View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0282_low_2 (Length: 515)
Name: NF0282_low_2
Description: NF0282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0282_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 384; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 29 - 504
Target Start/End: Original strand, 47126403 - 47126882
Alignment:
| Q |
29 |
aacaatgactataaagcgttaattgttctccatatgagttgatttatgttaagttattgaagnnnnnnnccctcatgaagttgggatgcttggcatatac |
128 |
Q |
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| T |
47126403 |
aacaatgactataaagcgttaattgttctgcatatgagttgatttatgttaagttattgaagaaaaaaaccctcataaagttgggatgcttggcatatac |
47126502 |
T |
|
| Q |
129 |
ctctataattctaacatgtatagtaatgtttgatccaaggtctttcgtttttatggagctatcattcttcagtaaattggtacacannnnnnn-atcctt |
227 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
47126503 |
ctctataattctaacatgtatagtaatgtttgatccaaggtctttcgtttttatggagctatcattcttcagtaaattggtacacattttttttatcctt |
47126602 |
T |
|
| Q |
228 |
tgttagatacatatcttgaagcgcgtcatgacatggttataaggatccagttaaactttaccttatattgtgttaaaacatatctctactataaagtaaa |
327 |
Q |
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||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47126603 |
tgttagatacatatcttgaagcgtgtcatgacatagttataaggatccagttaaactttaccttatattgtgttaaaacatatctctactataaagtaaa |
47126702 |
T |
|
| Q |
328 |
attcacgttactacaccaacgacattgaatgatttgagctcaaattctactaatatggtcgtataactttatcaaatgataagaaatattttagaaaaat |
427 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47126703 |
attcacgttactacaccaacgacattgaatgatttgagctcaaattctactaatatggtcgtataactttatcaaatgataagaaatattttagaaaaat |
47126802 |
T |
|
| Q |
428 |
ataatgacatt---tagtattctctaaaaatttctcgatgtgcatataaagaaaataaaatccttgtgtattgtgttcat |
504 |
Q |
| |
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|||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
47126803 |
ttaatgacatttagtagtattctcttaaaatttatcgatgtgcatataaagaaaataaaatcattgtgtattgtgttcat |
47126882 |
T |
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