View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0282_low_10 (Length: 251)

Name: NF0282_low_10
Description: NF0282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0282_low_10
NF0282_low_10
[»] chr1 (12 HSPs)
chr1 (1-241)||(34121515-34121754)
chr1 (130-174)||(41761498-41761542)
chr1 (53-171)||(29994390-29994511)
chr1 (130-171)||(20748-20789)
chr1 (130-174)||(48660019-48660063)
chr1 (133-171)||(26032798-26032836)
chr1 (130-172)||(46447464-46447506)
chr1 (130-171)||(28455874-28455915)
chr1 (130-171)||(32007074-32007115)
chr1 (130-171)||(41808202-41808243)
chr1 (130-175)||(45294654-45294699)
chr1 (130-166)||(29587257-29587293)
[»] chr6 (5 HSPs)
chr6 (130-175)||(14939144-14939189)
chr6 (130-173)||(33621492-33621535)
chr6 (130-172)||(2959148-2959190)
chr6 (130-171)||(21000692-21000733)
chr6 (130-171)||(33704216-33704257)
[»] chr4 (11 HSPs)
chr4 (130-174)||(28798475-28798519)
chr4 (130-173)||(53457822-53457865)
chr4 (130-172)||(1173950-1173992)
chr4 (130-172)||(11277981-11278023)
chr4 (130-172)||(18257328-18257370)
chr4 (130-171)||(2864835-2864876)
chr4 (200-241)||(4924975-4925016)
chr4 (130-171)||(19849590-19849631)
chr4 (130-171)||(26424944-26424985)
chr4 (130-171)||(34739280-34739321)
chr4 (130-171)||(54768519-54768560)
[»] chr8 (15 HSPs)
chr8 (130-172)||(41849318-41849360)
chr8 (131-172)||(45264727-45264768)
chr8 (130-173)||(28817254-28817297)
chr8 (130-172)||(32333113-32333155)
chr8 (130-172)||(42192726-42192768)
chr8 (128-174)||(42364786-42364832)
chr8 (130-171)||(70610-70651)
chr8 (130-171)||(6602605-6602646)
chr8 (130-171)||(6678058-6678099)
chr8 (130-171)||(7792661-7792702)
chr8 (130-171)||(12534805-12534846)
chr8 (51-87)||(5385425-5385461)
chr8 (133-165)||(5700739-5700771)
chr8 (130-174)||(6099569-6099613)
chr8 (130-166)||(39303314-39303350)
[»] chr2 (10 HSPs)
chr2 (130-172)||(19537306-19537348)
chr2 (130-172)||(10639693-10639735)
chr2 (130-172)||(11459714-11459756)
chr2 (130-171)||(23839859-23839900)
chr2 (130-171)||(26605624-26605665)
chr2 (130-171)||(33083641-33083682)
chr2 (130-171)||(34234530-34234571)
chr2 (130-171)||(42578180-42578221)
chr2 (130-166)||(11816638-11816674)
chr2 (130-174)||(34460366-34460410)
[»] chr7 (8 HSPs)
chr7 (130-166)||(43753841-43753877)
chr7 (130-173)||(31770619-31770662)
chr7 (130-175)||(2146632-2146677)
chr7 (130-171)||(40058238-40058279)
chr7 (130-166)||(8439083-8439119)
chr7 (130-174)||(23358182-23358226)
chr7 (130-174)||(25112334-25112378)
chr7 (130-166)||(47250338-47250374)
[»] chr5 (8 HSPs)
chr5 (130-165)||(3386987-3387022)
chr5 (133-171)||(2786271-2786309)
chr5 (126-172)||(27721430-27721476)
chr5 (130-172)||(35317784-35317826)
chr5 (130-171)||(13203957-13203998)
chr5 (129-174)||(35545930-35545975)
chr5 (130-174)||(1191627-1191671)
chr5 (130-166)||(4825026-4825062)
[»] chr3 (9 HSPs)
chr3 (130-173)||(7824541-7824584)
chr3 (130-173)||(29689569-29689612)
chr3 (130-171)||(4601425-4601466)
chr3 (130-171)||(29750621-29750662)
chr3 (128-173)||(33334606-33334651)
chr3 (130-171)||(42392892-42392933)
chr3 (130-171)||(51666012-51666053)
chr3 (130-171)||(54151768-54151809)
chr3 (130-171)||(54158266-54158307)
[»] scaffold1348 (1 HSPs)
scaffold1348 (130-171)||(949-990)
[»] scaffold0044 (1 HSPs)
scaffold0044 (130-171)||(10060-10101)
[»] scaffold0032 (1 HSPs)
scaffold0032 (130-171)||(56481-56522)
[»] scaffold0067 (1 HSPs)
scaffold0067 (130-166)||(34823-34859)


Alignment Details
Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 34121515 - 34121754
Alignment:
Q  1 gcatattagctggtgtgcatcgcataaatttagtataagnnnnnnnnnnnaaatgaagttgtaaatcattgaaattaaactcacacaattgtgatat-ct 99  Q
    |||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||| | |||  | ||    
T  34121515 gcatattagctggtgtgcatcgcataaatttagtataagttttttttt--aaatgaagttgtaaatcattgaaattaaactcacacaactctgaggttct 34121612  T
Q  100 gagttcgaatccaaatcatgatatttgactttgcaatttcggcatttgccagttgaattaggacttcaagacaaatctagtataagtttaattaatcaaa 199  Q
     ||||||||| |  || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  34121613 tagttcgaattcggattatgatatttgactttgcaatttcgacatttgccagttgaattaggacttcaagacaaatctaatataagtttaatttatcaaa 34121712  T
Q  200 ttatgtaaataatttgactaaaattatatgagcatagtataa 241  Q
    ||| |||||||||||||||||||||||| |||||||||||||    
T  34121713 ttacgtaaataatttgactaaaattatacgagcatagtataa 34121754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 41761498 - 41761542
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaaa 174  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||    
T  41761498 ttgcaatttcggcatttgccagttgaactaggacttctagacaaa 41761542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 171
Target Start/End: Original strand, 29994390 - 29994511
Alignment:
Q  53 atgaagttgtaaatcattgaaattaaactcacaca--attgtgatatct-gagttcgaatccaaatcatgatatttgactttgcaatttcggcatttgcc 149  Q
    ||||||| ||||| || ||||||||||||||||||  |||||||  ||| | ||||||| ||  |||||||  | || | ||||||||||||||||||||    
T  29994390 atgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtctcgggttcgaacccggatcatgacgtctggccttgcaatttcggcatttgcc 29994489  T
Q  150 agttgaattaggacttcaagac 171  Q
    ||||||  ||||||||| ||||    
T  29994490 agttgagctaggacttctagac 29994511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 20789 - 20748
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  20789 ttgcaatttcggcatttgccagttgagttaggacttctagac 20748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 48660063 - 48660019
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaaa 174  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||    
T  48660063 ttgcaatttcggcatttgccagttgagctaggacttctagacaaa 48660019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 26032836 - 26032798
Alignment:
Q  133 caatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  26032836 caatttcggcatttgtcagttgaattaggacttctagac 26032798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 46447464 - 46447506
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagaca 172  Q
    ||||||||||||||||||||||||||| ||| ||||| |||||    
T  46447464 ttgcaatttcggcatttgccagttgaactagaacttctagaca 46447506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 28455915 - 28455874
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  28455915 ttgcaatttcggcatttgccagttgagctaggacttctagac 28455874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 32007115 - 32007074
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  32007115 ttgcaatttcggcatttgccagttgagctaggacttctagac 32007074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 41808243 - 41808202
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  41808243 ttgcaatttcggcatttgccagttgagctaggacttctagac 41808202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 45294699 - 45294654
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaaat 175  Q
    ||||||||||||||||||| ||||||  ||||||||| ||||||||    
T  45294699 ttgcaatttcggcatttgctagttgagctaggacttctagacaaat 45294654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 29587293 - 29587257
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttc 166  Q
    ||||||||||||||||||||||||||  |||||||||    
T  29587293 ttgcaatttcggcatttgccagttgagctaggacttc 29587257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 14939189 - 14939144
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaaat 175  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  14939189 ttgcaatttcggcatttgccagttgagttaggacttctagacaaat 14939144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 33621535 - 33621492
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaa 173  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||    
T  33621535 ttgcaatttcggcatttgccagttgagctaggacttctagacaa 33621492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 2959190 - 2959148
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagaca 172  Q
    ||||||||||||||||||| |||||| |||||||||| |||||    
T  2959190 ttgcaatttcggcatttgctagttgagttaggacttctagaca 2959148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 21000733 - 21000692
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  21000733 ttgcaatttcggcatttgccagttgagctaggacttctagac 21000692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 33704257 - 33704216
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  33704257 ttgcaatttcggcatttgccagttgagctaggacttctagac 33704216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 28798475 - 28798519
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaaa 174  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||    
T  28798475 ttgcaatttcggcatttgccagttgaactaggacttctagacaaa 28798519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 53457865 - 53457822
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaa 173  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||    
T  53457865 ttgcaatttcggcatttgccagttgagctaggacttctagacaa 53457822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 1173992 - 1173950
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagaca 172  Q
    ||||||||||||||||||||||||||  ||||||||| |||||    
T  1173992 ttgcaatttcggcatttgccagttgagctaggacttctagaca 1173950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 11278023 - 11277981
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagaca 172  Q
    ||||||||||||||||||||||||||  ||||||||| |||||    
T  11278023 ttgcaatttcggcatttgccagttgagctaggacttctagaca 11277981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 18257370 - 18257328
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagaca 172  Q
    ||||||||||||||||||||||||||  ||||||||| |||||    
T  18257370 ttgcaatttcggcatttgccagttgagctaggacttctagaca 18257328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 2864835 - 2864876
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||| |||||||||||||||| |||||||||| ||||    
T  2864835 ttgcaatttaggcatttgccagttgagttaggacttctagac 2864876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 4924975 - 4925016
Alignment:
Q  200 ttatgtaaataatttgactaaaattatatgagcatagtataa 241  Q
    ||||||||||||||||||| |||| ||||||| |||||||||    
T  4924975 ttatgtaaataatttgacttaaatcatatgagaatagtataa 4925016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 19849590 - 19849631
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  19849590 ttgcaatttcggcatttgccagttgagctaggacttctagac 19849631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 26424944 - 26424985
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  26424944 ttgcaatttcggcatttgccagttgagctaggacttctagac 26424985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 34739321 - 34739280
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  34739321 ttgcaatttcggcatttgccagttgagctaggacttctagac 34739280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 54768519 - 54768560
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  54768519 ttgcaatttcggcatttgccagttgagctaggacttctagac 54768560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 41849318 - 41849360
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagaca 172  Q
    |||||||||||||||||||||||||||||| |||||| |||||    
T  41849318 ttgcaatttcggcatttgccagttgaattaagacttccagaca 41849360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 45264727 - 45264768
Alignment:
Q  131 tgcaatttcggcatttgccagttgaattaggacttcaagaca 172  Q
    ||||||||||||||||||||||||| |||||||||| |||||    
T  45264727 tgcaatttcggcatttgccagttgagttaggacttctagaca 45264768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 28817297 - 28817254
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaa 173  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||    
T  28817297 ttgcaatttcggcatttgccagttgagctaggacttctagacaa 28817254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 32333155 - 32333113
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagaca 172  Q
    ||||||||||||||||||||||||||  ||||||||| |||||    
T  32333155 ttgcaatttcggcatttgccagttgagctaggacttctagaca 32333113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 42192726 - 42192768
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagaca 172  Q
    ||||||||||||||||||||||||||  ||||||||| |||||    
T  42192726 ttgcaatttcggcatttgccagttgagctaggacttctagaca 42192768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 42364786 - 42364832
Alignment:
Q  128 ctttgcaatttcggcatttgccagttgaattaggacttcaagacaaa 174  Q
    |||||||||||||||||||| |||||||  ||||||||| |||||||    
T  42364786 ctttgcaatttcggcatttggcagttgagataggacttctagacaaa 42364832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 70610 - 70651
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  70610 ttgcaatttcggcatttgccagttgagctaggacttctagac 70651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 6602605 - 6602646
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  6602605 ttgcaatttcggcatttgccagttgagctaggacttctagac 6602646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 6678058 - 6678099
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  6678058 ttgcaatttcggcatttgccagttgagctaggacttctagac 6678099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 7792702 - 7792661
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  7792702 ttgcaatttcggcatttgccagttgagctaggacttctagac 7792661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 12534805 - 12534846
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  12534805 ttgcaatttcggcatttgccagttgagctaggacttctagac 12534846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 5385461 - 5385425
Alignment:
Q  51 aaatgaagttgtaaatcattgaaattaaactcacaca 87  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  5385461 aaatgaagtggtaaatcactgaaattaaactcacaca 5385425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 5700739 - 5700771
Alignment:
Q  133 caatttcggcatttgccagttgaattaggactt 165  Q
    ||||||||||||||||||||||| |||||||||    
T  5700739 caatttcggcatttgccagttgagttaggactt 5700771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 6099613 - 6099569
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaaa 174  Q
    ||||||||||| ||||||| ||||||| ||||||||| |||||||    
T  6099613 ttgcaatttcgacatttgcaagttgaactaggacttctagacaaa 6099569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 39303350 - 39303314
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttc 166  Q
    ||||||||||||||||||||||||||  |||||||||    
T  39303350 ttgcaatttcggcatttgccagttgagctaggacttc 39303314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 19537348 - 19537306
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagaca 172  Q
    ||||||||||||||||||||||||||| ||||||||| |||||    
T  19537348 ttgcaatttcggcatttgccagttgaactaggacttctagaca 19537306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 10639693 - 10639735
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagaca 172  Q
    ||||||||||||||||||||||||||  ||||||||| |||||    
T  10639693 ttgcaatttcggcatttgccagttgagctaggacttctagaca 10639735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 11459756 - 11459714
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagaca 172  Q
    ||||||||||||||||||||||||||  ||||||||| |||||    
T  11459756 ttgcaatttcggcatttgccagttgagctaggacttctagaca 11459714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 23839900 - 23839859
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||| |||||||||||||||| |||||||||| ||||    
T  23839900 ttgcaattttggcatttgccagttgagttaggacttctagac 23839859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 26605665 - 26605624
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  26605665 ttgcaatttcggcatttgccagttgagctaggacttctagac 26605624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 33083641 - 33083682
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  33083641 ttgcaatttcggcatttgccagttgagctaggacttctagac 33083682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 34234571 - 34234530
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  34234571 ttgcaatttcggcatttgccagttgagctaggacttctagac 34234530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 42578221 - 42578180
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  42578221 ttgcaatttcggcatttgccagttgagctaggacttctagac 42578180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 11816638 - 11816674
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttc 166  Q
    ||||||||||||||||||||||||||  |||||||||    
T  11816638 ttgcaatttcggcatttgccagttgagctaggacttc 11816674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 34460410 - 34460366
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaaa 174  Q
    |||||||||||||||||| |||||||  ||||||||| |||||||    
T  34460410 ttgcaatttcggcatttgtcagttgagctaggacttctagacaaa 34460366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 43753841 - 43753877
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttc 166  Q
    ||||||||||||||||||||||||||| |||||||||    
T  43753841 ttgcaatttcggcatttgccagttgaactaggacttc 43753877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 31770619 - 31770662
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaa 173  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||    
T  31770619 ttgcaatttcggcatttgccagttgagctaggacttctagacaa 31770662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 2146677 - 2146632
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaaat 175  Q
    ||||||||||||||||| ||||||||  ||||||||| ||||||||    
T  2146677 ttgcaatttcggcattttccagttgagctaggacttctagacaaat 2146632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 40058279 - 40058238
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||| |||||||||||||||| |||||||||| ||||    
T  40058279 ttgcaattttggcatttgccagttgagttaggacttctagac 40058238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 8439119 - 8439083
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttc 166  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  8439119 ttgcaattttggcatttgccagttgaactaggacttc 8439083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 23358226 - 23358182
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaaa 174  Q
    |||||||||||| |||||||||||||  ||||||||| |||||||    
T  23358226 ttgcaatttcggtatttgccagttgagctaggacttctagacaaa 23358182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 25112334 - 25112378
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaaa 174  Q
    |||||||||||| |||||||||||||  ||||||||| |||||||    
T  25112334 ttgcaatttcggtatttgccagttgagctaggacttctagacaaa 25112378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 47250338 - 47250374
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttc 166  Q
    ||||||||||||||||||||||||||  |||||||||    
T  47250338 ttgcaatttcggcatttgccagttgagctaggacttc 47250374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 165
Target Start/End: Original strand, 3386987 - 3387022
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggactt 165  Q
    ||||||||||||||||||||||||||| ||||||||    
T  3386987 ttgcaatttcggcatttgccagttgaactaggactt 3387022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 2786309 - 2786271
Alignment:
Q  133 caatttcggcatttgccagttgaattaggacttcaagac 171  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  2786309 caatttcggcatttgccaattgaattaggacttctagac 2786271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 27721476 - 27721430
Alignment:
Q  126 gactttgcaatttcggcatttgccagttgaattaggacttcaagaca 172  Q
    ||||||||||||||||||||| ||||||||  ||||||||| |||||    
T  27721476 gactttgcaatttcggcattttccagttgagctaggacttctagaca 27721430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 35317784 - 35317826
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagaca 172  Q
    ||||||||||||||||||||||||||  ||||||||| |||||    
T  35317784 ttgcaatttcggcatttgccagttgagctaggacttctagaca 35317826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 13203998 - 13203957
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  13203998 ttgcaatttcggcatttgccagttgagctaggacttctagac 13203957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 35545975 - 35545930
Alignment:
Q  129 tttgcaatttcggcatttgccagttgaattaggacttcaagacaaa 174  Q
    ||||||||||||||||||| ||||||| |||| ||||| |||||||    
T  35545975 tttgcaatttcggcatttgtcagttgagttagaacttctagacaaa 35545930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 1191627 - 1191671
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaaa 174  Q
    ||||||||||| ||||||||||||||  ||||||||| |||||||    
T  1191627 ttgcaatttcgtcatttgccagttgagctaggacttctagacaaa 1191671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 4825026 - 4825062
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttc 166  Q
    ||||||||||||||||||||||||||  |||||||||    
T  4825026 ttgcaatttcggcatttgccagttgagctaggacttc 4825062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000005; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 7824541 - 7824584
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaa 173  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||    
T  7824541 ttgcaatttcggcatttgccagttgagctaggacttctagacaa 7824584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 29689569 - 29689612
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagacaa 173  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||    
T  29689569 ttgcaatttcggcatttgccagttgagctaggacttctagacaa 29689612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 4601466 - 4601425
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  4601466 ttgcaatttcggcatttgccagttgagctaggacttctagac 4601425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 29750662 - 29750621
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  29750662 ttgcaatttcggcatttgccagttgagttagtacttctagac 29750621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 33334651 - 33334606
Alignment:
Q  128 ctttgcaatttcggcatttgccagttgaattaggacttcaagacaa 173  Q
    ||||||||||||||||||||| ||||||  ||||||||| ||||||    
T  33334651 ctttgcaatttcggcatttgcaagttgagctaggacttctagacaa 33334606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 42392892 - 42392933
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  42392892 ttgcaatttcggcatttgccagttgagctaggacttctagac 42392933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 51666012 - 51666053
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  51666012 ttgcaatttcggcatttgccagttgagctaggacttctagac 51666053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 54151768 - 54151809
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  54151768 ttgcaatttcggcatttgccagttgagctaggacttctagac 54151809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 54158307 - 54158266
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  54158307 ttgcaatttcggcatttgccagttgagctaggacttctagac 54158266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 949 - 990
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  949 ttgcaatttcggcatttgccagttgagctaggacttctagac 990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 10060 - 10101
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  10060 ttgcaatttcggcatttgccagttgagctaggacttctagac 10101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 56522 - 56481
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttcaagac 171  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  56522 ttgcaatttcggcatttgccagttgagctaggacttctagac 56481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 34859 - 34823
Alignment:
Q  130 ttgcaatttcggcatttgccagttgaattaggacttc 166  Q
    ||||||||||||||||||||||||||  |||||||||    
T  34859 ttgcaatttcggcatttgccagttgagctaggacttc 34823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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