View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0288_low_28 (Length: 202)
Name: NF0288_low_28
Description: NF0288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0288_low_28 |
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Alignment Details
Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 43183645 - 43183788
Alignment:
| Q |
15 |
gtgagatgaatcccggaataacagcgacggcgtcttccatctctctccgtcttccaatcaccgaagtatgtccccaactcactcccttgttattcattcc |
114 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43183645 |
gtgacatgaatcccggaataacagcgacggcgtcttccatctctctccgtcttccaatcaccgaagtatgtccccaactcactcccttgttattcattcc |
43183744 |
T |
|
| Q |
115 |
tacgcacttctcccttgtcacagccgtcaccaccacctcctccg |
158 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43183745 |
tacgcacttctcccttgtcacagccgtcaccaccacctcctccg |
43183788 |
T |
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