View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0279_low_35 (Length: 216)
Name: NF0279_low_35
Description: NF0279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0279_low_35
[» ] scaffold0054 (2 HSPs)
[» ] scaffold0285 (2 HSPs)
Alignment Details
Target: scaffold0054 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 3323 - 3510
Alignment:
Q
13
agaacctgtgataatattttacataattttttataatgaacttgtgacaatagaacaatgaagctatagtacnnnnnnnctttgcataatttacataata
112
Q
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || || ||| |||||||||||||||||||||
T
3323
agaacctgtgataatattttacataattttttataatgaacttgtgacaataaaacaatgaaactgtattactttttttctttgcataatttacataata
3422
T
Q
113
tttgatgtaattagatgtgttaggatactttgacagtagaacctgtgataatatatattttattaatttcttttgttcatctcactcg
200
Q
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||
T
3423
tttgatgtaattagatgtgttaggatactgtgacagtagaacctgtgataatatatattttgttaatttcttttgttaatttcactcg
3510
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0054; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 166
Target Start/End: Original strand, 3298 - 3339
Alignment:
Q
125
agatgtgttaggatactttgacagtagaacctgtgataatat
166
Q
|||||||||||| |||| ||||||||||||||||||||||||
T
3298
agatgtgttaggctactgtgacagtagaacctgtgataatat
3339
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0285 (Bit Score: 134; Significance: 6e-70; HSPs: 2)
Name: scaffold0285
Description:
Target: scaffold0285; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 8032 - 7846
Alignment:
Q
13
agaacctgtgataatattttacataattttttataatgaacttgtgacaatagaacaatgaagctatagtacnnnnnnnctttgcataatttacataata
112
Q
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||| |||||||||||||||||||||
T
8032
agaacctgtgataatattttacataattttttataatgaacttgtgacaatagaacaatgaaactgtattacttttcttctttgcataatttacataata
7933
T
Q
113
tttgatgtaattagatgtgttaggatactttgacagtagaacctgtgataatatatattttattaatttcttttgttcatctcactc
199
Q
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||| || ||||||
T
7932
tttgatgtaattagatgtgttaggatactgtgacagtagaacctgtgataatgtatattttgttaatttcttttgttaatttcactc
7846
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: scaffold0285; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 8057 - 8016
Alignment:
Q
125
agatgtgttaggatactttgacagtagaacctgtgataatat
166
Q
|||||||||||| |||| ||||||||||||||||||||||||
T
8057
agatgtgttaggctactgtgacagtagaacctgtgataatat
8016
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1 (Bit Score: 134; Significance: 6e-70; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 16764186 - 16764000
Alignment:
Q
13
agaacctgtgataatattttacataattttttataatgaacttgtgacaatagaacaatgaagctatagtacnnnnnnnctttgcataatttacataata
112
Q
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || || ||| |||||||||||||||||||||
T
16764186
agaacctgtgataatattttacataattttttataatgaacttgtgacaataaaacaatgaaactgtattactttttttctttgcataatttacataata
16764087
T
Q
113
tttgatgtaattagatgtgttaggatactttgacagtagaacctgtgataatatatattttattaatttcttttgttcatctcactc
199
Q
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||
T
16764086
tttgatgtaattagatgtgttaggatactgtgacagtagaacctgtgataatatatattttgttaatttcttttgttaatttcactc
16764000
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 13 - 182
Target Start/End: Complemental strand, 10801276 - 10801107
Alignment:
Q
13
agaacctgtgataatattttacataattttttataatgaacttgtgacaatagaacaatgaagctatagtacnnnnnnnctttgcataatttacataata
112
Q
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||| |||||||||||||||||||||
T
10801276
agaacctgtgataatattttacataattttttataatgaacctgtgacaatagaacaatgaaactgtagtactttttttctttgcataatttacataata
10801177
T
Q
113
tttgatgtaattagatgtgttaggatactttgacagtagaacctgtgataatatatattttattaatttc
182
Q
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
T
10801176
tttgatgtaattagatgtgttaggatactctgacagtagaacctgtgataatatatattttgttaatttc
10801107
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 10801301 - 10801260
Alignment:
Q
125
agatgtgttaggatactttgacagtagaacctgtgataatat
166
Q
|||||||||||| |||| ||||||||||||||||||||||||
T
10801301
agatgtgttaggctactgtgacagtagaacctgtgataatat
10801260
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 16764211 - 16764170
Alignment:
Q
125
agatgtgttaggatactttgacagtagaacctgtgataatat
166
Q
|||||||||||| |||| ||||||||||||||||||||||||
T
16764211
agatgtgttaggctactgtgacagtagaacctgtgataatat
16764170
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 25223257 - 25223191
Alignment:
Q
102
tttacataatatttgatgtaattagatgtgttaggatactttgacagtagaacctgtgataatatat
168
Q
||||| |||| |||||||||||||||||||||||| || | | |||||| | |||||||||||||||
T
25223257
tttacctaatttttgatgtaattagatgtgttaggctattgtcacagtatatcctgtgataatatat
25223191
T
Back To:
[
HSP Overview ] [
Target Overview ] [
Alignment Overview ]
© Oklahoma State University
SLOT GACOR - FITUR MAXWIN GAMPANG SCATTER HITAM DI LINK SLOT MAXWIN HARI INI
SLOT GACOR - FITUR MAXWIN GAMPANG SCATTER HITAM DI LINK SLOT MAXWIN HARI INI
Main Slot gacor sambil tembak langit pasti di link slot maxwin hari ini , daftar yuk id mu sekarang !!
Auroratoto & Situs Gacor Terpercaya
Maxi188, Hanomantoto, Togeljackpot, Wukong778
Auroratoto2 kami jamin akan bayar kemenangan Anda! Bergabung sekarang di Auroratoto, Maxi188, Hanomantoto, Togeljackpot, dan Wukong778 untuk pengalaman slot dan togel gacor dengan jackpot besar!
>
Rp.10.000 100% Tanpa Potongan
Visitors: 8394
