View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0288_high_15 (Length: 272)
Name: NF0288_high_15
Description: NF0288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0288_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 33 - 270
Target Start/End: Original strand, 2326981 - 2327218
Alignment:
| Q |
33 |
ctaaaagtgaaaccaaacatacactaaaaacgattgtttaaataacatctcatttaatttattgagcgaatcgattataccaaatgactcgaatcaataa |
132 |
Q |
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||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||| |
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| T |
2326981 |
ctaaaagtgaaaccaaacatacactaaaaacaatcgttcaaataacatctcatttaatctactgagcgaatcgattataccgaatgactcgaatcaataa |
2327080 |
T |
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| Q |
133 |
cagtaatgactggattaactaattgattataattcttctttaaaagaccctttttagactttattcattcacccaccttatgatccgtgatcttgtgttg |
232 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2327081 |
tagtaatgactggattaactaattgattataattcttctttaaaagaccctatttagactttattcattcacccaccttatgatccgtgatcttgtgttg |
2327180 |
T |
|
| Q |
233 |
tgtgggactgtggaatggatacacttcttgatgcagag |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
2327181 |
tgtgggactgtggaatggatacacttcttgatgcagag |
2327218 |
T |
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