||||||||| |  ||| ||||||||||    
T  11726626 actattataagcaaaaattaacattttagattcattcattaaatgatgtatgtgatccataataaagattatatacatcattgattgaatgaatctaaaa 11726527  T
Q  185 agtttatttttgcttataatagt 207  Q
     | ||||||||||||||||||||    
T  11726526 tg-ttatttttgcttataatagt 11726505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 221
Target Start/End: Original strand, 23143482 - 23143631
Alignment:
Q  73 actccattcggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacg 171  Q
    ||||| |||||| ||||||| |||||||||| ||||||| || |||| | | ||||||| |||||| ||| | | ||| | ||||||||||||||||  |    
T  23143482 actcccttcggtcactattataagcaaaaatcaactttttaggttcacttaataaatgatgtatttgatctacattatggaccaaatacatcatttattg 23143581  T
Q  172 aacgaatctaaaaagtttatttttgcttataatagtaactgaagggagta 221  Q
    ||  || |||||||||| |||||||||||||||||| || | ||||||||    
T  23143582 aataaacctaaaaagttgatttttgcttataatagtgaccggagggagta 23143631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 221
Target Start/End: Original strand, 23555272 - 23555421
Alignment:
Q  73 actccattcggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacg 171  Q
    ||||| |||||| ||||||| |||||||||| ||||||| || |||| | | ||||||| |||||| ||| | | ||| | ||||||||||||||||  |    
T  23555272 actcccttcggtcactattataagcaaaaatcaactttttaggttcacttaataaatgatgtatttgatctacattatggaccaaatacatcatttattg 23555371  T
Q  172 aacgaatctaaaaagtttatttttgcttataatagtaactgaagggagta 221  Q
    ||  || |||||||||| |||||||||||||||||| || | ||||||||    
T  23555372 aataaacctaaaaagttgatttttgcttataatagtgaccggagggagta 23555421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 31024279 - 31024180
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||||||||||| |||| |  ||  || ||| | ||| ||||||||||||| ||| |||||||||| ||| ||||||||||||||||||    
T  31024279 ttttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagt 31024180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 1961440 - 1961318
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||||| |||| |  || |||||| || ||| |||||||||| |   ||| |||||||||    
T  1961440 actattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattaaacaaatctaaaa 1961341  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||  ||||||||||||||||||    
T  1961340 tgtaaatttttgcttataatagt 1961318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 25270865 - 25270987
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||| |||||||| |||||||||||||| |||| || ||  || ||||  ||  ||||||||||||| ||| ||||||||||    
T  25270865 actattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaa 25270964  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||  ||||||||||||||||||    
T  25270965 tgtagatttttgcttataatagt 25270987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 38465793 - 38465930
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||| ||| ||||||||| ||||||||||||| |||| |  || |||||| || ||| |||||||||| |  ||| |||||    
T  38465793 cggtcactattataagcaaaaatcaacattttagattaattcattaaatgatgtatgtggtccataataaagaccatatacatcattaattgaatgaatc 38465892  T
Q  180 taaaaagtttatttttgcttataatagtaactgaaggg 217  Q
    ||||| ||  ||||||||||| |||||| |||| ||||    
T  38465893 taaaatgtagatttttgcttacaatagtgactggaggg 38465930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 7650186 - 7650274
Alignment:
Q  73 actccattcggtgactattacaagcaaaaattaacttttaga-ttcattcattaaatgacgtatttaatcaataatataggccaaatac 160  Q
    ||||| |||| | ||||||  |||||||||| |||||||  | |||||||||||||||| |||||| ||||||||||||||||||||||    
T  7650186 actcccttcgatcactattgtaagcaaaaatcaactttttaagttcattcattaaatgatgtatttgatcaataatataggccaaatac 7650274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 31024175 - 31024279
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||| ||| ||||||||||||||||||||||| |||| |  || |||||| || | | ||||||||||||| ||| |||||    
T  31024175 cggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatc 31024274  T
Q  180 taaaa 184  Q
    |||||    
T  31024275 taaaa 31024279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 35498155 - 35498230
Alignment:
Q  109 tttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    |||||||||||||| ||||||| ||||||||||||||| |||| ||||||||||||||||  ||| ||| |||||||    
T  35498155 tttagattcattcaataaatgatgtatttaatcaataa-atagaccaaatacatcatttattgaatgaacctaaaaa 35498230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 2544459 - 2544360
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||| |||||||||||||||| ||||||  || ||| ||| | |||||||  |||||||| ||| ||||||||||| || ||||||| ||||||||||    
T  2544459 ttttaggttcattcattaaatgatgtatttggtctatattattgaccaaataagtcatttaatgaatgaatctaaaaaattaatttttgtttataatagt 2544360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 25270992 - 25270865
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||||||||||  || ||||||||||||||||||||||| ||||    |  |||||| || | | ||||||||||||| ||| | |||    
T  25270992 cggtcactattataagcaaaaatctacattttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaatgtatc 25270893  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||||||||||||||||||    
T  25270892 taaaacgttgatttttgcttataatagt 25270865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 41056897 - 41057019
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||  |||||||| |||||||||||||| |||| || ||  || ||||  ||  ||||||||||||| ||| ||||||||||    
T  41056897 actattataagcaaaaatcaatgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaa 41056996  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||  ||||||||||||||||||    
T  41056997 tgtagatttttgcttataatagt 41057019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 1961380 - 1961440
Alignment:
Q  147 tataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||||||||||||| ||| |||||||||| ||| ||||||||||||||||||    
T  1961380 tatagaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagt 1961440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 3098137 - 3098257
Alignment:
Q  88 tattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| |||||||||| ||| |||||||| |||| ||||||||| |||| || ||  || ||||  ||  ||||||||||||| ||| |||||||||| |    
T  3098137 tattataagcaaaaatcaacgttttagatacatttattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatg 3098236  T
Q  187 tttatttttgcttataatagt 207  Q
    |  ||||||||||||||||||    
T  3098237 tagatttttgcttataatagt 3098257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 37182947 - 37182831
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| | ||||||||| || ||||| ||||||||||||||||| |||| |  || |||||| |||| | |||||||||||||  || ||||||||||    
T  37182947 actattatacgcaaaaatttacattttaaattcattcattaaatgatgtatgtggtctataataaaggctatatacatcatttaattaatgaatctaaaa 37182848  T
Q  185 agtttatttttgcttat 201  Q
     ||  ||||||||||||    
T  37182847 tgtaaatttttgcttat 37182831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 37182833 - 37182947
Alignment:
Q  94 aagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatt 192  Q
    ||||||||||| || ||||||||||||| ||||||||| |||| ||  |  || ||||| ||| ||||||||||||| ||| |||| ||||| ||  |||    
T  37182833 aagcaaaaatttacattttagattcattaattaaatgatgtatatagcctttattatagaccacatacatcatttaatgaatgaatttaaaatgtaaatt 37182932  T
Q  193 tttgcttataatagt 207  Q
    ||||| |||||||||    
T  37182933 tttgcgtataatagt 37182947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 26003467 - 26003584
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||| |||||||||||||||| |||| || |  |||||| || ||| |||||||||| |  ||| |||||||||| ||  |||||||||||||| |||    
T  26003467 ttttaggttcattcattaaatgatgtatgtagtatataataaagaccatatacatcattaattgaatgaatctaaaatgtagatttttgcttataaaagt 26003566  T
Q  208 aactgaagggagtataaa 225  Q
     |||| | || |||||||    
T  26003567 gactggatggtgtataaa 26003584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 205
Target Start/End: Original strand, 19268077 - 19268189
Alignment:
Q  94 aagcaaaaattaacttttaga-ttcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatt 192  Q
    |||||||||| |||||||  | |||||||| ||||||| ||||||| ||||||||||||   |||||||| ||||    || ||| |||||||||| |||    
T  19268077 aagcaaaaatcaactttttaagttcattcaataaatgatgtatttagtcaataatatagatgaaatacattatttcttaaatgaacctaaaaagttgatt 19268176  T
Q  193 tttgcttataata 205  Q
     ||||||||||||    
T  19268177 gttgcttataata 19268189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 7650252 - 7650185
Alignment:
Q  154 caaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagta 221  Q
    |||||||||||||||| ||| |||  ||||||||| ||||||||||| |||||| |  ||||||||||    
T  7650252 caaatacatcatttaatgaatgaacttaaaaagttgatttttgcttacaatagtgatcgaagggagta 7650185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 13333583 - 13333456
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||||||||||  || ||||||||||||| ||||||||| ||||    |  |||||| |  | | ||||||||||||| ||| | |||    
T  13333583 cggtcactattataagcaaaaatctacattttagattcattgattaaatgatgtatgcggtttataatacaaactacatacatcatttaatgaatgtatc 13333484  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||||||||||||||||||    
T  13333483 taaaacgttgatttttgcttataatagt 13333456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 210
Target Start/End: Original strand, 38181771 - 38181894
Alignment:
Q  88 tattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| |||||||||| ||  ||||||||||||||||||||||| |||| | ||| | |||| || | | |||||||||| |  ||| |||| ||||| |    
T  38181771 tattataagcaaaaatcaatattttagattcattcattaaatgatgtatgtgatctacaataaagactatatacatcattaattgaatgaatgtaaaatg 38181870  T
Q  187 tttatttttgcttataatagtaac 210  Q
    |   ||||||||||||||||||||    
T  38181871 tagttttttgcttataatagtaac 38181894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 38465897 - 38465798
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||| | ||||| |||| |  ||  || ||| | ||| ||||||||||||| |||  ||||||||| ||| ||||||||||||||||||    
T  38465897 ttttagattcattcaattaatgatgtatatggtctttattatggaccacatacatcatttaatgaattaatctaaaatgttgatttttgcttataatagt 38465798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 5559552 - 5559442
Alignment:
Q  94 aagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatt 192  Q
    |||||||||| ||||||| | ||||||||||||||| | ||||||| || ||  ||| | | ||||||| |||||||  || ||||||||||| || |||    
T  5559552 aagcaaaaatcaactttttatattcattcattaaattatgtatttagtctatgttattgacaaaatacaacatttaataaatgaatctaaaaaattgatt 5559453  T
Q  193 tttgcttataa 203  Q
    ||| |||||||    
T  5559452 tttacttataa 5559442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 21183408 - 21183454
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataa 203  Q
    ||||||||||||| ||| |||||||||| ||| ||||||||||||||    
T  21183408 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataa 21183454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 32630514 - 32630408
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||| ||||||||||||| |||| || || |||||| || ||| |||||||||| |  ||| ||||| |||| ||  ||||||| |||||||| |    
T  32630514 ttttagatttattcattaaatgatgtatgtagtctataataaagaccatatacatcattaattgaatgaatccaaaatgtagatttttgtttataataat 32630415  T
Q  208 aactgaa 214  Q
     ||||||    
T  32630414 gactgaa 32630408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 212
Target Start/End: Complemental strand, 8740627 - 8740523
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||| |||||||||| ||||| |||| |  || |||||| || |||  | ||||||| || ||| |||||||||| ||  ||||||||||||||||||    
T  8740627 ttttaggttcattcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtagatttttgcttataatagt 8740528  T
Q  208 aactg 212  Q
     ||||    
T  8740527 gactg 8740523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 12242272 - 12242348
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||||||||||| ||||||| |||| | ||| | |||| || | | ||||||||||||| ||| ||||||||||    
T  12242272 ttttagattcattcaataaatgatgtatgttatctacaataaagactacatacatcatttaatgaatgaatctaaaa 12242348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 20057138 - 20057214
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||| ||| |||||||||||||||||| ||||| |||||| || | | |||| |||||||| | | ||||||||||    
T  20057138 ttttaaattgattcattaaatgacgtatgtaatctataataaagactacatacgtcatttaatggatgaatctaaaa 20057214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 38181819 - 38181771
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataata 205  Q
    ||||||||||||| ||| ||||||||||  || ||||||||||||||||    
T  38181819 atacatcatttaatgaatgaatctaaaatattgatttttgcttataata 38181771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 220
Target Start/End: Original strand, 25694117 - 25694259
Alignment:
Q  79 ttcggtgactattacaagcaaaaattaacttt-tagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaa 177  Q
    |||||| ||||||| |||||||||| |||||| ||| |||||||||||||||| ||||||  |||||||||||| ||||||||||||||||| ||| |||    
T  25694117 ttcggttactattataagcaaaaatcaactttctaggttcattcattaaatgatgtattttgtcaataatatagaccaaatacatcatttaatgaatgaa 25694216  T
Q  178 tctaaaaagtttatttttgcttataatagtaactgaagggagt 220  Q
     ||| |||||| |||||||||||||||||| || | |||||||    
T  25694217 cctagaaagttgatttttgcttataatagtgaccggagggagt 25694259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 25694251 - 25694121
Alignment:
Q  81 cggtgactattacaagcaaaaattaacttt-tagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||| |||||| ||| |||||||||||||||| ||||||  || ||| ||| | | ||||||||||||||| ||| ||| |    
T  25694251 cggtcactattataagcaaaaatcaactttctaggttcattcattaaatgatgtatttggtctatattattgacaaaatacatcatttaatgaatgaacc 25694152  T
Q  180 taaaaagtttatttttgcttataatagtaac 210  Q
    || |||||| |||||||||||||||||||||    
T  25694151 tagaaagttgatttttgcttataatagtaac 25694121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 13391563 - 13391677
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||| ||||||| ||||||  |||||||||||| | |||||||| |||||  ||| ||| |||||||||| |||||||||||||| |||    
T  13391563 ttttagattcattcaataaatgatgtatttggtcaataatatagactaaatacataatttattgaatgaacctaaaaagttgatttttgcttataacagt 13391662  T
Q  208 aactgaagggagtat 222  Q
     || | |||||||||    
T  13391663 gacaggagggagtat 13391677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 7613362 - 7613505
Alignment:
Q  81 cggtgactattacaagcaaaaattaacttttaga-ttcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||| |||||||  | |||||||||||||||  ||||||| || ||| |||   ||||||||||||||||   || |||||    
T  7613362 cggtcactattataagcaaaaatcaactttttaagttcattcattaaatgcagtatttagtctatattattaaccaaatacatcatttattaaatgaatc 7613461  T
Q  180 taaaaagtttatttttgcttataatagtaactgaagggagtata 223  Q
    ||||||||| | |||| ||||||| ||| |||| ||||||||||    
T  7613462 taaaaagttgacttttacttataacagtgactggagggagtata 7613505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 13391654 - 13391540
Alignment:
Q  94 aagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatt 192  Q
    |||||||||| ||||||| || |||||||| ||||| | ||||||| || ||| ||| | ||||||||||||||||  ||| |||||||||||||| | |    
T  13391654 aagcaaaaatcaactttttaggttcattcaataaattatgtatttagtctatattattgaccaaatacatcatttattgaatgaatctaaaaagttgact 13391555  T
Q  193 tttgcttataatagt 207  Q
    ||| |||||||||||    
T  13391554 tttacttataatagt 13391540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 7613466 - 7613367
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| | ||||||| ||||||  | |||||||||| | ||||||  ||||||| ||| |||  ||||||||| ||||||||||||||||||    
T  7613466 ttttagattcatttaataaatgatgtatttggttaataatatagactaaatactgcatttaatgaatgaacttaaaaagttgatttttgcttataatagt 7613367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 3100414 - 3100536
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||||||| ||||||||||||||| ||||||| |||| || || |||||| ||  || |||||||||| |  ||| ||||||||||    
T  3100414 actattataagcaaaaattaacattttagattcattcaataaatgatgtatgtagtctataataaagatcatatacatcattaattgaatgaatctaaaa 3100513  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||  |||||  |||||||||||    
T  3100514 tgtaaattttcacttataatagt 3100536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 228
Target Start/End: Complemental strand, 27314583 - 27314463
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||||||||||||||||||||||||| || ||  || ||||| | | |||| |||||||| ||| |||||||||||    ||||||||||||| ||||    
T  27314583 ttttagattcattcattaaatgacgtatgtagtctttattatagactacatacgtcatttaatgaatgaatctaaaaaccaaatttttgcttatattagt 27314484  T
Q  208 aactgaagggagtataaatta 228  Q
     || | |||| ||| ||||||    
T  27314483 gaccggagggtgtacaaatta 27314463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 27314507 - 27314583
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    |||||||||||||||||||||||||||| || || |||||| || | | |||| |||||||| ||| ||||||||||    
T  27314507 ttttagattcattcattaaatgacgtatgtagtctataataaagactacatacgtcatttaatgaatgaatctaaaa 27314583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 1100165 - 1100070
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataa 203  Q
    ||||||||| ||||||||||||| |||| || ||  || ||||| ||| ||||||||||||| ||| |||||||||| ||  | ||||||||||||    
T  1100165 ttttagattaattcattaaatgatgtatgtagtctttattatagaccacatacatcatttaatgaatgaatctaaaatgtaaacttttgcttataa 1100070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 3100513 - 3100414
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||| | ||||| |||| | |||  || ||||| | | ||||||||||||  ||| |||||||||| ||| ||||||||||||||||||    
T  3100513 ttttagattcattcaattaatgatgtatatgatctttattatagactacatacatcatttattgaatgaatctaaaatgttaatttttgcttataatagt 3100414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 13654644 - 13654518
Alignment:
Q  81 cggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||||||||||| |||||| | ||||||||| ||||||| ||||||| || ||| ||| | ||| ||||||||||||  ||| ||| |    
T  13654644 cggtcactattataagcaaaaattcactttttaaattcattcaataaatgatgtatttagtctata-tatggaccacatacatcatttattgaatgaacc 13654546  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    ||||||||  || ||| |||||||||||    
T  13654545 taaaaagtcaatatttacttataatagt 13654518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 17625672 - 17625771
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||||||||||| ||||    |  |||||| || | | ||||||||||||| ||| | |||||||| ||| ||||||||||||||||||    
T  17625672 ttttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagt 17625771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 22227045 - 22227112
Alignment:
Q  140 tcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||||||||| | ||||| ||||||||| ||| ||| |||||| ||| ||||||||||||||||||    
T  22227045 tcaataatatagactaaatatatcatttaatgaatgaacctaaaacgttgatttttgcttataatagt 22227112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 166
Target Start/End: Original strand, 25773242 - 25773333
Alignment:
Q  76 ccattcggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatt 166  Q
    |||||||||  ||| || |||||||| | ||| ||||||||||||||||||||||| |||||| ||| |||||| || ||| ||||||||||    
T  25773242 ccattcggtcgctaatataagcaaaagtgaacattttagattcattcattaaatgatgtatttgatctataataaagaccatatacatcatt 25773333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 33075097 - 33075196
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||| | ||| |||||| | |||  || ||||| ||| ||||||||||||| ||| ||| ||||||  || ||||||||||||||||||    
T  33075097 ttttagattcattcaattaataacgtatatgatctttactatagaccacatacatcatttaatgaatgaacctaaaatattaatttttgcttataatagt 33075196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 17625771 - 17625650
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||| |||||||| |||||||||||||| |||| || ||  || ||||  ||  ||||||||||||| ||| ||||||||||    
T  17625771 actattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaa 17625672  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||  |||||| |||||||||||    
T  17625671 tgtagattttt-cttataatagt 17625650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 4739612 - 4739700
Alignment:
Q  132 gtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagta 221  Q
    |||||| ||||||||||||| |||||||||| |||||  |||  ||| |||||| |||  ||||| |||||||||||| |||||||||||    
T  4739612 gtatttgatcaataatatagaccaaatacattatttattgaattaatttaaaaa-tttgattttgtttataatagtaattgaagggagta 4739700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 1996879 - 1996979
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataat-ataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatag 206  Q
    |||||||||||||||||||||||||||| || || ||||| | || | | |||| |||||||| ||| |||||||||||    ||||||||||||| |||    
T  1996879 ttttagattcattcattaaatgacgtatgtagtctataataaaagtctacatacgtcatttaatgaatgaatctaaaaatcaaatttttgcttatattag 1996978  T
Q  207 t 207  Q
    |    
T  1996979 t 1996979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 20518203 - 20518311
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||| ||||||| ||||| |||| |  || |||||| || |||  | ||||||| || ||| |||| ||||||||  ||||||||||||||||||    
T  20518203 ttttagatttattcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatgtaaaaagtagatttttgcttataatagt 20518302  T
Q  208 aactgaagg 216  Q
     ||||||||    
T  20518303 gactgaagg 20518311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 212
Target Start/End: Original strand, 27895929 - 27896032
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| | ||||||| |||| || || ||| |||||| || ||||||||||||   || ||| |||||||||| ||||||| || |||||||    
T  27895929 ttttagattcatttaataaatgatgtatgtagtctata-tataggtcacatacatcatttattaaatgaacctaaaaagttaatttttgtttgtaatagt 27896027  T
Q  208 aactg 212  Q
    |||||    
T  27896028 aactg 27896032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 13654541 - 13654639
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||| |||||||| ||||||| |||| |  || ||| ||||| | ||||||||||||||  ||| |||| ||||||||  ||||||||||||||||||    
T  13654541 ttttaggttcattcaataaatgatgtatgtggtccata-tatagactaaatacatcatttattgaatgaatttaaaaagtgaatttttgcttataatagt 13654639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 18652846 - 18652901
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactg 212  Q
    ||||||||||||| ||| |||||||||| ||| ||||||| |||||||||| ||||    
T  18652846 atacatcatttaatgaatgaatctaaaatgttgatttttgtttataatagtgactg 18652901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 25792927 - 25792977
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| ||| ||| |||||||||  ||||||||||||||||||    
T  25792927 atacatcatttaatgaatgaacctaaaaagtaaatttttgcttataatagt 25792977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 32911502 - 32911560
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatt 166  Q
    |||||| |||||| ||||||||| ||||||| || ||||||||| | ||||||||||||    
T  32911502 ttttaggttcatttattaaatgatgtatttagtctataatatagactaaatacatcatt 32911560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 43506175 - 43506225
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| ||| |||||||||||||  | ||||||||||||||||    
T  43506175 atacatcatttaatgaatgaatctaaaaagtgaaattttgcttataatagt 43506225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 1100089 - 1100186
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataata 205  Q
    ||||||||||||||||||||||| |||| |  || |||||| || | | ||||||||||||| |||  ||||||||| |   | ||||||||||||||    
T  1100089 ttttagattcattcattaaatgatgtatgtggtctataataaagactacatacatcatttaatgaattaatctaaaatgcaaagttttgcttataata 1100186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 11795838 - 11795745
Alignment:
Q  114 attcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||||||||||||||  ||| |  || |||||| || ||| |||||||||| |  ||| |||||||||| ||| ||||||||||||| ||||    
T  11795838 attcattcattaaatgatatatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaatgttgatttttgcttatattagt 11795745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 16899795 - 16899718
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    |||||| |||||||||||||||| |||| ||||  ||||||||| | | |||| ||||||||  || |||||||||||    
T  16899795 ttttaggttcattcattaaatgatgtatataatttataatatagactacatacgtcatttaataaatgaatctaaaaa 16899718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 32911571 - 32911624
Alignment:
Q  155 aaatacatcatttaacgaacgaatctaaaaagttta-tttttgcttataatagt 207  Q
    ||||||||||||||| ||| ||| |||||||||| | |||||||||||||||||    
T  32911571 aaatacatcatttaatgaatgaacctaaaaagttgattttttgcttataatagt 32911624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 37067671 - 37067618
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaac 210  Q
    ||||||||||||| ||| ||||||||||  || ||||||| |||||||||||||    
T  37067671 atacatcatttaatgaatgaatctaaaatattaatttttgtttataatagtaac 37067618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 40100223 - 40100096
Alignment:
Q  81 cggtgactattacaagcaaaaattaactttt--agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaat 178  Q
    |||| ||||||| ||||||||||| | ||||  ||||||||||| ||||||| |||| || |  ||| ||||| ||| | ||||||||||   || ||||    
T  40100223 cggtcactattataagcaaaaattcatttttttagattcattcagtaaatgatgtatgtagttcata-tatagaccacacacatcatttattaaatgaat 40100125  T
Q  179 ctaaaaagtttatttttgcttataatagt 207  Q
     ||||||||  ||||||||||||||||||    
T  40100124 ttaaaaagtcaatttttgcttataatagt 40100096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 71263 - 71392
Alignment:
Q  81 cggtgactattacaagcaaaaat-taacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||| ||  ||||||||||||||| | ||||| |||| | |||  || ||||| ||| ||||| ||||||| ||| |||||    
T  71263 cggtcactattataagcaaaaatctatattttagattcattcaattaatgatgtatatgatctttattatagaccacataca-catttaatgaatgaatc 71361  T
Q  180 taaaaa---gtttatttttgcttataatagt 207  Q
    ||| ||   ||| ||||||||||||||||||    
T  71362 taataaaatgttgatttttgcttataatagt 71392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 4349121 - 4349201
Alignment:
Q  88 tattacaagcaaaaattaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcattta 168  Q
    ||||| |||||||||| |||||||  ||||||| | |||||    |||||  |||||||||||| ||||||||||||||||    
T  4349121 tattataagcaaaaatcaactttttaattcatttaataaattgtttattttgtcaataatatagaccaaatacatcattta 4349201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 14772605 - 14772557
Alignment:
Q  159 acatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||| ||| ||| |||||| ||| ||||||||||||||||||    
T  14772605 acatcatttaatgaatgaacctaaaatgttgatttttgcttataatagt 14772557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 25772263 - 25772163
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatac-atcatttaacgaacgaatctaaaaagtttatttttgcttataatag 206  Q
    ||||||||||||||||||||| |||||| || || |||||| || | | ||||  |||||||| ||| |||||||||||    ||||||||||||| |||    
T  25772263 ttttagattcattcattaaataacgtatatagtctataataaagactacatacgttcatttaatgaatgaatctaaaaatcaaatttttgcttatattag 25772164  T
Q  207 t 207  Q
    |    
T  25772163 t 25772163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 25773305 - 25773257
Alignment:
Q  154 caaatacatcatttaacgaacgaatctaaaaagtttatttttgcttata 202  Q
    |||||||||||||||| ||| |||||||||| ||| | |||||||||||    
T  25773305 caaatacatcatttaatgaatgaatctaaaatgttcacttttgcttata 25773257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 32911560 - 32911480
Alignment:
Q  126 aatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagttta-tttttgcttataata 205  Q
    ||||| ||||||| || ||| ||||| | |||||||||||||||  || ||| |||||||||| | |||||||||||||||    
T  32911560 aatgatgtatttagtctatattatagactaaatacatcatttaataaatgaacctaaaaagttgattttttgcttataata 32911480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 8e-30; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 88 - 209
Target Start/End: Original strand, 28038838 - 28038960
Alignment:
Q  88 tattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| |||||||||||||||||| ||||||||||||||||||  ||||||  |||||||||||  | |||||||||||||||  || ||||||||||||    
T  28038838 tattataagcaaaaattaactttttagattcattcattaaatgttgtatttggtcaataatataaactaaatacatcatttaataaatgaatctaaaaag 28038937  T
Q  187 tttatttttgcttataatagtaa 209  Q
    || ||||||||||||||||||||    
T  28038938 ttgatttttgcttataatagtaa 28038960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 28038958 - 28038838
Alignment:
Q  86 actattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||||||| ||||||||| ||||||||| ||||||| |  ||| ||| | ||||||||| ||||||| ||| ||||||||||    
T  28038958 actattataagcaaaaatcaactttttagattcatttattaaatgatgtatttagtttatattattgaccaaatacaacatttaatgaatgaatctaaaa 28038859  T
Q  185 agtttatttttgcttataata 205  Q
    |||| ||||||||||||||||    
T  28038858 agttaatttttgcttataata 28038838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 73 - 207
Target Start/End: Original strand, 50308624 - 50308759
Alignment:
Q  73 actccattcggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacg 171  Q
    |||||||  ||| ||||||| |||||||||| ||||||| ||||| ||||||||||| | ||||||  ||||||| |||| ||||||||||||||||| |    
T  50308624 actccatctggtcactattataagcaaaaatcaactttttagatttattcattaaattatgtatttggtcaataacatagaccaaatacatcatttaatg 50308723  T
Q  172 aacgaatctaaaaagtttatttttgcttataatagt 207  Q
    || |||  ||||| |||  |||||||||||||||||    
T  50308724 aatgaacttaaaatgttggtttttgcttataatagt 50308759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 14967356 - 14967234
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||||| |||| | |||  || ||||||||| ||||||||||||| |||  ||| |||||    
T  14967356 actattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtgatctttattataggccacatacatcatttaatgaataaatgtaaaa 14967257  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||| |||||||||||| |||||    
T  14967256 tgttgatttttgcttatgatagt 14967234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 24981850 - 24981972
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||||||| |||||||| |||||||||||||| |||| || ||  || ||||  ||  ||||||||||||| ||| ||||||||||    
T  24981850 actattataagcaaaaattaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaa 24981949  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||| ||||||||||||||||||    
T  24981950 tgttgatttttgcttataatagt 24981972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 9675970 - 9676111
Alignment:
Q  81 cggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||| |||||||||||||| || |||||| | ||||| | ||||||| ||||| |||||| | |||||||||||||| | || |||||    
T  9675970 cggtcactattataagtaaaaattaactttttaggttcatttaataaataatgtatttagtcaattatatagactaaatacatcatttatcaaatgaatc 9676069  T
Q  180 taaaaagtttatttttgcttataatagtaactgaagggagta 221  Q
    ||| || || |||||| ||||||||||| || ||||||||||    
T  9676070 taagaaattgatttttacttataatagtgaccgaagggagta 9676111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 41007709 - 41007824
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||||||||||||| |||| |  || |||||| || ||| ||||||||||||| ||| |||||||||| ||| | ||||||||||||||||    
T  41007709 ttttaaatttattcattaaatgatgtatgtggtctataataaagaccacatacatcatttaatgaatgaatctaaaatgttgaattttgcttataatagt 41007808  T
Q  208 aactgaagggagtata 223  Q
    ||||||| || |||||    
T  41007809 aactgaaaggtgtata 41007824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 24981977 - 24981850
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||| ||| ||||||||||||||||||||||| ||||    |  |||||| || | | ||||||||||||| ||| | |||    
T  24981977 cggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaatgtatc 24981878  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||||||||||||||||||    
T  24981877 taaaacgttaatttttgcttataatagt 24981850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 50308759 - 50308637
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||  ||| |||||  |||||||||||||||| ||||||  || ||  ||| | |||||||||| |||||| |||  |||||||||    
T  50308759 actattataagcaaaaaccaacattttaagttcattcattaaatgatgtatttggtctatgttattgaccaaatacataatttaatgaataaatctaaaa 50308660  T
Q  185 agtttatttttgcttataatagt 207  Q
    |||| ||||||||||||||||||    
T  50308659 agttgatttttgcttataatagt 50308637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 29043562 - 29043465
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataata 205  Q
    |||||| |||||||| ||||||| ||||||  |||| ||||||| | |||||| |||||||  ||| ||| |||||||||| ||||||||||||||||    
T  29043562 ttttaggttcattcaataaatgatgtatttggtcaaaaatatagactaaatacgtcatttattgaatgaacctaaaaagttgatttttgcttataata 29043465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 214
Target Start/End: Complemental strand, 3549908 - 3549781
Alignment:
Q  88 tattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| |||||||||||||| ||||| ||||||||||||||| | |||| |  || |||||| || ||  ||| |||||| |  ||| |||||||||| |    
T  3549908 tattataagcaaaaattaacattttaaattcattcattaaataatgtatgtggtctataataaagaccgtatatatcattaattgaatgaatctaaaatg 3549809  T
Q  187 tttatttttgcttataatagtaactgaa 214  Q
    |  |||||||||||||||||||||||||    
T  3549808 tagatttttgcttataatagtaactgaa 3549781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 5431345 - 5431471
Alignment:
Q  81 cggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||||||||||| |||||| ||||||||||| ||||||| |||| |  || ||  | ||| ||| ||||||||||||  ||| |||||    
T  5431345 cggtcactattataagcaaaaattcactttttagattcattcaataaatgaagtatgttgtctatg-tgtagaccacatacatcatttattgaatgaatc 5431443  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    ||||||||| ||||||||||||| ||||    
T  5431444 taaaaagttaatttttgcttatattagt 5431471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 14967242 - 14967356
Alignment:
Q  94 aagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatt 192  Q
    |||||||||| ||| ||||| ||| ||||||||||||| |||| |   | |||||| ||  || ||||||||||||| ||| |||||||||| ||| |||    
T  14967242 aagcaaaaatcaacattttacatttattcattaaatgatgtatgtggcctataataaagatcacatacatcatttaatgaatgaatctaaaatgttgatt 14967341  T
Q  193 tttgcttataatagt 207  Q
    |||||||||||||||    
T  14967342 tttgcttataatagt 14967356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 11989341 - 11989418
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    |||||| ||||||||||||||||||||| || || |||||| || | | ||||||||||||| ||| |||||||||||    
T  11989341 ttttaggttcattcattaaatgacgtatgtagtctataataaagactacatacatcatttaatgaatgaatctaaaaa 11989418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 196
Target Start/End: Original strand, 29043465 - 29043574
Alignment:
Q  88 tattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| |||||||||| ||||||| || |||||||| ||||||||||||||| || ||| | | | ||||||||||||||||  ||| ||| |||||||     
T  29043465 tattataagcaaaaatcaactttttaggttcattcaataaatgacgtatttagtctatatttttgaccaaatacatcatttattgaatgaacctaaaaaa 29043564  T
Q  187 tttatttttg 196  Q
    || |||||||    
T  29043565 ttgatttttg 29043574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 15290686 - 15290606
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtt 188  Q
    ||||||||||||| | ||||||| ||||||  |||||||||||| | ||||||||||||||| ||| ||| ||| ||||||    
T  15290686 ttttagattcatttaataaatgatgtatttggtcaataatatagactaaatacatcatttaatgaatgaacctacaaagtt 15290606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 15290617 - 15290709
Alignment:
Q  115 ttcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||||||||||||| ||||||| || ||| ||| | ||||||||||||||||   || |||||||||||||| |   ||||||||||||||    
T  15290617 ttcattcattaaatgatgtatttagtctatattattgaccaaatacatcatttattaaatgaatctaaaaagttgacacttgcttataatagt 15290709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 34954027 - 34953895
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| ||||||||||| |  ||||||||||||||| | ||||| |||| |  ||  || ||||| ||| ||||||||||||| ||| |||| |||||    
T  34954027 actattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatttaaaa 34953928  T
Q  185 agtttatttttgcttataatagtaactgaaggg 217  Q
      || |||||||||||||||||| |||| ||||    
T  34953927 tattgatttttgcttataatagtgactggaggg 34953895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 2122602 - 2122700
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||| |||||||||||||||  |||| ||| | | ||||||| ||| ||||| ||||||| ||| ||||||||||| |  ||||||||||||||||||    
T  2122602 ttttagtttcattcattaaatgttgtatgtaaccta-aatatagaccacatacaacatttaatgaatgaatctaaaaaatggatttttgcttataatagt 2122700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 38834719 - 38834604
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||| ||||||| |||| |  ||| | |||||| | | ||||||||||||   || ||||||||||| |  ||||||||||||||||||    
T  38834719 ttttagattcattcaataaatgatgtatatggtcatttatatagactatatacatcatttatttaatgaatctaaaaaataaatttttgcttataatagt 38834620  T
Q  208 aactgaagggagtata 223  Q
     || | ||||||||||    
T  38834619 gaccggagggagtata 38834604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 48083612 - 48083513
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||| | ||| |||||| | |||  || ||||| ||| ||||||||||||| ||| ||| ||||||  || ||||||||||||||||||    
T  48083612 ttttagattcattcaattaataacgtatatgatctttattatagaccacatacatcatttaatgaatgaacctaaaatattaatttttgcttataatagt 48083513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 6156697 - 6156643
Alignment:
Q  153 ccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||| ||||||||||    
T  6156697 ccaaatacatcatttattgaatgaatctaaaaagttgatttttgtttataatagt 6156643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 34953905 - 34954027
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||  ||||| ||||||||||||||||| |||| |  || |||||| || ||| |||||||||| |  ||| ||||||||||    
T  34953905 actattataagcaaaaatcaatattttaaattcattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaa 34954004  T
Q  185 agtttatttttgcttataatagt 207  Q
      |  ||||||||||||||||||    
T  34954005 tataaatttttgcttataatagt 34954027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 46906984 - 46906870
Alignment:
Q  94 aagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatt 192  Q
    |||||||||| ||| |||||||| |||||||||||||| |||| || ||  || ||||  ||  ||||||||||||| ||| ||||||||||  |  |||    
T  46906984 aagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaatatagatt 46906885  T
Q  193 tttgcttataatagt 207  Q
    |||||||||||||||    
T  46906884 tttgcttataatagt 46906870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 19175669 - 19175734
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagtat 222  Q
    ||||||||||||  ||| |||||||||||||  |||||||||||||||||| |||| |||| ||||    
T  19175669 atacatcatttattgaatgaatctaaaaagtagatttttgcttataatagtgactggagggtgtat 19175734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 25554553 - 25554670
Alignment:
Q  87 ctattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    |||||| ||||||||| |||||||| ||||||||| | ||||||| |||| | ||  ||| |||||||||||||||||| |||   || ||  |||||||    
T  25554553 ctattataagcaaaaaataactttttagattcattgaataaatgatgtatgtgatatatactataggccaaatacatcagttatttaatgagcctaaaaa 25554652  T
Q  186 gtttatttttgcttataa 203  Q
    |||  |||||||||||||    
T  25554653 gttgttttttgcttataa 25554670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 41007808 - 41007691
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||| | ||| ||||||||||||||||||||||| |||| |  ||  || ||||| ||| ||||||||||||| |||  ||| |||||    
T  41007808 actattataagcaaaattcaacattttagattcattcattaaatgatgtatgtggtctttattatagaccacatacatcatttaatgaataaatttaaaa 41007709  T
Q  185 agtttatttttgcttata 202  Q
      || |||||||||||||    
T  41007708 tattgatttttgcttata 41007691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 29302173 - 29302073
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataat-ataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatag 206  Q
    |||||||||||||||||||||||||||| || || ||||| | || | | |||| |||||||| ||| |||||||||||    ||||||||||||| |||    
T  29302173 ttttagattcattcattaaatgacgtatgtagtctataataaaagtctacatacgtcatttaatgaatgaatctaaaaatcaaatttttgcttatattag 29302074  T
Q  207 t 207  Q
    |    
T  29302073 t 29302073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 1409130 - 1409193
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagt 220  Q
    ||||||||||||  ||| |||||||||||| | |||||||||||||||||| || | |||||||    
T  1409130 atacatcatttattgaatgaatctaaaaagataatttttgcttataatagtgaccggagggagt 1409193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 3013746 - 3013691
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    |||| ||||||| |||||||||||||| ||||| ||||||||||||||||| ||||    
T  3013746 cggtcactattataagcaaaaattaacattttacattcattcattaaatgatgtat 3013691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 223
Target Start/End: Complemental strand, 9676110 - 9675959
Alignment:
Q  73 actccattcggtgactattacaagcaaaaattaactt-ttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacg 171  Q
    ||||| |||||| ||||||| ||| |||||| || || |||||||||||   ||||||| ||||||| || |||  || | | |||||||| |||||       
T  9676110 actcccttcggtcactattataagtaaaaatcaatttcttagattcatttgataaatgatgtatttagtctatataattgactaaatacattatttatta 9676011  T
Q  172 aacgaatctaaaaagtttatttttgcttataatagtaactgaagggagtata 223  Q
    || ||| |||||||||| |||||| ||||||||||| || | ||||||||||    
T  9676010 aatgaacctaaaaagttaatttttacttataatagtgaccggagggagtata 9675959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 23398423 - 23398478
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    |||| ||||||| ||||||||| |||| ||||||||||||||||||||||| ||||    
T  23398423 cggtcactattataagcaaaaactaacattttagattcattcattaaatgatgtat 23398478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 3013691 - 3013741
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| ||| |||| ||||| ||| ||||||||||||||||||    
T  3013691 atacatcatttaatgaatgaatgtaaaatgttaatttttgcttataatagt 3013741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 23398478 - 23398428
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| ||| |||||||||| |||  |||||||||||||||||    
T  23398478 atacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagt 23398428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 47718 - 47795
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    ||||||||||||||||||||| || ||| ||  | |||||| || | | ||||||||||||| ||| |||||||||||    
T  47718 ttttagattcattcattaaataacatatgtagactataataaagactacatacatcatttaatgaatgaatctaaaaa 47795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 1602850 - 1602958
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||| |||| ||||||||||  |||| ||| | | ||||||| ||| ||||| ||||||| ||| ||| ||||||| |  ||||||||||||||||||    
T  1602850 ttttaggttcagtcattaaatgttgtatgtaaccta-aatatagaccacatacaacatttaatgaatgaacctaaaaaatgaatttttgcttataatagt 1602948  T
Q  208 aactgaaggg 217  Q
     |||| ||||    
T  1602949 gactggaggg 1602958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 10256851 - 10256790
Alignment:
Q  146 atataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||| ||| ||||||||||||  ||| |||||||||||||  |||||| |||||||||||    
T  10256851 atatagaccacatacatcatttattgaatgaatctaaaaagtgaattttttcttataatagt 10256790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 16426940 - 16427017
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    ||||||||||||||||| ||||| |||| | || |||||||| | ||| || ||||||| || ||| |||||||||||    
T  16426940 ttttagattcattcatttaatgatgtatgtgattaataatatggaccacattcatcattaaatgaatgaatctaaaaa 16427017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 33765858 - 33765915
Alignment:
Q  147 tataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataat 204  Q
    ||||| ||| |||||||||||||  || |||||||||| ||| |||||||||||||||    
T  33765858 tatagaccacatacatcatttaataaatgaatctaaaatgttgatttttgcttataat 33765915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 35544602 - 35544545
Alignment:
Q  147 tataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataat 204  Q
    ||||| ||| ||||||||||||||||| |||| ||||| ||| ||||||||| |||||    
T  35544602 tatagaccacatacatcatttaacgaatgaatttaaaatgttgatttttgctcataat 35544545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 42761561 - 42761464
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataata 205  Q
    |||| |||||||||||||||||| |||| || || |||||| ||  || |||||||||| |  ||| |||||||||| ||  | ||||||||||||||    
T  42761561 tttttgattcattcattaaatgatgtatatagtctataataaagatcagatacatcattaattgaatgaatctaaaatgtaaagttttgcttataata 42761464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 43738606 - 43738659
Alignment:
Q  78 attcggtgactattacaagcaaaaattaac-ttttagattcattcattaaatga 130  Q
    ||||||| ||||||| |||||||||||||| ||||| |||||||||||| ||||    
T  43738606 attcggtcactattataagcaaaaattaacattttaaattcattcattagatga 43738659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 45925366 - 45925273
Alignment:
Q  94 aagcaaaaattaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagt 187  Q
    |||||||| |||  |||||| |||||||||| ||||| |||| |  |  ||||||||| ||| |||||||||| || ||| |||||||||||||    
T  45925366 aagcaaaatttactttttaggttcattcatttaatgatgtatgtggttcataatatagaccacatacatcattaaatgaatgaatctaaaaagt 45925273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 46412712 - 46412757
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatga 130  Q
    ||||||| |||||||||||||  |||||||||||||||||||||||    
T  46412712 actattataagcaaaaattaatattttagattcattcattaaatga 46412757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 12750563 - 12750627
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagta 221  Q
    ||||||||||||  ||| |||| ||||||||  ||||||  ||||||||||||| ||||||||||    
T  12750563 atacatcatttattgaatgaatttaaaaagtcaatttttatttataatagtaaccgaagggagta 12750627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 42660416 - 42660352
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagta 221  Q
    ||||||||||||  ||| ||||||||||| |  | ||||||||||||||||||  ||||||||||    
T  42660416 atacatcatttattgaatgaatctaaaaaatcaacttttgcttataatagtaaacgaagggagta 42660352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 44939178 - 44939118
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcattta 168  Q
    ||||||||||||| | ||| ||| |||| ||||| | ||||||| ||||||||||||||||    
T  44939178 ttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacatcattta 44939118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 50155410 - 50155350
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcattta 168  Q
    ||||||||||||| | ||| ||| ||||||  || ||||||||| ||||||||||||||||    
T  50155410 ttttagattcattgagtaattgatgtatttggtctataatatagaccaaatacatcattta 50155350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 17871774 - 17871910
Alignment:
Q  88 tattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| |||||||||| ||||||| || |||||||||||||||| ||||||  |||||||||||| | ||||||||||||||| ||| ||| |||||||     
T  17871774 tattataagcaaaaatcaactttttaggttcattcattaaatgatgtatttggtcaataatatagactaaatacatcatttaatgaatgaacctaaaaaa 17871873  T
Q  187 tttatttttgcttataatagtaactgaagggagtata 223  Q
    || |||||||||||||||||| |||  ||||||||||    
T  17871874 ttgatttttgcttataatagtgactagagggagtata 17871910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 17871894 - 17871774
Alignment:
Q  86 actattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| || |||| || |||||||||||||||| ||||||| || ||| ||| | ||||||||||||||||| ||| ||| ||||||    
T  17871894 actattataagcaaaaatcaattttttaggttcattcattaaatgatgtatttagtctatattattgaccaaatacatcatttaatgaatgaacctaaaa 17871795  T
Q  185 agtttatttttgcttataata 205  Q
    |||| ||||||||||||||||    
T  17871794 agttgatttttgcttataata 17871774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 5888345 - 5888467
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||| |||| |  || |||||| || ||| |||||||||| |  ||| ||||||| ||    
T  5888345 actattataagcaaaaattaacgttttagattcattcattaaatgatgtatgttgtctataataaagaccatatacatcattaattgaatgaatctacaa 5888444  T
Q  185 agtttatttttgcttataatagt 207  Q
    |||  ||||||||||||||||||    
T  5888445 agtagatttttgcttataatagt 5888467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 17986233 - 17986325
Alignment:
Q  115 ttcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||||||||||||| ||||||  ||||||| |||| | ||||||||||||||| ||| ||| |||||||||| |||||| |||||||||||    
T  17986233 ttcattcattaaatgatgtatttggtcaataacatagactaaatacatcatttaatgaatgaacctaaaaagttgatttttacttataatagt 17986325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 11295784 - 11295673
Alignment:
Q  97 caaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttattttt 195  Q
    ||||||||||| ||||||||||||||||||||||| | || |  |  |||||| || ||| ||||||||||||| ||| | |||||||| ||| ||||||    
T  11295784 caaaaattaacattttagattcattcattaaatgatgcatgtggtttataataaagaccacatacatcatttaatgaatgtatctaaaatgttgattttt 11295685  T
Q  196 gcttataatagt 207  Q
    ||||||||||||    
T  11295684 gcttataatagt 11295673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 7484649 - 7484746
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataata 205  Q
    ||||||||||||||||||||||| |||| |  ||  || ||| | ||| ||||||||||||| ||| |||||||||| ||| ||||||||||||||||    
T  7484649 ttttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 7484746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 7429000 - 7428892
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||| ||||||| |||| | ||  ||||| |||| || ||||||||||||  ||| ||| ||||||  |  ||||||||||||||||||    
T  7429000 ttttagattcattcaataaatgatgtatgtgatttataatgtaggtcacatacatcatttattgaatgaacctaaaatatgaatttttgcttataatagt 7428901  T
Q  208 aactgaagg 216  Q
    |||||||||    
T  7428900 aactgaagg 7428892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 17986325 - 17986205
Alignment:
Q  86 actattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| ||| |||||| ||||||| || |||||||||||||||| ||||||| || ||  ||| | ||||||||||||||||| ||| |||  || ||    
T  17986325 actattataagtaaaaatcaactttttaggttcattcattaaatgatgtatttagtctatgttattgaccaaatacatcatttaatgaatgaacttataa 17986226  T
Q  185 agtttatttttgcttataata 205  Q
    |||| |||||| |||||||||    
T  17986225 agttgatttttacttataata 17986205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 26998798 - 26998678
Alignment:
Q  88 tattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| ||| |||||||||||||| | ||| ||| ||||||||| ||||||  |||||||| ||| |||||||||||||||||  ||  || |||||||     
T  26998798 tattataagtaaaaattaactttttaaatttatttattaaatgatgtatttggtcaataatgtagaccaaatacatcatttaataaataaacctaaaaaa 26998699  T
Q  187 tttatttttgcttataatagt 207  Q
    || ||||||| ||||||||||    
T  26998698 ttaatttttgtttataatagt 26998678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 5888467 - 5888345
Alignment:
Q  86 actattacaagcaaaaattaacttt-tagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| ||||||||||  ||||| |||||||||||| | ||||| |||| |  ||  || ||||| | | ||||||||||||| ||| ||||||||||    
T  5888467 actattataagcaaaaatctactttgtagattcattcaattaatgatgtatatggtctttattatagacaacatacatcatttaatgaatgaatctaaaa 5888368  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||| ||||||||||||||||||    
T  5888367 cgttaatttttgcttataatagt 5888345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 2627206 - 2627303
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataata 205  Q
    ||||||||||||||| ||||| | ||||||  |||||||||||| | ||||||| ||||||  ||| |||  ||||||||| ||||||||| ||||||    
T  2627206 ttttagattcattcaataaataatgtatttggtcaataatatagactaaatacaccatttattgaatgaacttaaaaagttaatttttgctaataata 2627303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 6189682 - 6189763
Alignment:
Q  124 taaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataata 205  Q
    ||||||| ||||||  |||||||||||| | ||||||||||||||  ||| |||||||||| ||| ||||||| ||||||||    
T  6189682 taaatgatgtatttggtcaataatatagactaaatacatcatttattgaatgaatctaaaacgttgatttttgtttataata 6189763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 7484746 - 7484649
Alignment:
Q  88 tattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||| |||||||||| ||| ||||||||||||||||||||||| |||| |  || |||||| || | | ||||||||||||| ||| ||||||||||    
T  7484746 tattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatctaaaa 7484649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 27502910 - 27503030
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||| |||| | ||  |||||| || | | ||| || |||| | ||| | ||||||||    
T  27502910 actattataagcaaaaattaacattttaaattcattcattaaatgatgtatgtgatttataataaagactacatatattattttatgaatgtatctaaaa 27503009  T
Q  185 agtttatttttgcttataata 205  Q
     ||| ||||||||||||||||    
T  27503010 tgttgatttttgcttataata 27503030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 13964527 - 13964428
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| | ||||||| |||  |  || ||||||||| ||| ||||||||||||  ||| |||| ||||| ||| ||||||||||||||||||    
T  13964527 ttttagattcattgagtaaatgatgtacatggtctataatatagaccacatacatcatttattgaatgaatttaaaatgttgatttttgcttataatagt 13964428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 223
Target Start/End: Original strand, 26998669 - 26998816
Alignment:
Q  77 cattcggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacg 175  Q
    |||||||| ||||||| || |||||||||| |||| || || ||| ||||||||| ||||||  || | | ||| | |||||||||||||||||  ||      
T  26998669 cattcggtcactattataaacaaaaattaattttttaggtttatttattaaatgatgtatttggtctacattattgaccaaatacatcatttaataaata 26998768  T
Q  176 aatctaaaaagtttatttttgcttataatagtaactgaagggagtata 223  Q
    ||| ||||||||| |||||| ||||||||| | ||  |||||||||||    
T  26998769 aatttaaaaagttaatttttacttataataatgaccaaagggagtata 26998816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 33070197 - 33070296
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||||||||||| |||| || || |||||| || ||| ||||| |||| || ||| |||||||||| |   | ||||||||||||||||    
T  33070197 ttttagattcattcattaaatgatgtatgtagtctataataaagaccatatacaccattaaatgaatgaatctaaaatgcaaaattttgcttataatagt 33070296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 10934684 - 10934734
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| ||| |||||||||| ||| ||||||||||||||||||    
T  10934684 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagt 10934734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 13841844 - 13841910
Alignment:
Q  73 actccattcggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtattta 138  Q
    |||||||||||| ||||||| ||||||||||| || ||||| ||||||||| ||||||| |||||||    
T  13841844 actccattcggtcactattataagcaaaaatttactttttaaattcattcaataaatgatgtattta 13841910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 2627296 - 2627183
Alignment:
Q  95 agcaaaaattaacttttaga-ttcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttattt 193  Q
    |||||||||||||||||  | |||||||| ||||||  ||||||| || ||| ||| | |||||||||| |||||  ||| ||||||||||||||   ||    
T  2627296 agcaaaaattaactttttaagttcattcaataaatggtgtatttagtctatattattgaccaaatacattatttattgaatgaatctaaaaagttatctt 2627197  T
Q  194 ttgcttataatagt 207  Q
     |||||||||||||    
T  2627196 atgcttataatagt 2627183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 6189763 - 6189682
Alignment:
Q  88 tattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcattta 168  Q
    ||||| || ||||||| ||| ||||||||||||||| ||||||| ||||||| || ||| ||| | ||||||||||||||||    
T  6189763 tattataaacaaaaatcaacgttttagattcattcaataaatgatgtatttagtctatattattgaccaaatacatcattta 6189682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 31271543 - 31271663
Alignment:
Q  88 tattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| ||| ||||||||| |||| || |||| ||| ||||||| ||| || |||||||||| || | |||||||||| |||  |||  ||| | |||||    
T  31271543 tattataagtaaaaattaatttttcaggttcaatcaataaatgatgtagttgatcaataatacagactaaatacatcacttattgaataaatttgaaaag 31271642  T
Q  187 tttatttttgcttataatagt 207  Q
    || ||||||||||||||||||    
T  31271643 ttgatttttgcttataatagt 31271663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 8688441 - 8688366
Alignment:
Q  87 ctattacaagcaaaaattaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacat 162  Q
    |||||| |||||||||| |  ||||||||| ||| | ||| ||| |||||| ||| ||||||||||||||||||||    
T  8688441 ctattataagcaaaaatcattttttagatttattgaataagtgatgtatttgatctataatataggccaaatacat 8688366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 10934739 - 10934684
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    |||| ||||||| |||||||||| ||| ||||||||||||||||||||||| ||||    
T  10934739 cggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtat 10934684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 24820433 - 24820307
Alignment:
Q  81 cggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||||  ||||| ||||||||||| ||||||| |||| | |||  || ||||  ||| ||||||||||||  ||| ||| |    
T  24820433 cggtcactattataagcaaaaattctctttttagattcattcaataaatgatgtatgtgatcttta-tataaaccacatacatcatttattgaatgaacc 24820335  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    ||| ||||  ||||||||||||||||||    
T  24820334 taagaagtgaatttttgcttataatagt 24820307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 13841909 - 13841843
Alignment:
Q  155 aaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagta 221  Q
    ||||||||||||||  ||| |||| ||||||||  |||||||||||||||||| || ||| ||||||    
T  13841909 aaatacatcatttattgaatgaatttaaaaagtaaatttttgcttataatagtgaccgaatggagta 13841843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 24017727 - 24017849
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||||| | ||||| |||| |||| | ||||| |||| | |||  || || || ||| |||||||||||||  ||  |||||||||    
T  24017727 actattataagcaaaaattaccattttaaattccttcaattaatgatgtatatgatctttattacagaccacatacatcatttaattaataaatctaaaa 24017826  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||| ||||||||||||||||||    
T  24017827 tgttgatttttgcttataatagt 24017849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 27502960 - 27502910
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| ||| |||| ||||| ||| ||||||||||||||||||    
T  27502960 atacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagt 27502910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 9879023 - 9878946
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    ||||||||||||||||||||| |||||| || ||  || ||||| | | |||||| |||||| ||| |||||||||||    
T  9879023 ttttagattcattcattaaataacgtatgtagtctttattatagactacatacataatttaatgaatgaatctaaaaa 9878946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 11335626 - 11335573
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaac 210  Q
    ||||||||||||| ||| |||||||||| ||  | |||||||||||||||||||    
T  11335626 atacatcatttaatgaatgaatctaaaatgtaaagttttgcttataatagtaac 11335573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 2116660 - 2116712
Alignment:
Q  175 gaatctaaaaagtttatttttgcttataatagtaactgaagggagtataaatt 227  Q
    |||||||||| ||  ||||||||||||||||||||||| |||| |||| ||||    
T  2116660 gaatctaaaacgtagatttttgcttataatagtaactggagggtgtattaatt 2116712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 209
Target Start/End: Complemental strand, 24017849 - 24017725
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||| ||||||||| ||| ||||||||| |||| |  ||  ||||| ||  || |||||||||| |  ||| |||| |||||    
T  24017849 actattataagcaaaaatcaacattttagatttattaattaaatgatgtatgtggtctgtaataaagatcatatacatcattaattgaaggaatttaaaa 24017750  T
Q  185 agtttatttttgcttataatagtaa 209  Q
     | | ||||||||||||||||||||    
T  24017749 tggtaatttttgcttataatagtaa 24017725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 41753827 - 41753767
Alignment:
Q  147 tataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||||||||||||| ||| |||| ||||| ||| | ||||||||||||||||    
T  41753827 tatagaccacatacatcatttaatgaatgaatttaaaatgttgaattttgcttataatagt 41753767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 79 - 210
Target Start/End: Complemental strand, 28752217 - 28752085
Alignment:
Q  79 ttcggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaa 177  Q
    |||||| ||||||| ||||||||||||| |||| | |||||||||||||||||  |||||  |||||||||||| ||||||||||||||||| ||| |||    
T  28752217 ttcggttactattataagcaaaaattaattttttacattcattcattaaatgatatatttggtcaataatatagaccaaatacatcatttaatgaatgaa 28752118  T
Q  178 tctaaaaagtttatttttgcttataatagtaac 210  Q
      ||||||||| | |||||||||||||| ||||    
T  28752117 attaaaaagttaacttttgcttataataataac 28752085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 28752090 - 28752219
Alignment:
Q  88 tattacaagcaaaaattaacttttagatt-cattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| |||||||| |||||||||  ||| |||||||||||||| ||||||  || ||| ||| | ||||||| ||||||||| ||| |||| ||||||     
T  28752090 tattataagcaaaagttaactttttaatttcattcattaaatgatgtatttggtctatattattgaccaaatatatcatttaatgaatgaatgtaaaaaa 28752189  T
Q  187 tttatttttgcttataatagtaactgaagg 216  Q
    || ||||||||||||||||||||| |||||    
T  28752190 ttaatttttgcttataatagtaaccgaagg 28752219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 10422944 - 10422817
Alignment:
Q  81 cggtgactattacaagcaaaaatt-aacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| |||| || ||||||||||| || |||||||||||||||||||||||||||| ||| |  || ||||| | | |||| |||||||||||| |||||    
T  10422944 cggtcactaatataagcaaaaatttaatttttagattcattcattaaatgacgtatgtaaactttattatagactacatacgtcatttaacgaatgaatc 10422845  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    |||||| |  ||||||||||||| ||||    
T  10422844 taaaaattaaatttttgcttatattagt 10422817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 31115618 - 31115749
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| ||||||| |||||| |||||||||||| |||||||||| |||| || ||  || ||||| ||| |||||| |||||| ||| ||| ||||||    
T  31115618 actattataagcaaagattaacattttagattcatccattaaatgatgtatatattctttattatagaccacatacataatttaatgaatgaagctaaaa 31115717  T
Q  185 agtttatttttgcttataatagtaactgaagg 216  Q
     ||| |||||||||||||||||| || |||||    
T  31115718 tgttgatttttgcttataatagtgaccgaagg 31115749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 199
Target Start/End: Original strand, 43813129 - 43813248
Alignment:
Q  81 cggtgactattacaagcaaaaatt-aacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||||||||||| || ||||||||||||||| ||||||| |||| || || ||||||| | ||| ||||||||||||  ||| |||||    
T  43813129 cggtcactattataagcaaaaatttaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaatc 43813228  T
Q  180 taaaaagtttatttttgctt 199  Q
    ||| ||||| ||||||||||    
T  43813229 taagaagttgatttttgctt 43813248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 29168374 - 29168488
Alignment:
Q  88 tattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    |||||||||||||||| ||||||| || |||||| ||||||| | ||||||  |||||||||| |  |||||||||||||||| ||| |||  |||||||    
T  29168374 tattacaagcaaaaatcaactttttaggttcatttattaaataatgtatttggtcaataatatggatcaaatacatcatttaaagaatgaacataaaaag 29168473  T
Q  187 tttatttttgcttat 201  Q
    || ||||||||||||    
T  29168474 ttgatttttgcttat 29168488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 7701319 - 7701197
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||| |||||||| |||||||||||||| |||| || ||  || ||||  ||  ||||||||||||| ||| ||||||||||    
T  7701319 actattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaa 7701220  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||  ||||||||||||||||||    
T  7701219 tgtagatttttgcttataatagt 7701197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 207
Target Start/End: Complemental strand, 43813252 - 43813134
Alignment:
Q  90 ttacaagcaaaaattaactt-ttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtt 188  Q
    |||||||||||||| ||||| ||||||||||||| ||||||| |||| |  |||||| ||||| | | |||| |||||||  ||| ||||||||||| |     
T  43813252 ttacaagcaaaaatcaacttcttagattcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaatta 43813153  T
Q  189 tatttttgcttataatagt 207  Q
     ||||||||||||||||||    
T  43813152 aatttttgcttataatagt 43813134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 7701192 - 7701319
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||||||||||  || ||||||||||||||||||||||| ||||    |  |||||| || | | ||||||||||||| ||| | |||    
T  7701192 cggtcactattataagcaaaaatctacattttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaatgtatc 7701291  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||||||||||||||||||    
T  7701292 taaaacgttgatttttgcttataatagt 7701319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 10422812 - 10422939
Alignment:
Q  81 cggtgactattacaagcaaaaatt-aacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| |||| || ||||||||||| || |||||||||||||| ||||||||||||| || || |||||| ||   | |||| |||||||| ||| |||||    
T  10422812 cggtcactaatataagcaaaaatttaatttttagattcattcgttaaatgacgtatgtagtctataataaagtttacatacgtcatttaatgaatgaatc 10422911  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    |||||| |  ||||||||||||| ||||    
T  10422912 taaaaattaaatttttgcttatattagt 10422939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 2943348 - 2943211
Alignment:
Q  81 cggtgactattacaagcaaaaa-ttaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||||||||| |||  ||||| ||||||||| | ||| | |||| || ||  || | ||| ||| ||||||||||||| ||| |||||    
T  2943348 cggtcactattataagcaaaaaattatattttacattcattcaattaataatgtatgtactctttattgtagaccacatacatcatttaatgaatgaatc 2943249  T
Q  180 taaaaagtttatttttgcttataatagtaactgaaggg 217  Q
    ||||| ||| |||||||||||||||||| || ||||||    
T  2943248 taaaatgttgatttttgcttataatagtgaccgaaggg 2943211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 205
Target Start/End: Complemental strand, 8169232 - 8169108
Alignment:
Q  81 cggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||| ||||||||| ||||||||||| ||||||| |||| || || ||| ||||| ||| ||||||||||||  ||| ||| |    
T  8169232 cggttactattataagcaaaagttaactttttagattcattcaataaatgatgtatgtagtctata-tatagaccacatacatcatttattgaatgaacc 8169134  T
Q  180 taaaaagtttatttttgcttataata 205  Q
    |||||||   | ||||||||||||||    
T  8169133 taaaaagccaacttttgcttataata 8169108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 34478302 - 34478366
Alignment:
Q  143 ataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||| ||||||||||||||||   || ||||||||||| || ||||||||||||||||||    
T  34478302 ataatatagaccaaatacatcatttagtaaatgaatctaaaaaattaatttttgcttataatagt 34478366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 8571414 - 8571513
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||||||||||||||||||||| ||| || || |||||| || | | ||||||||||||| ||| |||| ||||||    ||||||||||||| ||||    
T  8571414 ttttagattcattcattaaatgacatatgtagtctataataaagtctacatacatcatttaatgaatgaatttaaaaatcaaatttttgcttatattagt 8571513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 10095723 - 10095778
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  10095723 cggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtat 10095778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 10095787 - 10095728
Alignment:
Q  148 ataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||| ||| ||||||||||||| ||| |||||||||| ||| ||||||||||||||||||    
T  10095787 atagaccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagt 10095728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 23818483 - 23818428
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactg 212  Q
    ||||||||||||| ||| |||||||||| ||| |||||||||||||||||| ||||    
T  23818483 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgactg 23818428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 23818433 - 23818496
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataata 148  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||||| |||| ||||| ||||||    
T  23818433 actattataagcaaaaatcaacattttagattcattcattaaatgatgtatataatctataata 23818496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 25245224 - 25245291
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagtataa 224  Q
    ||||||||||||| ||| |||||||||| ||| |||||||||||||||||| || | |||| ||||||    
T  25245224 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccggagggtgtataa 25245291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 8169129 - 8169230
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||| |||||||| ||||||| |||| |  || ||| ||||| | | ||||||||||||  ||| |||||||||||||| | ||||||||||||||||    
T  8169129 ttttaggttcattcaataaatgatgtatgtggtctata-tatagactacatacatcatttattgaatgaatctaaaaagttaacttttgcttataatagt 8169227  T
Q  208 aac 210  Q
    |||    
T  8169228 aac 8169230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 23797350 - 23797456
Alignment:
Q  79 ttcggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaa 177  Q
    |||||| ||||||| |||||||| ||  | ||||||||||||||||||||||| |||| || || |||||| || ||| |||||||||| |  ||| |||    
T  23797350 ttcggtcactattataagcaaaattttgcattttagattcattcattaaatgatgtatgtagtctataataaagaccagatacatcattaattgaatgaa 23797449  T
Q  178 tctaaaa 184  Q
    |||||||    
T  23797450 tctaaaa 23797456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 25774182 - 25774320
Alignment:
Q  77 cattcggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacg 175  Q
    |||||||| ||||||| |||||||| ||| | ||||| |||||||||   |||||  ||| || ||  || ||||| | | ||||||||||||  ||| |    
T  25774182 cattcggtcactattataagcaaaagttatcattttatattcattcaagtaatgatttatgtagtctttattatagactacatacatcatttagtgaatg 25774281  T
Q  176 aatctaaaaagtttatttttgcttataatagtaactgaa 214  Q
    ||||||||| || ||||||||||||||||||| ||||||    
T  25774282 aatctaaaatgtgtatttttgcttataatagtgactgaa 25774320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 2360481 - 2360558
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    |||||||||||||||||||||||||||| || || |||||| || ||| |||| | ||||||  || |||||||||||    
T  2360481 ttttagattcattcattaaatgacgtatgtagtctataataaagtccacatacgttatttaataaatgaatctaaaaa 2360558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 2943214 - 2943271
Alignment:
Q  79 ttcggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    |||||| ||||||| |||||||||| ||| ||||||||||||||||||||||| ||||    
T  2943214 ttcggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtat 2943271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 26824910 - 26824966
Alignment:
Q  81 cggtgactattacaagcaaaaatt-aacttttagattcattcattaaatgacgtatt 136  Q
    |||| |||| || ||||||||||| || |||||||||||||||||||||||||||||    
T  26824910 cggtcactagtataagcaaaaatttaatttttagattcattcattaaatgacgtatt 26824966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 208
Target Start/End: Complemental strand, 30138896 - 30138796
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||| | ||||| |||| || ||  || ||||| ||| | ||||||||||| ||| ||||| |||| ||| |||||||||||||| |||    
T  30138896 ttttagattcattcaattaatgatgtatatagtctttattatagaccacacacatcatttaatgaatgaatccaaaatgttgatttttgcttataaaagt 30138797  T
Q  208 a 208  Q
    |    
T  30138796 a 30138796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 5950330 - 5950275
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    |||| ||||||| ||||||||| |||| ||||||||||||||||||||||| ||||    
T  5950330 cggtcactattataagcaaaaactaacattttagattcattcattaaatgatgtat 5950275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 8595179 - 8595278
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||||||||||| |||| || || |||||| | || | ||||||||||||| ||| ||||  |||||    ||||||||||||| ||||    
T  8595179 ttttagattcattcattaaatgatgtatgtagtctataataaatgctacatacatcatttaatgaatgaattcaaaaatcaaatttttgcttatattagt 8595278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 12274945 - 12274818
Alignment:
Q  81 cggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||||||||||  |||||| ||||||||||| || || | |||| |  || ||| ||||||||| ||||||||||||  ||| |||      
T  12274945 cggtaactattataagcaaaaatgtactttttagattcattcaatatataatgtatgtggtctatattataggccacatacatcatttattgaatgaaca 12274846  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    ||||| ||  ||||||||||||||||||    
T  12274845 taaaatgtggatttttgcttataatagt 12274818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 25245279 - 25245224
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    |||| ||||||| |||||||||| ||| ||||||||||||||||||||||| ||||    
T  25245279 cggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtat 25245224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 41404019 - 41404074
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    |||| ||||||| |||||||||||| | ||||||||||||||||||||||| ||||    
T  41404019 cggtcactattataagcaaaaattatcattttagattcattcattaaatgatgtat 41404074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 5950275 - 5950325
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| ||| |||||||||| |||  |||||||||||||||||    
T  5950275 atacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagt 5950325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 8127906 - 8127972
Alignment:
Q  155 aaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagta 221  Q
    ||||||||||||||  ||| ||||||||| |||| ||||||| |||||||||| || | ||||||||    
T  8127906 aaatacatcatttattgaatgaatctaaacagttgatttttgtttataatagtgaccggagggagta 8127972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 12274818 - 12274940
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| ||||||||||  || |||||  |||||||| ||||||| |||| |   | ||||||||| ||| |||||| || ||  ||| ||||||||||    
T  12274818 actattataagcaaaaatccacattttatgttcattcaataaatgatgtatgtggcctataatatagaccacatacattatatattgaatgaatctaaaa 12274917  T
Q  185 agtttatttttgcttataatagt 207  Q
    |||  ||||||||||||||||||    
T  12274918 agtacatttttgcttataatagt 12274940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 41404074 - 41404024
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| ||| |||||||||| | | ||||||||||||||||||    
T  41404074 atacatcatttaatgaatgaatctaaaatgataatttttgcttataatagt 41404024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 25486734 - 25486827
Alignment:
Q  94 aagcaaaaattaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagt 187  Q
    ||||||||||||  |||||| |||||||||| |||||||||| |  |  ||||||| | ||| |||||||||| || ||| ||| |||||||||    
T  25486734 aagcaaaaattactttttaggttcattcatttaatgacgtatatggtacataatatggaccacatacatcattaaatgaatgaacctaaaaagt 25486827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 32549929 - 32549869
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcattta 168  Q
    ||||||||||||||| ||||||| |||| | |||  |||||||| ||| ||||||||||||    
T  32549929 ttttagattcattcaataaatgatgtatgtgatctttaatatagaccacatacatcattta 32549869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 36886 - 36988
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||||||||||| ||||||  ||||||| ||||  |||||||||||||||| ||| |||||||||| ||| ||||||| |||||||| |    
T  36886 ttttagattcattcattaaatgatgtatttggtcaataacatagatcaaatacatcatttaatgaatgaatctaaaatgttgatttttgtttataataat 36985  T
Q  208 aac 210  Q
    |||    
T  36986 aac 36988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 88 - 195
Target Start/End: Complemental strand, 36983 - 36875
Alignment:
Q  88 tattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| || ||||||| ||| ||||||||||||||||||||||| |||||| ||| ||  ||| | ||||||||||||||||| ||| ||||||||||||    
T  36983 tattataaacaaaaatcaacattttagattcattcattaaatgatgtatttgatctatgttattgaccaaatacatcatttaatgaatgaatctaaaaag 36884  T
Q  187 tttattttt 195  Q
    || ||||||    
T  36883 ttgattttt 36875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 39180 - 39238
Alignment:
Q  147 tataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataata 205  Q
    ||||| ||| ||||||||||||| ||| ||||||||||  || ||||||||||||||||    
T  39180 tatagaccatatacatcatttaatgaatgaatctaaaattttgatttttgcttataata 39238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 8e-21; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 331934 - 331808
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||  || ||||| ||| |||||||||||||  ||  |||     
T  331934 cggtcactattataagcaaaaattaacattttagattcattcattaaatgatgtatataatctttattatagaccacatacatcatttaatcaataaat- 331836  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||||||||||||||||||    
T  331835 taaaatgttgatttttgcttataatagt 331808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 39579561 - 39579641
Alignment:
Q  144 taatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagtataa 224  Q
    |||||||| | |||||||||| |||||||| |||||||||||||| |||||||||||||||||| |  |||||||||||||    
T  39579561 taatatagactaaatacatcacttaacgaatgaatctaaaaagttgatttttgcttataatagtgatcgaagggagtataa 39579641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 7823876 - 7823998
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||| || |||| ||||||||||||| ||||||||| |||||| ||| ||||||  | ||| ||||||||||||| | | ||||||||||    
T  7823876 actattataagcaataaataacattttagattcatttattaaatgatgtatttgatctataataatgaccatatacatcatttaatggatgaatctaaaa 7823975  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||| ||||| ||||||||||||    
T  7823976 tgttaattttagcttataatagt 7823998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 29241491 - 29241609
Alignment:
Q  88 tattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| |||||||||| || |||| || |||||| | ||||||| | |||| |||| |||||||| ||||||||||||||||  ||| ||||||||||||    
T  29241491 tattataagcaaaaatcaattttttaggttcatttaataaatgatgcatttgatcagtaatatagaccaaatacatcatttattgaatgaatctaaaaag 29241590  T
Q  187 tttatttttgcttataata 205  Q
    || ||||| ||||||||||    
T  29241591 ttgattttggcttataata 29241609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 54595925 - 54595799
Alignment:
Q  81 cggtgactattacaagcaaaaattaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatct 180  Q
    |||| ||||||| ||| ||||||  | ||||||||||||||||||||||| |||| |  ||  || ||| | ||| ||||||||||||| ||| ||||||    
T  54595925 cggtcactattataagtaaaaatataattttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatct 54595826  T
Q  181 aaaaagtttatttttgcttataatagt 207  Q
    |||| ||| ||||||||||||||||||    
T  54595825 aaaatgttgatttttgcttataatagt 54595799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 207
Target Start/End: Complemental strand, 12745039 - 12744910
Alignment:
Q  79 ttcggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaa 177  Q
    |||||| ||||||| |||||||||||||| |||||||| |||||||||||||| |||| |  || |||||| || ||| |||||||||| |  ||| |||    
T  12745039 ttcggtcactattataagcaaaaattaacattttagatacattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaa 12744940  T
Q  178 tctaaaaagtttatttttgcttataatagt 207  Q
    ||||||| ||   |||||||||||||||||    
T  12744939 tctaaaatgtaagtttttgcttataatagt 12744910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 40470526 - 40470417
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||||||||||||||||||||||||| || || |||||| || | | |||| |||||||| ||| ||||||||||| |  ||||||||||||| ||||    
T  40470526 ttttagattcattcattaaatgacgtatgtagtctataataaagactacatacgtcatttaatgaatgaatctaaaaattaaatttttgcttatattagt 40470427  T
Q  208 aactgaaggg 217  Q
     || ||||||    
T  40470426 gaccgaaggg 40470417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 207
Target Start/End: Original strand, 54595789 - 54595920
Alignment:
Q  76 ccattcggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaac 174  Q
    |||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||| |||| |  || |||||| || | | ||||||||||||| |||     
T  54595789 ccatacggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaat 54595888  T
Q  175 gaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||| |||| | ||||||| |||||||||||    
T  54595889 gaatct-aaaattatatttttacttataatagt 54595920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 27224716 - 27224589
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||||| | ||||||||| ||||||||||||| |||| ||||   || |||||  || ||||||||||||| |||  ||||    
T  27224716 cggttactattataagcaaaaattagcattttagattgattcattaaatgatgtatataatttttattatagatcacatacatcatttaatgaataaatc 27224617  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||||||| ||||||||||    
T  27224616 taaaatgttgatttttgtttataatagt 27224589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 7823998 - 7823876
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||| ||||||||| |||||||||||| |||||||||| |||| |  ||| || |||||  ||||||||||||||||  || ||||||||||    
T  7823998 actattataagctaaaattaacattttagattcatccattaaatgatgtatatggtcattattatagatcaaatacatcatttaataaatgaatctaaaa 7823899  T
Q  185 agtttatttttgcttataatagt 207  Q
     |||  || ||||||||||||||    
T  7823898 tgttatttattgcttataatagt 7823876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 12744905 - 12745042
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||||||||| | || ||||||||||||||| | ||||| |||| |  ||  || ||||| ||| ||||||||||||| ||| | |||    
T  12744905 cggtcactattataagcaaaaacttacattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgtatc 12745004  T
Q  180 taaaaagtttatttttgcttataatagtaactgaaggg 217  Q
    ||||| ||| |||||||||||||||||| || ||||||    
T  12745005 taaaatgttaatttttgcttataatagtgaccgaaggg 12745042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 37897693 - 37897813
Alignment:
Q  88 tattacaagcaaaaat-taacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| |||||||||| ||| ||||||||||||||| | ||||| |||| | |||  || ||||| ||| |||||| |||||| ||| |||| ||||| |    
T  37897693 tattataagcaaaaatctaaattttagattcattcaattaatgatgtatatgatctttattatagaccacatacataatttaatgaatgaatttaaaatg 37897792  T
Q  187 tttatttttgcttataatagt 207  Q
    || ||||||||||||||||||    
T  37897793 ttgatttttgcttataatagt 37897813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 52866537 - 52866423
Alignment:
Q  97 caaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagt---ttatt 192  Q
    ||||||||||| ||||||||||||||||||||| |  ||| |||||  || ||||| ||| ||||||||||||| ||| |||||||||| ||   || ||    
T  52866537 caaaaattaacattttagattcattcattaaataatatatataatctttattatagaccacatacatcatttaatgaatgaatctaaaatgttaattttt 52866438  T
Q  193 tttgcttataatagt 207  Q
    |||||||||||||||    
T  52866437 tttgcttataatagt 52866423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 40470420 - 40470527
Alignment:
Q  79 ttcggtgactattacaagcaaaaatt-aacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaa 177  Q
    |||||| |||| || ||||||||||| || |||||||||||||||||||||||||||| || ||  || ||||| | | |||| |||||||| ||| |||    
T  40470420 ttcggtcactaatataagcaaaaatttaatttttagattcattcattaaatgacgtatgtagtctttattatagactacatacgtcatttaatgaatgaa 40470519  T
Q  178 tctaaaaa 185  Q
    ||||||||    
T  40470520 tctaaaaa 40470527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 41743659 - 41743596
Alignment:
Q  147 tataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaac 210  Q
    ||||| ||| ||||||||||||| ||||||||||||||  || |||||||||||||||||||||    
T  41743659 tatagaccatatacatcatttaatgaacgaatctaaaatattaatttttgcttataatagtaac 41743596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 52215884 - 52216011
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||||||||||| || |||||||||||| || |  |||| |||| | |||  || ||||| ||| ||||||||||||| ||  |||||    
T  52215884 cggtcactattataagcaaaaatttacattttagattcatgcaattgatgatgtatatgatctttattatagaccacatacatcatttaatgagtgaatc 52215983  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||||||||||||||||||    
T  52215984 taaaatgttgatttttgcttataatagt 52216011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 331803 - 331929
Alignment:
Q  81 cggtgactattacaagcaaaaattaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatct 180  Q
    |||| ||||||| |||||||||| ||| |||  ||| ||| ||||||||| |||| |  || |||||| ||   | ||||||||||||| ||| ||||||    
T  331803 cggtcactattataagcaaaaatcaacattttaatttattgattaaatgatgtatgtggtctataataaagattatatacatcatttaatgaatgaatct 331902  T
Q  181 aaaaagtttatttttgcttataatagt 207  Q
    |||| ||| ||||||||||||||||||    
T  331903 aaaatgttaatttttgcttataatagt 331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 21217297 - 21217175
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||| ||||||||  ||||||||||||| |||| || ||  || ||||  ||  ||||||||||||| ||| ||||||||||    
T  21217297 actattataagcaaaaatcaacgttttagatatattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaa 21217198  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||  ||||||||||||||||||    
T  21217197 tgtagatttttgcttataatagt 21217175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 27224584 - 27224714
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| || ||||||| ||| ||||||||| ||||||||||||| |||| | ||| |||||| |    | ||||||||||||| |||  ||||    
T  27224584 cggtcactattataaacaaaaatcaacattttagatttattcattaaatgatgtatgtgatctataataaaaattatatacatcatttaatgaatcaatc 27224683  T
Q  180 taaaaagtttatttttgcttataatagtaac 210  Q
    ||||| | | |||||||||||||||||||||    
T  27224684 taaaatgctaatttttgcttataatagtaac 27224714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 24722756 - 24722680
Alignment:
Q  147 tataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagtata 223  Q
    ||||| ||| |||||||||||||  || ||||||||||  || |||||||||||||||||| ||||||||| |||||    
T  24722756 tatagaccacatacatcatttaataaatgaatctaaaatattaatttttgcttataatagtgactgaagggtgtata 24722680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 36344405 - 36344481
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||||||| |||||||||||  ||| | |||||||||| || ||| ||||||||||||| ||| ||||||||||    
T  36344405 ttttagattcaatcattaaatgatatatgtgatcaataataaagaccacatacatcatttaatgaatgaatctaaaa 36344481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 41254060 - 41253940
Alignment:
Q  88 tattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| |||||||||| ||| |||||||| |||| ||||||||| |||| ||||   || ||||  ||| ||||||||||||| ||| |||| ||||| |    
T  41254060 tattataagcaaaaatcaacattttagatacatttattaaatgatgtatgtaatatttattataaaccacatacatcatttaatgaatgaatataaaatg 41253961  T
Q  187 tttatttttgcttataatagt 207  Q
    || ||||||| ||||||||||    
T  41253960 ttgatttttgattataatagt 41253940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 22497019 - 22496944
Alignment:
Q  148 ataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagtata 223  Q
    |||| ||| ||||||||||||| ||| ||||||||||  || |||||||||||||||||| |||| |||| |||||    
T  22497019 atagaccacatacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgactggagggtgtata 22496944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 10872681 - 10872803
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||  ||||| ||||||||||||||||| |||| | ||  |||||| || ||| |||||||||| |  ||| ||||||||||    
T  10872681 actattataagcaaaaatcaatattttaaattcattcattaaatgatgtatgtgatttataataaagaccatatacatcattaattgaatgaatctaaaa 10872780  T
Q  185 agtttatttttgcttataatagt 207  Q
      |  ||||||||||||||||||    
T  10872781 tataaatttttgcttataatagt 10872803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 7882285 - 7882340
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    |||| ||||||| |||||||||||||| ||||||||||||| ||||||||| ||||    
T  7882285 cggtcactattataagcaaaaattaacattttagattcattaattaaatgatgtat 7882340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 40639781 - 40639840
Alignment:
Q  148 ataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||| ||| ||||||||||||| ||| |||| ||||| ||| ||||||||||||||||||    
T  40639781 atagaccacatacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagt 40639840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 40639845 - 40639790
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    |||| ||||||| |||||||||||||| ||||| ||||||||||||||||| ||||    
T  40639845 cggtcactattataagcaaaaattaacattttaaattcattcattaaatgatgtat 40639790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 48191719 - 48191774
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    |||| ||||||| || ||||||||||| ||||||||||||||||||||||| ||||    
T  48191719 cggtcactattataaacaaaaattaacattttagattcattcattaaatgatgtat 48191774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 7882340 - 7882290
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||||||||||  || |||||||||| ||| ||||||||||||||||||    
T  7882340 atacatcatttaattaatgaatctaaaatgttaatttttgcttataatagt 7882290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 10872808 - 10872666
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||||||||||| |  ||||||||||||||| | ||||| |||| |  ||  || ||||   || ||||||||||||| ||| ||||     
T  10872808 cggtcactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattataaatcacatacatcatttaatgaatgaatt 10872709  T
Q  180 taaaaagtttatttttgcttataatagtaactgaagggagtat 222  Q
    |||||  || |||||||||||||||||| |||| |||| ||||    
T  10872708 taaaatattgatttttgcttataatagtgactggagggtgtat 10872666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 22496960 - 22497010
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  22496960 actattataagcaaaaattaatattttagattcattcattaaatgatgtat 22497010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 30519679 - 30519729
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| ||| |||||||||| |||  |||||||||||||||||    
T  30519679 atacatcatttaatgaatgaatctaaaatgttggtttttgcttataatagt 30519729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 41743599 - 41743721
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||||||  |||||||||| |||||||||||| |||| |  || |||||| || ||| |||||||||| |  ||| ||||| ||||    
T  41743599 actattataagcaaaaattaatattttagattcgttcattaaatgatgtatatggtctataataaagaccatatacatcattaactgaatgaatccaaaa 41743698  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||  | |||| |||||||||||    
T  41743699 tgtaaacttttacttataatagt 41743721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 48191774 - 48191724
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| ||| |||||||||| ||| ||||||| ||||||||||    
T  48191774 atacatcatttaatgaatgaatctaaaatgttaatttttgtttataatagt 48191724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 9170170 - 9170121
Alignment:
Q  158 tacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||||||||||||| |||||||||| ||   |||||||||||||||||    
T  9170170 tacatcatttaacgaatgaatctaaaatgtaattttttgcttataatagt 9170121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 44382850 - 44382943
Alignment:
Q  114 attcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||||| |||| |  |  |||||| || | | ||| ||||||||| ||| | |||||||| ||| ||||||||||||||||||    
T  44382850 attcattcattaaatgatgtatgtggtttataatacagactacatatatcatttaatgaatgtatctaaaacgttgatttttgcttataatagt 44382943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 2128431 - 2128507
Alignment:
Q  146 atataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagtat 222  Q
    |||||| ||| ||||||||||||  ||| ||||||||||  |  |||||||||||||||||| |||| |||| ||||    
T  2128431 atatagaccacatacatcatttattgaatgaatctaaaacatgaatttttgcttataatagtgactggagggtgtat 2128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 23444354 - 23444402
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataata 205  Q
    ||||||||||||| ||| |||||||||| ||| |||||||| |||||||    
T  23444354 atacatcatttaatgaatgaatctaaaatgttaatttttgcctataata 23444402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 23444394 - 23444354
Alignment:
Q  96 gcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    |||||||||||| ||||||||||||||||||||||| ||||    
T  23444394 gcaaaaattaacattttagattcattcattaaatgatgtat 23444354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 34327589 - 34327637
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataata 205  Q
    ||||||||||||| ||| |||||||||| ||| ||||||| ||||||||    
T  34327589 atacatcatttaatgaatgaatctaaaatgttaatttttgtttataata 34327637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 34327637 - 34327589
Alignment:
Q  88 tattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    ||||| || ||||||||||| ||||||||||||||||||||||| ||||    
T  34327637 tattataaacaaaaattaacattttagattcattcattaaatgatgtat 34327589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 37897813 - 37897693
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||| ||||| ||||||||||||||| | |||| |  || |||||| ||  || |||||||||| |  ||| ||||||||||    
T  37897813 actattataagcaaaaatcaacattttaaattcattcattaaattatgtatgtggtctataataaagatcatatacatcattaattgaatgaatctaaaa 37897714  T
Q  185 agtttatttttgcttataata 205  Q
      |  ||||||||||||||||    
T  37897713 tttagatttttgcttataata 37897693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 40639866 - 40639926
Alignment:
Q  147 tataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||||||||||||| |||  ||| ||||| ||| ||||||||||||||||||    
T  40639866 tatagaccacatacatcatttaatgaataaatttaaaatgttgatttttgcttataatagt 40639926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 52914015 - 52914129
Alignment:
Q  94 aagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatt 192  Q
    |||||||||||||| |||||||||||||||| |||||| |||| || ||  || ||||| ||| ||||||||||||| ||| ||||||||||  || |||    
T  52914015 aagcaaaaattaacattttagattcattcatgaaatgatgtatatagtctttattatagaccacatacatcatttaatgaatgaatctaaaatattaatt 52914114  T
Q  193 tttgcttataatagt 207  Q
    |||||||||||||||    
T  52914115 tttgcttataatagt 52914129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 94 - 205
Target Start/End: Original strand, 39533773 - 39533885
Alignment:
Q  94 aagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatt 192  Q
    |||||||||||||| ||||||||||||| ||||||||| |||| |||||  || |||||  || ||||||||||||| |||  ||||||||| ||| |||    
T  39533773 aagcaaaaattaacattttagattcatttattaaatgatgtatataatctttattatagatcacatacatcatttaatgaataaatctaaaatgttgatt 39533872  T
Q  193 tttgcttataata 205  Q
    |||||||||||||    
T  39533873 tttgcttataata 39533885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 52914129 - 52914007
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||| |||| |  || |||||| || | | ||||||||||| | ||| ||||||||||    
T  52914129 actattataagcaaaaattaatattttagattcattcattaaatgatgtatgtggtctataataaagactatatacatcatttcatgaatgaatctaaaa 52914030  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||| |||||||||||| |||||    
T  52914029 tgttaatttttgcttattatagt 52914007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 195
Target Start/End: Original strand, 2401051 - 2401159
Alignment:
Q  88 tattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| |||||||| ||||||||| | ||||||||| ||||||| ||||||  |||||||||||| | ||||||||||||||| |||  ||||||| |||    
T  2401051 tattataagcaaaagttaactttttaaattcattcaataaatgatgtatttggtcaataatatagactaaatacatcatttaatgaataaatctaataag 2401150  T
Q  187 tttattttt 195  Q
    || ||||||    
T  2401151 ttgattttt 2401159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 205
Target Start/End: Complemental strand, 2401159 - 2401051
Alignment:
Q  98 aaaaattaactt-ttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttg 196  Q
    |||||| ||||| ||||||| ||||||||||||| ||||||| || ||| ||| | ||||||||||||||||  ||| |||| ||||||||| | |||||    
T  2401159 aaaaatcaacttattagatttattcattaaatgatgtatttagtctatattattgaccaaatacatcatttattgaatgaatttaaaaagttaacttttg 2401060  T
Q  197 cttataata 205  Q
    |||||||||    
T  2401059 cttataata 2401051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 38381980 - 38382107
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||||||||||| || ||||||||||||| ||||||||| |||| |  |  |||||| || | | ||||||||||||| ||| | |||    
T  38381980 cggtcactattataagcaaaaatttacattttagattcattgattaaatgatgtatgtggtttataatacagactacatacatcatttaatgaatgtatc 38382079  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||||||||||||||||||    
T  38382080 taaaacgttgatttttgcttataatagt 38382107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 38382107 - 38381985
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||| |||||||| |||||||||||||| |||| || ||  || ||||  ||| |||||||||||||  || ||||||||||    
T  38382107 actattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccacatacatcatttaatcaatgaatctaaaa 38382008  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||  ||||||||||||||||||    
T  38382007 tgtaaatttttgcttataatagt 38381985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 46518558 - 46518468
Alignment:
Q  79 ttcggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcattta 168  Q
    |||||| | ||||| |||||||||||||||||| || || ||||| ||||||| ||||||| |||||||||||  ||||||||||||||||    
T  46518558 ttcggtcattattataagcaaaaattaactttttaggtttattcaataaatgatgtatttagtcaataatatataccaaatacatcattta 46518468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 55935992 - 55936118
Alignment:
Q  81 cggtgactattacaagcaaaaattaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatct 180  Q
    |||| ||||||| |||||||||   | ||||||||||||||||||||||| |||| |  ||  || ||| | ||| ||||||||||||| ||| ||||||    
T  55935992 cggtcactattataagcaaaaacataattttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatct 55936091  T
Q  181 aaaaagtttatttttgcttataatagt 207  Q
    ||||  || ||||||||||||||||||    
T  55936092 aaaatattgatttttgcttataatagt 55936118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 225
Target Start/End: Complemental strand, 19934769 - 19934629
Alignment:
Q  86 actattacaagcaaaaat-taacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||  ||||||||||||||| ||||||| |||| |  || || | |||| ||| ||||||||||||  ||| ||||||||||    
T  19934769 actattataagcaaaaatctattttttagattcattcaataaatgatgtatgtggtccattaaatagaccacatacatcatttattgaatgaatctaaaa 19934670  T
Q  185 agtttatttttgcttataatagtaactgaagggagtataaa 225  Q
    |||  | |||||||||||||||| || | |||| |||||||    
T  19934669 agtggaattttgcttataatagtgaccggagggtgtataaa 19934629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 207
Target Start/End: Original strand, 29006834 - 29006966
Alignment:
Q  76 ccattcggtgactattacaagcaaaaat-taacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaac 174  Q
    |||| |||| ||||||| |||||||||| ||  ||||||||||||||| ||||||| |||| | ||| || | |||| ||| ||||||||||||  |||     
T  29006834 ccatccggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtgatccattaaatagaccacatacatcatttattgaat 29006933  T
Q  175 gaatctaaaaagtttatttttgcttataatagt 207  Q
    |||| ||||||||  | ||||||||||||||||    
T  29006934 gaatttaaaaagtggaattttgcttataatagt 29006966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 207
Target Start/End: Complemental strand, 55936128 - 55935997
Alignment:
Q  76 ccattcggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaac 174  Q
    |||| |||| ||||||| |||||||||| ||  ||||||||||||||||||||||| |||| |  || |||||| || | | ||||||||||||| |||     
T  55936128 ccatacggtcactattataagcaaaaatcaatattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaat 55936029  T
Q  175 gaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||| |||| | | |||||||||||||||||    
T  55936028 gaatct-aaaattatgtttttgcttataatagt 55935997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 54164949 - 54164822
Alignment:
Q  81 cggtgactattacaagcaaaaat-taacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||| ||  ||||||||||||||| ||||||| |||| |  || || | |||| ||| ||||||||||||  ||| |||||    
T  54164949 cggtcactattataagcaaaaatctattttttagattcattcaataaatgatgtatgtggtccattaaatagaccacatacatcatttattgaatgaatc 54164850  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    ||||||||  | ||||||||||||||||    
T  54164849 taaaaagtggaattttgcttataatagt 54164822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 34616346 - 34616224
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||| |||||||| |||||||||||||| |||| || ||  || ||||  ||  ||||||||||||| ||| ||||||||||    
T  34616346 actattataagcaaaaatcaacgttttagatacattcattaaatgatgtatatagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaa 34616247  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||  ||||||| ||||||||||    
T  34616246 tgtagatttttgtttataatagt 34616224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 28702169 - 28702092
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    |||||| ||||||||||||||||||||| || || |||||| || | | ||||||||||||| ||| |||||||||||    
T  28702169 ttttaggttcattcattaaatgacgtatgtagtctataataaagactacatacatcatttaatgaatgaatctaaaaa 28702092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 200
Target Start/End: Complemental strand, 39533885 - 39533772
Alignment:
Q  88 tattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| |||||||||| ||| ||||||||| ||||||||||||| |||| | ||| |||||| ||   | |||||||||||||  || |||||||||| |    
T  39533885 tattataagcaaaaatcaacattttagatttattcattaaatgatgtatgtgatctataataaagattatatacatcatttaataaatgaatctaaaatg 39533786  T
Q  187 tttatttttgctta 200  Q
    || |||||||||||    
T  39533785 ttaatttttgctta 39533772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 47181689 - 47181568
Alignment:
Q  87 ctattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    |||||| |||||||||| ||| |||||||| |||||||||||||| |||| || ||  || ||||  ||  ||||||||||||| ||| |||| |||||     
T  47181689 ctattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatttaaaat 47181590  T
Q  186 gtttatttttgcttataatagt 207  Q
    ||  ||||||||||||||||||    
T  47181589 gtagatttttgcttataatagt 47181568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 48402421 - 48402542
Alignment:
Q  87 ctattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    |||||| |||||||||| ||| |||||||| |||||||||||||| |||| || ||  || ||||  ||  ||||||||||||| ||| ||||||||||     
T  48402421 ctattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaat 48402520  T
Q  186 gtttatttttgcttataatagt 207  Q
     |  ||||||||||||||||||    
T  48402521 atagatttttgcttataatagt 48402542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 48402542 - 48402421
Alignment:
Q  86 actattacaagcaaaaat-taacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||  ||||||||||||||||||||||| ||||    |  |||||| || | | ||||||||||||| ||| | ||||||||    
T  48402542 actattataagcaaaaatctatattttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaatgtatctaaaa 48402443  T
Q  185 agtttatttttgcttataatag 206  Q
     ||| |||||||||||||||||    
T  48402442 cgttgatttttgcttataatag 48402421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 56364336 - 56364457
Alignment:
Q  87 ctattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    |||||| |||||||||| ||| |||||||| |||||||||||||| |||| || ||  || ||||  ||  ||||||||||||| ||| ||||||||||     
T  56364336 ctattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaaat 56364435  T
Q  186 gtttatttttgcttataatagt 207  Q
    ||  |||||| |||||||||||    
T  56364436 gtagatttttacttataatagt 56364457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 34616247 - 34616346
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||||||||||| ||||    |  |||||| || | | ||||||||||||| ||| | |||||||| ||| ||||||||||||||||||    
T  34616247 ttttagattcattcattaaatgatgtatgcggtttataatacagactatatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagt 34616346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 4386430 - 4386317
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||||| |||||||  ||| || |  ||| ||||| ||| |||||||||||||  ||  ||||||||||||  | ||||||||||||||||    
T  4386430 ttttagattcattcaataaatgatctatgtagtttata-tatagaccacatacatcatttaataaattaatctaaaaagtcaacttttgcttataatagt 4386332  T
Q  208 aactgaagggagtat 222  Q
     |||| |||||||||    
T  4386331 gactggagggagtat 4386317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 223
Target Start/End: Complemental strand, 11796715 - 11796578
Alignment:
Q  86 actattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| ||||||||||| |||||| ||||| ||||| ||||||| |||| ||||| ||| ||||  ||| ||| |||||| |  ||| ||||| ||||    
T  11796715 actattataagcaaaaattcactttttagatttattcaataaatgatgtatgtaatctata-tataaaccacatatatcattcattgaatgaatcgaaaa 11796617  T
Q  185 agtttatttttgcttataatagtaactgaagggagtata 223  Q
    |||  | |||||||||||||||| || || |||||||||    
T  11796616 agtcaacttttgcttataatagtgaccgatgggagtata 11796578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 18488557 - 18488651
Alignment:
Q  113 gattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||||||| ||||||| |||| | ||| ||| || ||  || ||||||||||||||||  |||||||||| ||  ||||||||||||||||||    
T  18488557 gattcattcaataaatgatgtatgtgatctatattaaagatcacatacatcatttaacgattgaatctaaaatgtcgatttttgcttataatagt 18488651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 206
Target Start/End: Original strand, 47181563 - 47181689
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||||||||||  || ||||| ||||||||||||||||| ||||    |  |||||| || | | ||||||||||||| ||| | |||    
T  47181563 cggtcactattataagcaaaaatctacattttaaattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaatgtatc 47181662  T
Q  180 taaaaagtttatttttgcttataatag 206  Q
    ||||| ||| |||||||||||||||||    
T  47181663 taaaacgttgatttttgcttataatag 47181689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 56364434 - 56364336
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatag 206  Q
    ||||||||||||||||||||||| ||||    |  |||||| || | | ||||||||||||| ||| | |||||||| ||| |||||||||||||||||    
T  56364434 ttttagattcattcattaaatgatgtatgcggtttataatacagactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatag 56364336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 18626718 - 18626766
Alignment:
Q  86 actattacaagcaaaaattaacttttagattcattcattaaatgacgtat 135  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  18626718 actattataagcaaaaattaa-ttttagattcattcattaaatgatgtat 18626766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 21859590 - 21859513
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    ||||||||||||||||||||| |||||| ||  | |||||| || | | ||||||||||||| ||| |||||||||||    
T  21859590 ttttagattcattcattaaataacgtatgtagactataataaagactacatacatcatttaatgaatgaatctaaaaa 21859513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 21915453 - 21915376
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    ||||||||||||||||||||| |||||| ||  | |||||| || | | ||||||||||||| ||| |||||||||||    
T  21915453 ttttagattcattcattaaataacgtatgtagactataataaagactacatacatcatttaatgaatgaatctaaaaa 21915376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 25700489 - 25700566
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    ||||||||||||||| ||||||| |||| | ||| | ||||||| ||| ||||||||||||  ||| |||||||||||    
T  25700489 ttttagattcattcagtaaatgatgtatgtgatctacaatatagaccacatacatcatttattgaatgaatctaaaaa 25700566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 2582819 - 2582939
Alignment:
Q  88 tattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| |||||||||| ||  ||||||||| ||||||||||||| |||| || || |||||| ||| || | |||| |||||| ||| ||||||||||      
T  2582819 tattataagcaaaaatcaatattttagattgattcattaaatgatgtatgtagtctataataaaggtcataaacataatttaatgaatgaatctaaaata 2582918  T
Q  187 tttatttttgcttataatagt 207  Q
    || || ||| |||||||||||    
T  2582919 ttaatatttacttataatagt 2582939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 215
Target Start/End: Original strand, 4406240 - 4406380
Alignment:
Q  76 ccattcggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaac 174  Q
    |||| |||| ||||||| ||| |||||| ||| ||||||||| ||||||||||||| |||| |  || |||||| || ||| |||||||||| |  |||     
T  4406240 ccatccggtcactattataagtaaaaatcaacattttagatttattcattaaatgatgtatgtggtctataataaagaccacatacatcattaattgaat 4406339  T
Q  175 gaatctaaaaagtttatttttgcttataatagtaactgaag 215  Q
    ||||| ||||  |  |||||||||||||||| | |||||||    
T  4406340 gaatccaaaatataaatttttgcttataataatgactgaag 4406380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 21587026 - 21586966
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcattta 168  Q
    ||||||||||||||| ||||||| |||| || || |||||||||| || ||||||||||||    
T  21587026 ttttagattcattcaataaatgatgtatgtagtctataatataggacacatacatcattta 21586966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 50371145 - 50371185
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataata 148  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  50371145 ttttagattcatttattaaattacgtatttaatcaataata 50371185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 54931948 - 54931900
Alignment:
Q  88 tattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  54931948 tattacaagtaaaaattaacattttagattcattcattaaatgatgtat 54931900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 21224690 - 21224793
Alignment:
Q  81 cggtgactattacaagcaaaaattaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatct 180  Q
    |||| ||||||| ||||||||| |||  |||||||||||||||||||||| |||  | |||  || ||||  |||  |||||||||||| ||| ||||||    
T  21224690 cggtcactattataagcaaaaactaaaatttagattcattcattaaatgatgtaggtgatctttattataaaccacgtacatcatttaatgaatgaatct 21224789  T
Q  181 aaaa 184  Q
    ||||    
T  21224790 aaaa 21224793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 23568516 - 23568461
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    |||| ||||||| ||||||||| |||| ||||||||||||||||||||||| ||||    
T  23568516 cggtcactattataagcaaaaactaacattttagattcattcattaaatgatgtat 23568461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 53176317 - 53176444
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| ||| |||||||||| ||||| ||||||||||||||||| |||| | ||  |||| | ||  |||||||| |||| |  ||| ||||||||||    
T  53176317 actattataagtaaaaattaacattttatattcattcattaaatgatgtatgttatttataaaaaagatcaaatacaacattaactgaatgaatctaaaa 53176416  T
Q  185 agtttatttttgcttataatagtaactg 212  Q
      |  |||||||||||||||||| ||||    
T  53176417 tataaatttttgcttataatagtgactg 53176444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 14061554 - 14061488
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagtata 223  Q
    |||||||||| || ||| ||| |||||||||| | |||||||||||||||  |||||| ||||||||    
T  14061554 atacatcattcaatgaatgaacctaaaaagttaacttttgcttataatagcgactgaatggagtata 14061488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 14451080 - 14450966
Alignment:
Q  94 aagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatt 192  Q
    ||||||||||| || |||||| ||||||| || ||||| |||| | ||| |||||| || |||  | ||||||| || ||| |||||||||| ||  |||    
T  14451080 aagcaaaaatttacattttaggttcattcgtttaatgatgtatgtgatctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtagatt 14450981  T
Q  193 tttgcttataatagt 207  Q
    |||||||||||||||    
T  14450980 tttgcttataatagt 14450966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 23568461 - 23568511
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| ||| |||||||||| |||  |||||||||||||||||    
T  23568461 atacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagt 23568511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 2254061 - 2253965
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataata 205  Q
    ||||| ||||||||| |||||||  ||| || || ||| ||||| ||| ||||||||||||| |||  |||||||||| || ||||||| ||||||||    
T  2254061 ttttaaattcattcaataaatgatatatgtagtctata-tatagaccacatacatcatttaatgaataaatctaaaaaattaatttttgtttataata 2253965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 21142151 - 21142094
Alignment:
Q  155 aaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactg 212  Q
    ||||||||||||||| | | |||||||||| ||| ||||||| |||||||||| ||||    
T  21142151 aaatacatcatttaatgcatgaatctaaaatgttgatttttgtttataatagtgactg 21142094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 166
Target Start/End: Original strand, 21142099 - 21142180
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatt 166  Q
    ||||||| || ||||||| ||| |||||||||||| |||||||||| ||||||| |  |||||| || ||| ||||||||||    
T  21142099 actattataaacaaaaatcaacattttagattcatgcattaaatgatgtatttagtttataataaagaccatatacatcatt 21142180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 23004021 - 23003976
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttata 202  Q
    |||||| |||||| |||||||||||||| ||| |||||||||||||    
T  23004021 atacattatttaatgaacgaatctaaaatgttaatttttgcttata 23003976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 24941233 - 24941120
Alignment:
Q  95 agcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttattt 193  Q
    |||||||||| || |||||||| |||||| | ||||| |||||| ||  |||||| || ||| |||||||||| |  ||| | |||||||||||  ||||    
T  24941233 agcaaaaattcaccttttagatacattcaattaatgatgtatttgatatataataaagaccacatacatcattaattgaatgtatctaaaaagtgaattt 24941134  T
Q  194 ttgcttataatagt 207  Q
    ||||||||| ||||    
T  24941133 ttgcttatattagt 24941120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 32588156 - 32588107
Alignment:
Q  164 atttaacgaacgaatctaaaaagtttatttttgcttataatagtaactga 213  Q
    ||||||| || |||||||||| ||| ||||||| ||||||||||||||||    
T  32588156 atttaacaaatgaatctaaaatgttgatttttgattataatagtaactga 32588107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 36072678 - 36072561
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||| ||||||||||||||||| |||| || || |||||| || ||| |||||||||  |  ||| |||||||||| |   | ||||||||||||||||    
T  36072678 ttttaaattcattcattaaatgatgtatgtagtctataataaagaccatatacatcataaattgaatgaatctaaaatgcaaaattttgcttataatagt 36072579  T
Q  208 aactgaagggagtataaa 225  Q
     || | |||| |||||||    
T  36072578 gaccggagggtgtataaa 36072561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 36786160 - 36786281
Alignment:
Q  87 ctattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    |||||| || ||||||| ||| ||||||||||||||| | ||||| |||| || ||  || ||||  ||| ||||||||||| | ||| ||||| ||||     
T  36786160 ctattataaacaaaaatcaacattttagattcattcaattaatgatgtatatagtctttattataaaccacatacatcatttgatgaatgaatccaaaat 36786259  T
Q  186 gtttatttttgcttataatagt 207  Q
     || ||||||||||||||||||    
T  36786260 attgatttttgcttataatagt 36786281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 222
Target Start/End: Complemental strand, 37255812 - 37255676
Alignment:
Q  86 actattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||| || |||||| | ||||||||| ||||| | |||| || |  ||| ||||| ||| ||||||||||||  ||| ||||||||||    
T  37255812 actattataagcaaaagttcactttttaaattcattcaataaattatgtatgtagtttata-tatagaccacatacatcatttattgaatgaatctaaaa 37255714  T
Q  185 agtttatttttgcttataatagtaactgaagggagtat 222  Q
    |    | |||||||||||||||| || |||||||||||    
T  37255713 aaccaacttttgcttataatagtgacagaagggagtat 37255676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 4406310 - 4406250
Alignment:
Q  147 tataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||||||||||||| |||  ||||||||| ||| |||||| |||||||||||    
T  4406310 tatagaccacatacatcatttaatgaataaatctaaaatgttgatttttacttataatagt 4406250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 15641345 - 15641273
Alignment:
Q  94 aagcaaaaattaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatt 166  Q
    ||||||||||||  |||||| |||||||||| ||||| |||| || |  ||||||||| ||| ||||||||||    
T  15641345 aagcaaaaattactttttaggttcattcatttaatgatgtatgtagttcataatatagaccatatacatcatt 15641273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 19878355 - 19878295
Alignment:
Q  147 tataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||||||| ||||| ||| |||||||||| ||| ||||||||||||| ||||    
T  19878355 tatagtccacatacatcgtttaatgaatgaatctaaaatgttaatttttgcttatattagt 19878295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 40814807 - 40814755
Alignment:
Q  79 ttcggtgactattacaagcaaaaattaac-ttttagattcattcattaaatga 130  Q
    |||||| ||| ||| || ||||||||||| |||||||||||||||||||||||    
T  40814807 ttcggtcactgttataaacaaaaattaacattttagattcattcattaaatga 40814755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 40952417 - 40952357
Alignment:
Q  147 tataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||| ||| ||| ||||||||| ||| |||||||||| ||| ||| ||||||||||||||    
T  40952417 tatagaccacatatatcatttaatgaatgaatctaaaatgttgattattgcttataatagt 40952357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 43616224 - 43616276
Alignment:
Q  155 aaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||||||||||||  || |||| |||||| || ||||||||||||||||||    
T  43616224 aaatacatcatttaataaatgaatttaaaaaattgatttttgcttataatagt 43616276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 16121096 - 16120960
Alignment:
Q  86 actattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||||||| ||||||||| | ||||||| ||||||  |||||||||||| |||| |||||||||||  ||| |||| |||||    
T  16121096 actattataagcaaaaatcaactttttagattcattaaataaatgatgtatttggtcaataatatagaccaagtacatcatttattgaatgaatttaaaa 16120997  T
Q  185 agtttatttttgcttataatagtaactgaagggagta 221  Q
    || | | |||| ||||||||||| || |||| |||||    
T  16120996 agataacttttacttataatagtgaccgaagagagta 16120960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 32254825 - 32254952
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| ||| |||||||||| ||||||| |||||| |||||||| |||| || || |||||| || ||| ||||||||||||| ||| |||||    
T  32254825 cggtcactattataaggaaaaattaacattttagaatcattcgttaaatgatgtatgtagtctataataaagaccacatacatcatttaatgaatgaatc 32254924  T
Q  180 taaaaagtttatttttgcttataatagt 207  Q
    |||||  || | ||||||||||||||||    
T  32254925 taaaatattaacttttgcttataatagt 32254952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 34379740 - 34379866
Alignment:
Q  81 cggtgactattacaagcaaaaattaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatct 180  Q
    |||| ||||||| |||||||||   | ||||||||||||||||||||||| |||| |  ||  || ||| | ||| ||||||||||||| ||| ||||||    
T  34379740 cggtcactattataagcaaaaacataattttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatct 34379839  T
Q  181 aaaaagtttatttttgcttataatagt 207  Q
    |||| ||| ||||||||||||||||||    
T  34379840 aaaatgttgatttttgcttataatagt 34379866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 205
Target Start/End: Original strand, 15517095 - 15517219
Alignment:
Q  81 cggtgactattacaagcaaaaattaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatct 180  Q
    |||| ||||||| |||||||||   | ||||||||||||||||||||||| |||| |  ||  || ||||| ||| ||||||||||||| ||| ||||||    
T  15517095 cggtcactattataagcaaaaacataattttagattcattcattaaatgatgtatatcgtctttattatagaccacatacatcatttaatgaatgaatct 15517194  T
Q  181 aaaaagtttatttttgcttataata 205  Q
    ||||  || ||||||||||||||||    
T  15517195 aaaatattgatttttgcttataata 15517219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 207
Target Start/End: Complemental strand, 34379876 - 34379745
Alignment:
Q  76 ccattcggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaac 174  Q
    |||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||| |||| |  || |||||| || | | ||||||||||||| |||     
T  34379876 ccatacggtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaat 34379777  T
Q  175 gaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||| |||| | | |||||||||||||||||    
T  34379776 gaatct-aaaattatgtttttgcttataatagt 34379745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 26527199 - 26527321
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||| |||||||| ||||||| |||| | |||| || ||  || ||||  ||| ||||||||||||| ||| ||||||||||    
T  26527199 actattataagcaaaaatcaacattttagatacattcataaaataatgtatgtagtctttattataaaccacatacatcatttaatgaatgaatctaaaa 26527298  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||| ||||||||||||||||||    
T  26527299 tgttaatttttgcttataatagt 26527321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 26527321 - 26527199
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||| |||| |  |  |||||| || | | |||||| |||| | ||| | ||||||||    
T  26527321 actattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtttataataaagactacatacattattttatgaatgtatctaaaa 26527222  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||| ||||||||||||||||||    
T  26527221 tgttgatttttgcttataatagt 26527199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 32254952 - 32254830
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||| ||||  ||||||||||||||||||||||| |||| |  ||  || ||||| | | ||||||||||||||||| || |||||||    
T  32254952 actattataagcaaaagttaatattttagattcattcattaaatgatgtatgtggtctttattatagactacatacatcatttaacgaatgattctaaaa 32254853  T
Q  185 agtttatttttgcttataatagt 207  Q
     ||| |||||| |||||||||||    
T  32254852 tgttaatttttccttataatagt 32254830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 14173399 - 14173535
Alignment:
Q  86 actattacaagcaaaaat-taacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||| ||||||||||||||| ||||||| |||| || || ||||||| | ||| ||||||||||||  ||| |||||||| |    
T  14173399 actattataagcaaaaatctaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaatctaaga 14173498  T
Q  185 agtttatttttgcttataatagtaactgaagggagtat 222  Q
    |||  |||||| |||||||| || || |||||| ||||    
T  14173499 agtagattttt-cttataattgtgaccgaagggtgtat 14173535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 14177935 - 14178071
Alignment:
Q  86 actattacaagcaaaaat-taacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||| ||||||||||||||| ||||||| |||| || || ||||||| | ||| ||||||||||||  ||| |||||||| |    
T  14177935 actattataagcaaaaatctaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaatctaaga 14178034  T
Q  185 agtttatttttgcttataatagtaactgaagggagtat 222  Q
    |||  |||||| |||||||| || || |||||| ||||    
T  14178035 agtagattttt-cttataattgtgaccgaagggtgtat 14178071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 79 - 207
Target Start/End: Original strand, 16120967 - 16121096
Alignment:
Q  79 ttcggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaa 177  Q
    |||||| ||||||| ||| |||| ||| ||||| | ||||||||| ||||||| ||| ||  || ||| ||| | ||||||||||||||||   || |||    
T  16120967 ttcggtcactattataagtaaaagttatctttttaaattcattcaataaatgatgtacttggtctatattattgaccaaatacatcatttatttaatgaa 16121066  T
Q  178 tctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||| ||||||||||||||||||    
T  16121067 tctaaaaagttgatttttgcttataatagt 16121096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 13462965 - 13463063
Alignment:
Q  108 ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||||| |||||| ||||||| |||| ||||| ||| ||||  ||| ||||||||||||| ||| ||| |||||||||  ||||||||||||||||||    
T  13462965 ttttagatccattcaataaatgatgtatgtaatctata-tataaaccacatacatcatttaatgaatgaacctaaaaagtcaatttttgcttataatagt 13463063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 223
Target Start/End: Complemental strand, 3203802 - 3203664
Alignment:
Q  86 actattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaa 184  Q
    ||||||| |||||||||| ||||||| || |||||| | ||||||| ||||||  |||| ||||||| |   |||||||||| |  ||| ||| ||||||    
T  3203802 actattataagcaaaaatcaactttttaggttcatttaataaatgatgtatttggtcaagaatatagacttgatacatcattcattgaatgaacctaaaa 3203703  T
Q  185 agtttatttttgcttataatagtaactgaagggagtata 223  Q
    | || |||||||||||||||||| || | ||||||||||    
T  3203702 aattgatttttgcttataatagtgaccggagggagtata 3203664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 3203675 - 3203819
Alignment:
Q  81 cggtgactattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||| || |||| || |||||||| | ||||| ||||  | || ||| | | | ||||||||||||||||   || ||| |    
T  3203675 cggtcactattataagcaaaaatcaattttttaggttcattcaatgaatgatgtatcaagtctatattcttgaccaaatacatcatttattaaatgaacc 3203774  T
Q  180 taaaaagtttatttttgcttataatagtaactgaagggagtataa 224  Q
    ||||||||| |||||||||||||||||| |||| ||| |||||||    
T  3203775 taaaaagttgatttttgcttataatagtgactggaggaagtataa 3203819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 15517219 - 15517100
Alignment:
Q  88 tattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| |||||||||| ||  ||||||||||||||||||||||| |||| |  || |||||| || | | ||||||||||||| ||| |||||| ||||     
T  15517219 tattataagcaaaaatcaatattttagattcattcattaaatgatgtatgtggtctataataaagacgatatacatcatttaatgaatgaatct-aaaat 15517121  T
Q  187 tttatttttgcttataatagt 207  Q
    | | |||||||||||||||||    
T  15517120 tatgtttttgcttataatagt 15517100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 14173496 - 14173399
Alignment:
Q  110 ttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| ||||||| |||| |  |||||| ||||| | | |||| |||||||  ||| ||||||||||| |  ||||||||||||||||||    
T  14173496 ttagattcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaattagatttttgcttataatagt 14173399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 14178032 - 14177935
Alignment:
Q  110 ttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    ||||||||||||| ||||||| |||| |  |||||| ||||| | | |||| |||||||  ||| ||||||||||| |  ||||||||||||||||||    
T  14178032 ttagattcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaattagatttttgcttataatagt 14177935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 18886377 - 18886301
Alignment:
Q  147 tataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaactgaagggagtata 223  Q
    ||||| ||| ||| ||||||||| ||| ||||||||||  || |||||||||||||||||| |||| |||| |||||    
T  18886377 tatagaccacatatatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgactggagggtgtata 18886301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 204
Target Start/End: Complemental strand, 31996635 - 31996511
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||| ||| |||||| |||||| ||||||||| |||| || || |||||| |  ||| |||||| ||| |  ||| |||||    
T  31996635 cggtcactattataagcaaaaatcaacattttaggttcatttattaaatgatgtatgtagtctataataaataccatatacattattaattgaatgaatc 31996536  T
Q  180 taaaaagtttatttttgcttataat 204  Q
    | ||| ||| |||||||||||||||    
T  31996535 tgaaatgttgatttttgcttataat 31996511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 34170151 - 34170087
Alignment:
Q  143 ataatataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagt 207  Q
    |||||||||  || ||||||||||||| ||| |||||||||| ||| ||||||| ||||||||||    
T  34170151 ataatatagatcacatacatcatttaatgaatgaatctaaaatgttgatttttgtttataatagt 34170087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 4329745 - 4329683
Alignment:
Q  147 tataggccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaa 209  Q
    ||||| ||| |||||| |||||| ||| ||||||| || ||| ||||||||||||||||||||    
T  4329745 tatagaccacatacataatttaaggaatgaatctagaatgttgatttttgcttataatagtaa 4329683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 10258433 - 10258308
Alignment:
Q  88 tattacaagcaaaaattaactttt-agattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaag 186  Q
    ||||| ||| ||||| |||||||| ||||||||||| | ||||| |||| |  ||| || ||||| |||  ||||||||||||  || |||||||||| |    
T  10258433 tattataagtaaaaaataactttttagattcattcaattaatgatgtatatggtcattattatagaccatgtacatcatttaataaatgaatctaaaatg 10258334  T
Q  187 tttatttttgcttataatagtaactg 212  Q
    || ||||||| |||||| ||| ||||    
T  10258333 ttgatttttgtttataacagtgactg 10258308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 12480131 - 12480078
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaac 210  Q
    |||||||||||||||||  ||||||||| ||| |||||| ||||||||| ||||    
T  12480131 atacatcatttaacgaataaatctaaaatgttgatttttacttataataataac 12480078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 18886317 - 18886362
Alignment:
Q  86 actattacaagcaaaaattaac-ttttagattcattcattaaatga 130  Q
    ||||||| |||||||||||||  |||||||||||||||||||||||    
T  18886317 actattataagcaaaaattaatattttagattcattcattaaatga 18886362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 29419863 - 29419916
Alignment:
Q  152 gccaaatacatcatttaacgaacgaatctaaaaagtttatttttgcttataata 205  Q
    |||| ||||||||||||| ||| |||||||||| ||| |||||| |||||||||    
T  29419863 gccacatacatcatttaatgaatgaatctaaaatgttgatttttacttataata 29419916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 33689359 - 33689238
Alignment:
Q  86 actattacaagcaaaaattaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatctaaaaa 185  Q
    ||||||| |||||||||| ||| ||||| |||||| ||||||||| |||| || || |||||| |  | | |||||| ||| |  ||| |||| |||||     
T  33689359 actattaaaagcaaaaatcaacatttagtttcatttattaaatgatgtatgtagtctataataaatactatatacattattaattgaatgaatataaaat 33689260  T
Q  186 gtttatttttgcttataatagt 207  Q
     || ||||||||||||||||||    
T  33689259 attgatttttgcttataatagt 33689238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 12218500 - 12218452
Alignment:
Q  161 atcatttaacgaacgaatctaaaaagtttatttttgcttataatagtaa 209  Q
    ||||||||| ||| |||| ||||| ||| ||||||||||||||||||||    
T  12218500 atcatttaatgaatgaatataaaatgttgatttttgcttataatagtaa 12218452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 208
Target Start/End: Original strand, 13281538 - 13281666
Alignment:
Q  81 cggtgactattacaagcaaaaat-taacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatc 179  Q
    |||| ||||||| |||||||||| ||  ||||||||||||||| | ||||| |||| | |||  |  ||||| ||| |||||||||||||  || |||||    
T  13281538 cggtcactattataagcaaaaatctagattttagattcattcaattaatgatgtatatgatctttcttatagtccacatacatcatttaatcaatgaatc 13281637  T
Q  180 taaaaagtttatttttgcttataatagta 208  Q
    |||||  || | |||| ||||||||||||    
T  13281638 taaaatattgaattttacttataatagta 13281666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 24612 - 24737
Alignment:
Q  83 gtgactattacaagcaaaa-attaacttttagattcattcattaaatgacgtatttaatcaataatataggccaaatacatcatttaacgaacgaatcta 181  Q
    ||||||| || |||||||| ||||  ||||||||||||||| | ||| |||||| | |||  || ||||| ||| ||||||||||||| ||| |||||||    
T  24612 gtgactaatataagcaaaacattatattttagattcattcaattaataacgtatattatctttattatagaccacatacatcatttaatgaatgaatcta 24711  T
Q  182 aaaagtttatttttgcttataatagt 207  Q
    |||  || ||||||||||||||||||    
T  24712 aaatattaatttttgcttataatagt 24737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 24742 - 24687
Alignment:
Q  81 cggtgactattacaagcaaaaattaac-ttttagattcattcattaaatgacgtat 135  Q
    |||| ||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  24742 cggtcactattataagcaaaaattaatattttagattcattcattaaatgatgtat 24687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 89657 - 89609
Alignment:
Q  157 atacatcatttaacgaacgaatctaaaaagtttatttttgcttataata 205  Q
    ||||||||||||| ||| |||||||||| ||| ||||||||||||||||    
T  89657 atacatcatttaatgaaagaatctaaaatgttgatttttgcttataata 89609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University