View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0287_low_28 (Length: 208)
Name: NF0287_low_28
Description: NF0287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0287_low_28
Alignment Details
Target: chr2 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 9233996 - 9233873
Alignment:
Q
1
tattctcttccttggcttcttctgttaccacttccttggtctcaacttcaactggatcttgtgtttctacagcagctggagtttcttctgttgtttctgt
100
Q
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
T
9233996
tattctcttccttggcttcttctgttaccacttccttggtctcaacttcaactggatcttgtgtttctacggcagctggagtttcttctgttgtttctgt
9233897
T
Q
101
tggctgttcggttgtttcttctgt
124
Q
||||||||||||||||||||||||
T
9233896
tggctgttcggttgtttcttctgt
9233873
T
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