View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0278_low_6 (Length: 390)
Name: NF0278_low_6
Description: NF0278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0278_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 5941976 - 5941682
Alignment:
| Q |
1 |
aaagctaatgttagttttaatatgtacaaaactacaagaaacgtaacctatcaatgttggtccactattattgtatggtcaatttaatattttggagaca |
100 |
Q |
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|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5941976 |
aaagctaatgttggttttaatatgtacaaaactacaagaaatgtaacctatcaatgttggtccactattattgtatggtcaatttaatattttggagaca |
5941877 |
T |
|
| Q |
101 |
gtgttataaacaatttttattgatgttataatgtattgtaccggacgaactatcttttcctttgtatattagggtaacataaataagaagttgttgtaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
5941876 |
gtgttataaacaatttttattgatgttataatgtattgtaccggacgaattatcttttcctttgtatattagggtaacataaataaggagttgttgtaat |
5941777 |
T |
|
| Q |
201 |
gagttaattttctcttatttctgttctcaattttctcttatttaatcctcacctgccttaatcattcaaattattttattaatcaatgttatggt |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5941776 |
gagttaattttctcttatttctgttctcaattttctcttatttaatcctcacctgccttaatcattcaaattattttattaatcaatgttatggt |
5941682 |
T |
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