View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0283_high_3 (Length: 445)

Name: NF0283_high_3
Description: NF0283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0283_high_3
NF0283_high_3
[»] chr8 (7 HSPs)
chr8 (161-445)||(41780404-41780687)
chr8 (56-129)||(30410148-30410222)
chr8 (56-135)||(30405634-30405713)
chr8 (97-165)||(38757331-38757400)
chr8 (81-129)||(30405628-30405677)
chr8 (103-143)||(28644850-28644890)
chr8 (56-104)||(38757253-38757301)
[»] chr3 (4 HSPs)
chr3 (65-160)||(21847385-21847483)
chr3 (65-160)||(21850475-21850573)
chr3 (68-129)||(54167161-54167223)
chr3 (68-129)||(54171741-54171803)
[»] chr4 (6 HSPs)
chr4 (65-160)||(44151829-44151925)
chr4 (86-160)||(44147339-44147414)
chr4 (65-129)||(3771116-3771181)
chr4 (65-129)||(44147294-44147359)
chr4 (103-161)||(31670379-31670435)
chr4 (96-160)||(53722313-53722378)
[»] chr2 (6 HSPs)
chr2 (65-160)||(8055666-8055762)
chr2 (56-160)||(6463228-6463332)
chr2 (65-129)||(8051113-8051178)
chr2 (56-123)||(12999297-12999366)
chr2 (81-160)||(8051164-8051247)
chr2 (92-143)||(12999289-12999341)
[»] chr5 (13 HSPs)
chr5 (103-160)||(30695594-30695651)
chr5 (65-131)||(12019007-12019074)
chr5 (65-129)||(7099192-7099257)
chr5 (65-129)||(7103761-7103826)
chr5 (65-129)||(16798944-16799009)
chr5 (65-131)||(12023576-12023643)
chr5 (118-163)||(40367383-40367427)
chr5 (65-160)||(37682298-37682400)
chr5 (118-160)||(40371549-40371590)
chr5 (86-160)||(16798989-16799067)
chr5 (65-103)||(16794383-16794421)
chr5 (92-162)||(7099105-7099179)
chr5 (56-129)||(40367429-40367504)
[»] chr7 (11 HSPs)
chr7 (81-160)||(27757172-27757252)
chr7 (65-160)||(27761672-27761767)
chr7 (86-165)||(22901499-22901578)
chr7 (65-129)||(7939901-7939966)
chr7 (65-129)||(7944454-7944519)
chr7 (65-128)||(27757121-27757185)
chr7 (65-129)||(22901430-22901495)
chr7 (81-160)||(7939808-7939891)
chr7 (81-160)||(7944385-7944468)
chr7 (118-160)||(47419376-47419417)
chr7 (95-135)||(22901497-22901537)
[»] scaffold0440 (3 HSPs)
scaffold0440 (65-116)||(7782-7833)
scaffold0440 (81-160)||(7820-7902)
scaffold0440 (92-129)||(7798-7834)
[»] chr6 (8 HSPs)
chr6 (56-127)||(8319862-8319935)
chr6 (56-127)||(8315323-8315396)
chr6 (67-160)||(27535334-27535429)
chr6 (106-160)||(8315267-8315319)
chr6 (106-160)||(8319806-8319858)
chr6 (56-143)||(27574541-27574630)
chr6 (119-160)||(27574507-27574547)
chr6 (56-104)||(17096120-17096167)
[»] chr1 (7 HSPs)
chr1 (94-160)||(26311800-26311868)
chr1 (56-127)||(39794097-39794169)
chr1 (92-160)||(26316278-26316348)
chr1 (106-160)||(39794198-39794250)
chr1 (106-160)||(39796802-39796854)
chr1 (107-148)||(16588288-16588329)
chr1 (86-127)||(39794151-39794194)
[»] scaffold0044 (2 HSPs)
scaffold0044 (65-129)||(44683-44748)
scaffold0044 (65-129)||(49263-49328)


Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 161 - 445
Target Start/End: Original strand, 41780404 - 41780687
Alignment:
Q  161 cttttgacagtaagagccattctgcaagttggaggattttcttatgccatgttacatctccacctcttctaaatctgattctaagcatttgatttcttct 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41780404 cttttgacagtaagagccattctgcaagttggaggattttcttatgccatgttacatctccacctcttctaaatctgattctaagcatttgatttcttct 41780503  T
Q  261 accagtctgtaggcattcccgtccttttgttctttctagtgagttgagaacatgcaataaaaattatgattcagcaccatcctgatttgaatataatttt 360  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41780504 accaatctgtaggcattctcgtccttttgttctt-ctagtgagttgagaacatgcaataaaaattatgattcagcatcatcctgatttgaatataatttt 41780602  T
Q  361 ggtccgcattcctccacaagcatcaccaccaacatcaatagttgtcaagtattcatagcattgttctaatcatcactgagtgaca 445  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41780603 ggtccgcattcctccacaagcatcaccaccaacatcaatagttgtcaagtattcatagcattgttctaatcatcactgagtgaca 41780687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 30410222 - 30410148
Alignment:
Q  56 aattcacacaaaccttaggatcagaaactacttctgaact-gcttctgaactgcttctgaactagcttctgaaca 129  Q
    |||||||| ||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  30410222 aattcacataaaccttagaatcagaaactgcttctgaactagcttctgaactgcttctgaactagcttctgaaca 30410148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 30405713 - 30405634
Alignment:
Q  56 aattcacacaaaccttaggatcagaaactacttctgaactgcttctgaact-gcttctgaactagcttctgaacaagcttc 135  Q
    |||||||| ||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  30405713 aattcacataaaccttagaatcagaaactgcttctgaactgcttctgaactagcttctgaact-gcttctgaactagcttc 30405634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 38757331 - 38757400
Alignment:
Q  97 cttctgaactgcttctgaacta-gcttctgaacaagcttccgcttctggtttttctgcgctatcactttt 165  Q
    |||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  38757331 cttctgaactgcttctgaagagtgcttctgaacaagcttccgcttctggtttttctgcgctatcaatttt 38757400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 30405677 - 30405628
Alignment:
Q  81 aactacttctgaact-gcttctgaactgcttctgaactagcttctgaaca 129  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  30405677 aactgcttctgaactagcttctgaactgcttctgaactagcttctgaaca 30405628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 28644850 - 28644890
Alignment:
Q  103 aactgcttctgaactagcttctgaacaagcttccgcttctg 143  Q
    ||||||||||||||| |||||||||| ||||||||||||||    
T  28644850 aactgcttctgaactcgcttctgaactagcttccgcttctg 28644890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 38757253 - 38757301
Alignment:
Q  56 aattcacacaaaccttaggatcagaaactacttctgaactgcttctgaa 104  Q
    |||||||| ||||||||| || ||||||| |||||||||||||||||||    
T  38757253 aattcacataaaccttagaataagaaactgcttctgaactgcttctgaa 38757301  T

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Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 21847385 - 21847483
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaact-agcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  21847385 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaacagagcttctgaacaagcttccgcttctggtttttctgcgctatca 21847483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 21850475 - 21850573
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaact-agcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  21850475 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaacagagcttctgaacaagcttccgcttctggtttttctgcgctatca 21850573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 54167223 - 54167161
Alignment:
Q  68 ccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaaca 129  Q
    |||||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||    
T  54167223 ccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaact-gcttctgaaca 54167161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 54171803 - 54171741
Alignment:
Q  68 ccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaaca 129  Q
    |||||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||    
T  54171803 ccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaact-gcttctgaaca 54171741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 44151829 - 44151925
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    ||||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  44151829 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaactagcttctgaacaagcttccgcttct-gattttctgcgctatca 44151925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 44147339 - 44147414
Alignment:
Q  86 cttctgaactgcttctgaac--tgcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  44147339 cttctgaactgcttctgaacagtgcttctgaactagcttctgaacaagcttccgcttct-gattttctgcgctatca 44147414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 3771116 - 3771181
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaaca 129  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||    
T  3771116 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaact-gcttctgaaca 3771181  T

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Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 44147294 - 44147359
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaaca 129  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||    
T  44147294 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaact-gcttctgaaca 44147359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 31670379 - 31670435
Alignment:
Q  103 aactgcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatcac 161  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||  |||||||||||    
T  31670379 aactgcttctgaactaacttctgaactagcttccgcttctgatttt--tgcgctatcac 31670435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 53722313 - 53722378
Alignment:
Q  96 gcttctgaac--tgcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    ||||||||||  |||||| ||||  |||||||||||||||||||||||||| |||||||||||||||    
T  53722313 gcttctgaacagtgcttcagaacctgcttctgaacaagcttccgcttctgg-ttttctgcgctatca 53722378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 8055666 - 8055762
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaac--tgcttctgaactgcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    ||||||||| |||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  8055666 aaaccttagaatcagaaactgcttctgaacagtgcttctgaactgcttctgaactagcttctgaacaagcttccgcttct-gattttctgcgctatca 8055762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 56 - 160
Target Start/End: Complemental strand, 6463332 - 6463228
Alignment:
Q  56 aattcacacaaaccttaggatcagaaactacttctgaactgcttctgaactgctt-ctgaactag--cttctgaacaagcttccgcttctggtttttctg 152  Q
    |||||||| ||||||||| || ||||||| |||||||||||||||||||||  || |||||| ||  ||||||||||||||||||||||||| |||||||    
T  6463332 aattcaca-aaaccttagaataagaaactgcttctgaactgcttctgaactaatttctgaac-agtacttctgaacaagcttccgcttctgg-ttttctg 6463236  T
Q  153 cgctatca 160  Q
    ||||||||    
T  6463235 cgctatca 6463228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 8051113 - 8051178
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaaca 129  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||    
T  8051113 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaact-gcttctgaaca 8051178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 12999366 - 12999297
Alignment:
Q  56 aattcacacaaaccttaggatcagaaactacttctgaact-gcttctgaact-gcttctgaactagcttc 123  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||| | ||||||| |||||||||    
T  12999366 aattcacataaaccttaggatcagaaactgcttctgaactagcttctgaattagcttctggactagcttc 12999297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 8051164 - 8051247
Alignment:
Q  81 aactacttctgaac--tgcttctgaactgcttctgaacta--gcttctgaac-aagcttccgcttctggtttttctgcgctatca 160  Q
    |||| |||||||||  |||||||||||||||||||||| |  |||||||||| |||||||||||||| | |||||||||||||||    
T  8051164 aactgcttctgaacagtgcttctgaactgcttctgaacaactgcttctgaacaaagcttccgcttct-gattttctgcgctatca 8051247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 12999341 - 12999289
Alignment:
Q  92 aactgcttctgaact-gcttctgaactagcttctgaacaagcttccgcttctg 143  Q
    ||||||||||||||| ||||||||| ||||||||| || ||||||||||||||    
T  12999341 aactgcttctgaactagcttctgaattagcttctggactagcttccgcttctg 12999289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 30695594 - 30695651
Alignment:
Q  103 aactgcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30695594 aactgcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatca 30695651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 12019007 - 12019074
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaacaag 131  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||||    
T  12019007 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaact-gcttctgaacaag 12019074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 7099257 - 7099192
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaaca 129  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||    
T  7099257 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaact-gcttctgaaca 7099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 7103826 - 7103761
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaaca 129  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||    
T  7103826 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaact-gcttctgaaca 7103761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 16798944 - 16799009
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaaca 129  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||    
T  16798944 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaact-gcttctgaaca 16799009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 12023576 - 12023643
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaacaag 131  Q
    ||||||||| |||||||||| |||||||||||||| |||||  |||||||||||| |||||||||||||    
T  12023576 aaaccttagaatcagaaactgcttctgaactgcttttgaacagtgcttctgaact-gcttctgaacaag 12023643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 40367427 - 40367383
Alignment:
Q  118 agcttctgaacaagcttccgcttctggtttttctgcgctatcactt 163  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  40367427 agcttctgaacaagcttccgcttctgg-ttttctgcgctatcactt 40367383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 37682298 - 37682400
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaac--tgcttctgaac---tgcttctgaacta--gcttctgaacaa-gcttccgcttctggtttttctgcgct 156  Q
    ||||||||| |||||||||| |||||||||  |||||||||||   ||||||||||| |  |||||||||||| |||||||||||| | |||||||||||    
T  37682298 aaaccttagaatcagaaactgcttctgaacagtgcttctgaacaagtgcttctgaacaactgcttctgaacaaagcttccgcttct-gattttctgcgct 37682396  T
Q  157 atca 160  Q
    ||||    
T  37682397 atca 37682400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 40371590 - 40371549
Alignment:
Q  118 agcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  40371590 agcttctgaacaagcttccgcttctgg-ttttctgcgctatca 40371549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 16798989 - 16799067
Alignment:
Q  86 cttctgaactgcttctgaac--tgcttctgaacta--gcttctgaacaa-gcttccgcttctggtttttctgcgctatca 160  Q
    ||||||||||||||||||||  ||||||||||| |  |||||||||||| |||||||||||| | |||||||||||||||    
T  16798989 cttctgaactgcttctgaacagtgcttctgaacaactgcttctgaacaaagcttccgcttct-gattttctgcgctatca 16799067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 16794383 - 16794421
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctga 103  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  16794383 aaaccttagaatcagaaactgcttctgaactgcttctga 16794421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 7099179 - 7099105
Alignment:
Q  92 aactgcttctgaac--tgcttctgaacta--gcttctgaacaa-gcttccgcttctggtttttctgcgctatcact 162  Q
    ||||||||||||||  ||||||||||| |  |||||||||||| ||||||||||||| |||| |||||||||||||    
T  7099179 aactgcttctgaacagtgcttctgaacaactgcttctgaacaaagcttccgcttctgatttt-ctgcgctatcact 7099105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 40367504 - 40367429
Alignment:
Q  56 aattcacacaaaccttaggatcagaaactacttct-gaactgcttctgaac--tgcttctgaactagcttctgaaca 129  Q
    |||||||| ||||||||| ||||||||||||||||  ||||| ||||||||   |||||||||| ||||||||||||    
T  40367504 aattcaca-aaaccttagaatcagaaactacttctaaaactgattctgaacagagcttctgaacaagcttctgaaca 40367429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 27757172 - 27757252
Alignment:
Q  81 aactacttctgaac--tgcttctgaactgcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    |||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  27757172 aactgcttctgaacggtgcttctgaactgcttctgaactagcttctgaacaagcttccgcttct-gattttctgcgctatca 27757252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 27761672 - 27761767
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    ||||||||| || ||||||| ||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  27761672 aaaccttagaattagaaactgcttctgaactgcttctgaacagtgcttctgaact-gcttctgaacaagcttccgcttct-gattttctgcgctatca 27761767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 22901499 - 22901578
Alignment:
Q  86 cttctgaactgcttctgaact-gcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatcactttt 165  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  22901499 cttctgaactgcttcttaactagcttctaaactagcttctgaacaagcttccgcttct-gattttctgcgctatcactttt 22901578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 7939966 - 7939901
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaaca 129  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||    
T  7939966 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaact-gcttctgaaca 7939901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 7944519 - 7944454
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaaca 129  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||    
T  7944519 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaact-gcttctgaaca 7944454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 27757121 - 27757185
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaac 128  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||||||| ||||||||||    
T  27757121 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaact-gcttctgaac 27757185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 22901430 - 22901495
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaaca 129  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||||| | |||||||||||    
T  22901430 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaa-ttgcttctgaaca 22901495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 7939891 - 7939808
Alignment:
Q  81 aactacttctgaac--tgcttctgaactgcttctgaacta--gcttctgaac-aagcttccgcttctggtttttctgcgctatca 160  Q
    |||| |||||||||  |||||||||||||||||||||| |  |||||||||| |||||||||||||| | |||||||||||||||    
T  7939891 aactgcttctgaacagtgcttctgaactgcttctgaacaactgcttctgaacaaagcttccgcttct-gattttctgcgctatca 7939808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 7944468 - 7944385
Alignment:
Q  81 aactacttctgaac--tgcttctgaactgcttctgaacta--gcttctgaac-aagcttccgcttctggtttttctgcgctatca 160  Q
    |||| |||||||||  |||||||||||||||||||||| |  |||||||||| |||||||||||||| | |||||||||||||||    
T  7944468 aactgcttctgaacagtgcttctgaactgcttctgaacaactgcttctgaacaaagcttccgcttct-gattttctgcgctatca 7944385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 47419417 - 47419376
Alignment:
Q  118 agcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    ||||||||||||||||||||||||| | |||||||||||||||    
T  47419417 agcttctgaacaagcttccgcttct-gattttctgcgctatca 47419376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 22901497 - 22901537
Alignment:
Q  95 tgcttctgaactgcttctgaactagcttctgaacaagcttc 135  Q
    |||||||||||||||||| ||||||||||| ||| ||||||    
T  22901497 tgcttctgaactgcttcttaactagcttctaaactagcttc 22901537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 44; Significance: 7e-16; HSPs: 3)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 7782 - 7833
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaactgcttctgaac 116  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  7782 aaaccttagaatcagaaactgcttctgaactgcttctgaactgcttctgaac 7833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 7820 - 7902
Alignment:
Q  81 aactacttctgaac--tgcttctgaac--tgcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    |||| |||||||||  |||||||||||  |||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  7820 aactgcttctgaacagtgcttctgaacagtgcttctgaacttgcttctgaacaagcttccgcttct-aattttctgcgctatca 7902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 7798 - 7834
Alignment:
Q  92 aactgcttctgaactgcttctgaactagcttctgaaca 129  Q
    |||||||||||||||||||||||||| |||||||||||    
T  7798 aactgcttctgaactgcttctgaact-gcttctgaaca 7834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 8319935 - 8319862
Alignment:
Q  56 aattcacacaaaccttaggatcagaaactacttctgaactgcttctga--actgcttctgaactagcttctgaa 127  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||||  | ||||||||||||||||||||||    
T  8319935 aattcacataaaccttagaataagaaactgcttctgaactgcttctgaagagtgcttctgaactagcttctgaa 8319862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 8315396 - 8315323
Alignment:
Q  56 aattcacacaaaccttaggatcagaaactacttctgaactgcttctga--actgcttctgaactagcttctgaa 127  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||||  | ||||| ||||||||||||||||    
T  8315396 aattcacataaaccttagaataagaaactgcttctgaactgcttctgaagagtgcttatgaactagcttctgaa 8315323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 27535429 - 27535334
Alignment:
Q  67 accttaggatcagaaactacttctgaa-ctgcttctgaact-gcttctgaact-agcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    ||||||| || ||||||| ||||| || || ||| |||||| ||||||||||  ||||||||||||||||||||||||||| |||||||||||||||    
T  27535429 accttagaattagaaactgcttctaaaactacttatgaactagcttctgaacagagcttctgaacaagcttccgcttctgg-ttttctgcgctatca 27535334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 8315319 - 8315267
Alignment:
Q  106 tgcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    |||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  8315319 tgcttctgaact-gcttctgaacaagcttccgcttct-gattttctgcgctatca 8315267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 8319858 - 8319806
Alignment:
Q  106 tgcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    |||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  8319858 tgcttctgaact-gcttctgaacaagcttccgcttct-gattttctgcgctatca 8319806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 143
Target Start/End: Complemental strand, 27574630 - 27574541
Alignment:
Q  56 aattcacacaaaccttaggatcagaaactacttctgaa-ctgcttctgaact-gcttctgaact-agcttctgaacaagcttccgcttctg 143  Q
    |||||||| ||||||||| |||||||||| ||||| || ||||||||||||| ||||||||||  |||||  |||||||||||||||||||    
T  27574630 aattcaca-aaaccttagaatcagaaactgcttctcaaactgcttctgaactagcttctgaacagagcttaggaacaagcttccgcttctg 27574541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 27574547 - 27574507
Alignment:
Q  119 gcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  27574547 gcttctgaacaagcttccgcttttgg-ttttctgcgctatca 27574507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 17096167 - 17096120
Alignment:
Q  56 aattcacacaaaccttaggatcagaaactacttctgaactgcttctgaa 104  Q
    |||||||| ||||||||| || ||||||| |||||||||||||||||||    
T  17096167 aattcaca-aaaccttagaataagaaactgcttctgaactgcttctgaa 17096120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 26311800 - 26311868
Alignment:
Q  94 ctgcttctgaact-gcttctgaacta-gcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    ||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||| ||||    
T  26311800 ctgcttctgaactagcttctgaacagtgcttctgaacaagcttccgcttctggtttttctgcgcaatca 26311868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 39794097 - 39794169
Alignment:
Q  56 aattcacacaaaccttaggatcagaaactacttctgaactgcttctga--actgcttctgaactagcttctgaa 127  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||||  | |||||||||||| |||||||||    
T  39794097 aattcacataaaccttagaataagaaactacttctgaactgcttctgaagagtgcttctgaact-gcttctgaa 39794169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 26316278 - 26316348
Alignment:
Q  92 aactgcttctgaactg-cttctgaacta-gcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    |||||||||||||||  |||||||||   |||||| |||||||||||| ||||||||||||||||||||||    
T  26316278 aactgcttctgaactaacttctgaacagtgcttctaaacaagcttccgtttctggtttttctgcgctatca 26316348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 39794198 - 39794250
Alignment:
Q  106 tgcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    |||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  39794198 tgcttctgaact-gcttctgaacaagcttccgcttct-gattttctgcgctatca 39794250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 39796802 - 39796854
Alignment:
Q  106 tgcttctgaactagcttctgaacaagcttccgcttctggtttttctgcgctatca 160  Q
    |||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  39796802 tgcttctgaact-gcttctgaacaagcttccgcttct-gattttctgcgctatca 39796854  T

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Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 16588329 - 16588288
Alignment:
Q  107 gcttctgaactagcttctgaacaagcttccgcttctggtttt 148  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  16588329 gcttctgaacaagcttatgaacaagcttccgcttctggtttt 16588288  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 39794151 - 39794194
Alignment:
Q  86 cttctgaactgcttctgaac--tgcttctgaactagcttctgaa 127  Q
    |||||||||||||||||||   ||||||||||||||||||||||    
T  39794151 cttctgaactgcttctgaagagtgcttctgaactagcttctgaa 39794194  T

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Target: scaffold0044 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 44748 - 44683
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaaca 129  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||    
T  44748 aaaccttagaatcagaaactgcttctgaactgcttctgaacagtgcttctgaact-gcttctgaaca 44683  T

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Target: scaffold0044; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 49328 - 49263
Alignment:
Q  65 aaaccttaggatcagaaactacttctgaactgcttctgaac--tgcttctgaactagcttctgaaca 129  Q
    ||||||||| |||||||||| ||| ||||||||||||||||  |||||||||||| |||||||||||    
T  49328 aaaccttagaatcagaaactgcttatgaactgcttctgaacagtgcttctgaact-gcttctgaaca 49263  T

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