View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0278_low_24 (Length: 231)
Name: NF0278_low_24
Description: NF0278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0278_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 37547346 - 37547205
Alignment:
| Q |
1 |
ctttagcttatgatgtttaattccacttgaggaattaacctttacaatatccattttatatacaataattgtcattcatacaaatttaagtaggattcaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37547346 |
ctttagcttatgatgtttaattccacttgaggaattaacctttacaatatccattttatatacaataattgtcattcatacaaatttaagtaggattcaa |
37547247 |
T |
|
| Q |
101 |
taattttttatacaggtataaatacgtatactctgcaaacct |
142 |
Q |
| |
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||||||||||||||||||||||||| |||||||||||||||| |
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| T |
37547246 |
taattttttatacaggtataaatacatatactctgcaaacct |
37547205 |
T |
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