View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0278_low_29 (Length: 204)
Name: NF0278_low_29
Description: NF0278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0278_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 16814817 - 16814648
Alignment:
| Q |
1 |
ttggtaatccactagggttatttgaagcacctaaccttcttagggttttgattgctacttgtgattgtgatttttcttcttcaatgcttgannnnnnngt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
16814817 |
ttggtaatccactagggttatttgaagcacctaaccttcttagggttttgattgctacttgtgattgtgatttttcttcttcaatgcttgatttttttgt |
16814718 |
T |
|
| Q |
101 |
accttttctaacaacagaaaatccacctctacctagaatttctgaaacttcatattcatctgagagtttt |
170 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16814717 |
accttttctaacaacagaaaatccacctctacctagaatttctgaaacttcatattcatctgagagtttt |
16814648 |
T |
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