View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0290_high_8 (Length: 251)

Name: NF0290_high_8
Description: NF0290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0290_high_8
NF0290_high_8
[»] chr1 (38 HSPs)
chr1 (13-244)||(37726690-37726921)
chr1 (127-182)||(5806571-5806626)
chr1 (127-182)||(6911207-6911262)
chr1 (127-182)||(36361505-36361560)
chr1 (127-182)||(46666430-46666485)
chr1 (127-182)||(47031581-47031636)
chr1 (129-182)||(9115561-9115614)
chr1 (129-182)||(20260381-20260434)
chr1 (127-180)||(50191061-50191114)
chr1 (130-182)||(39329347-39329399)
chr1 (131-182)||(2430223-2430274)
chr1 (127-182)||(32824643-32824698)
chr1 (128-182)||(8331737-8331791)
chr1 (128-182)||(25473978-25474032)
chr1 (132-182)||(51445374-51445424)
chr1 (128-182)||(52630496-52630550)
chr1 (127-180)||(2632575-2632628)
chr1 (127-180)||(29091394-29091447)
chr1 (129-182)||(38964974-38965027)
chr1 (129-182)||(39930181-39930234)
chr1 (135-182)||(13653581-13653628)
chr1 (128-182)||(12190472-12190526)
chr1 (128-182)||(14788446-14788500)
chr1 (129-182)||(25789487-25789540)
chr1 (131-179)||(9832168-9832216)
chr1 (130-182)||(37436914-37436966)
chr1 (130-181)||(1597638-1597689)
chr1 (128-182)||(46960351-46960405)
chr1 (131-180)||(48916319-48916368)
chr1 (133-178)||(49824022-49824067)
chr1 (130-182)||(32202608-32202660)
chr1 (127-182)||(5518798-5518853)
chr1 (127-182)||(45771814-45771869)
chr1 (179-218)||(46960454-46960493)
chr1 (143-182)||(52699760-52699799)
chr1 (128-177)||(17475609-17475658)
chr1 (127-180)||(24116631-24116684)
chr1 (127-176)||(38519361-38519410)
[»] chr8 (27 HSPs)
chr8 (127-182)||(32661229-32661284)
chr8 (128-182)||(12710367-12710421)
chr8 (128-182)||(35818719-35818773)
chr8 (128-182)||(37392841-37392895)
chr8 (128-182)||(38133033-38133087)
chr8 (133-182)||(10896511-10896560)
chr8 (128-181)||(26061866-26061919)
chr8 (129-182)||(38363804-38363857)
chr8 (127-182)||(7930960-7931015)
chr8 (131-182)||(42755592-42755643)
chr8 (127-181)||(3049730-3049784)
chr8 (128-182)||(25837633-25837687)
chr8 (127-181)||(26602233-26602287)
chr8 (128-181)||(43872261-43872314)
chr8 (130-182)||(18297836-18297888)
chr8 (130-181)||(37982083-37982134)
chr8 (128-182)||(16313802-16313856)
chr8 (130-176)||(18726921-18726967)
chr8 (130-181)||(12649859-12649910)
chr8 (127-182)||(16219236-16219291)
chr8 (127-182)||(25899380-25899435)
chr8 (140-182)||(1554650-1554692)
chr8 (130-176)||(33444923-33444969)
chr8 (128-182)||(35394080-35394134)
chr8 (128-182)||(40197348-40197402)
chr8 (129-170)||(41228976-41229017)
chr8 (128-180)||(33533689-33533741)
[»] chr4 (37 HSPs)
chr4 (128-182)||(27555153-27555207)
chr4 (127-182)||(13230284-13230339)
chr4 (127-182)||(45748090-45748145)
chr4 (127-182)||(48873746-48873801)
chr4 (127-182)||(48879050-48879105)
chr4 (128-182)||(41859341-41859395)
chr4 (128-182)||(47670088-47670142)
chr4 (128-182)||(55968295-55968349)
chr4 (129-182)||(36860051-36860104)
chr4 (127-180)||(51968504-51968557)
chr4 (121-181)||(23686506-23686566)
chr4 (127-182)||(6280216-6280271)
chr4 (127-182)||(39730588-39730643)
chr4 (128-182)||(18405528-18405582)
chr4 (128-182)||(43722990-43723044)
chr4 (128-182)||(45595994-45596048)
chr4 (128-181)||(25932167-25932220)
chr4 (127-182)||(25916307-25916363)
chr4 (130-182)||(27763194-27763246)
chr4 (127-182)||(39835602-39835657)
chr4 (135-182)||(48519186-48519233)
chr4 (130-176)||(27942465-27942511)
chr4 (128-182)||(42773674-42773728)
chr4 (129-182)||(31938164-31938217)
chr4 (130-182)||(40435628-40435680)
chr4 (130-182)||(41744516-41744568)
chr4 (127-182)||(8321970-8322025)
chr4 (127-182)||(35999411-35999466)
chr4 (128-182)||(935852-935906)
chr4 (129-182)||(7258691-7258744)
chr4 (128-181)||(18405129-18405182)
chr4 (136-181)||(50673200-50673245)
chr4 (131-182)||(18931482-18931533)
chr4 (136-182)||(34238249-34238295)
chr4 (128-176)||(12276210-12276259)
chr4 (127-180)||(52469422-52469475)
chr4 (129-177)||(30790275-30790323)
[»] chr7 (30 HSPs)
chr7 (129-182)||(48160868-48160921)
chr7 (125-182)||(48341083-48341140)
chr7 (128-182)||(11329715-11329769)
chr7 (128-182)||(28904481-28904535)
chr7 (128-182)||(33378556-33378610)
chr7 (129-182)||(27214150-27214203)
chr7 (129-182)||(35488484-35488537)
chr7 (128-180)||(16916182-16916234)
chr7 (130-182)||(34930762-34930814)
chr7 (127-182)||(44565766-44565821)
chr7 (128-182)||(43948967-43949021)
chr7 (128-182)||(45265343-45265397)
chr7 (128-181)||(9947287-9947340)
chr7 (129-182)||(45448665-45448718)
chr7 (132-180)||(27248019-27248067)
chr7 (128-182)||(17276454-17276508)
chr7 (128-182)||(25924932-25924986)
chr7 (126-171)||(40212624-40212669)
chr7 (134-182)||(18823890-18823938)
chr7 (127-182)||(38396660-38396715)
chr7 (129-182)||(6656765-6656819)
chr7 (133-182)||(38543920-38543970)
chr7 (132-182)||(45045352-45045402)
chr7 (128-182)||(48313844-48313898)
chr7 (130-182)||(27419519-27419571)
chr7 (133-180)||(44819981-44820028)
chr7 (132-182)||(30686286-30686336)
chr7 (132-182)||(37534397-37534447)
chr7 (128-181)||(45722881-45722934)
chr7 (179-243)||(43446065-43446129)
[»] chr6 (12 HSPs)
chr6 (127-182)||(8029024-8029079)
chr6 (127-182)||(10246411-10246466)
chr6 (124-182)||(1316737-1316795)
chr6 (127-182)||(2657421-2657476)
chr6 (127-182)||(7053873-7053928)
chr6 (128-182)||(18897643-18897697)
chr6 (130-182)||(11570079-11570131)
chr6 (131-182)||(14170740-14170791)
chr6 (128-181)||(6706048-6706101)
chr6 (130-182)||(9762335-9762387)
chr6 (130-182)||(16968649-16968701)
chr6 (153-182)||(7344789-7344818)
[»] chr5 (26 HSPs)
chr5 (127-182)||(4765855-4765910)
chr5 (127-182)||(18411930-18411985)
chr5 (127-182)||(29543310-29543365)
chr5 (128-182)||(6091437-6091491)
chr5 (132-182)||(8646685-8646735)
chr5 (128-182)||(22936207-22936261)
chr5 (130-182)||(556001-556053)
chr5 (131-182)||(11855950-11856001)
chr5 (127-182)||(14207116-14207171)
chr5 (131-182)||(27481082-27481133)
chr5 (132-182)||(19065800-19065850)
chr5 (128-182)||(32535659-32535713)
chr5 (134-182)||(16720981-16721029)
chr5 (127-182)||(8406615-8406670)
chr5 (127-182)||(12970825-12970880)
chr5 (127-181)||(28429449-28429503)
chr5 (128-182)||(28602278-28602332)
chr5 (130-182)||(36703506-36703558)
chr5 (130-181)||(40276536-40276587)
chr5 (131-176)||(42012485-42012530)
chr5 (127-176)||(43347195-43347244)
chr5 (126-182)||(20962280-20962336)
chr5 (127-182)||(26637316-26637371)
chr5 (128-181)||(6930364-6930417)
chr5 (132-177)||(31583359-31583404)
chr5 (132-177)||(36978433-36978478)
[»] chr3 (32 HSPs)
chr3 (127-182)||(26848743-26848798)
chr3 (127-182)||(33218208-33218263)
chr3 (128-182)||(11239415-11239469)
chr3 (128-181)||(40907988-40908041)
chr3 (130-182)||(20414760-20414812)
chr3 (128-180)||(48340054-48340106)
chr3 (127-182)||(8476603-8476658)
chr3 (131-182)||(43132451-43132502)
chr3 (127-182)||(44952029-44952084)
chr3 (127-181)||(6231797-6231851)
chr3 (127-181)||(24574288-24574342)
chr3 (128-182)||(46359674-46359728)
chr3 (132-182)||(47115152-47115202)
chr3 (129-182)||(28770504-28770557)
chr3 (130-182)||(1098923-1098975)
chr3 (131-182)||(43719220-43719271)
chr3 (130-180)||(29512324-29512374)
chr3 (129-182)||(9320744-9320797)
chr3 (128-180)||(10823014-10823066)
chr3 (179-243)||(40584435-40584499)
chr3 (131-182)||(24783934-24783985)
chr3 (128-182)||(6832217-6832271)
chr3 (128-182)||(20297515-20297569)
chr3 (132-182)||(31611280-31611330)
chr3 (128-181)||(28693727-28693780)
chr3 (129-177)||(27822994-27823042)
chr3 (130-177)||(31436222-31436269)
chr3 (132-182)||(6927817-6927867)
chr3 (133-179)||(45826064-45826110)
chr3 (127-181)||(53166020-53166074)
chr3 (131-180)||(40584336-40584385)
chr3 (134-182)||(28124731-28124779)
[»] chr2 (38 HSPs)
chr2 (127-182)||(346640-346695)
chr2 (127-182)||(6171512-6171567)
chr2 (127-182)||(23943884-23943939)
chr2 (127-182)||(37533674-37533729)
chr2 (123-182)||(41729425-41729484)
chr2 (127-182)||(14777793-14777848)
chr2 (131-182)||(37233155-37233206)
chr2 (127-182)||(40569739-40569794)
chr2 (127-181)||(11071326-11071380)
chr2 (128-182)||(37192244-37192298)
chr2 (128-182)||(42674956-42675010)
chr2 (129-182)||(20426777-20426830)
chr2 (130-182)||(17965707-17965759)
chr2 (131-182)||(28311991-28312042)
chr2 (127-182)||(40951154-40951209)
chr2 (136-182)||(2521381-2521427)
chr2 (128-182)||(4559281-4559335)
chr2 (132-182)||(21737703-21737753)
chr2 (132-182)||(26309993-26310043)
chr2 (132-182)||(45693915-45693965)
chr2 (129-182)||(5770405-5770458)
chr2 (130-182)||(638318-638370)
chr2 (131-182)||(13760692-13760743)
chr2 (132-182)||(1623078-1623128)
chr2 (128-182)||(2050588-2050642)
chr2 (133-182)||(9734141-9734190)
chr2 (130-182)||(39819414-39819466)
chr2 (127-182)||(18713951-18714006)
chr2 (131-181)||(3902182-3902232)
chr2 (127-181)||(7007306-7007360)
chr2 (136-178)||(8868938-8868980)
chr2 (140-182)||(11763695-11763737)
chr2 (131-180)||(14832536-14832585)
chr2 (130-182)||(5003130-5003182)
chr2 (134-182)||(25724753-25724801)
chr2 (136-176)||(27358263-27358303)
chr2 (153-181)||(41750276-41750304)
chr2 (136-176)||(45408981-45409021)
[»] scaffold0006 (2 HSPs)
scaffold0006 (128-182)||(201648-201702)
scaffold0006 (135-182)||(143342-143389)
[»] scaffold0702 (2 HSPs)
scaffold0702 (128-182)||(3860-3914)
scaffold0702 (182-243)||(3747-3808)
[»] scaffold0662 (2 HSPs)
scaffold0662 (128-182)||(4188-4242)
scaffold0662 (182-240)||(4294-4352)


Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 13 - 244
Target Start/End: Original strand, 37726690 - 37726921
Alignment:
Q  13 attctcaactttactaaaggaaacaaagcagcctcgatgagcaaaaaagtgtttgaactttgaagcatcaaactctacaacaacgaaaagtcacatcgtg 112  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37726690 attctcaactttactaaagtaaacaaagcagcctcgatgagcaaaaaagtgtttgaactttgaagcatcaaactctacaacaatgaaaagtcacatcgtg 37726789  T
Q  113 tagcacaaataacatagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttggttaacattataatcttcccatgaaccttaa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37726790 tagcacaaataacatagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttggttaacattataatcttcccatgaaccttaa 37726889  T
Q  213 aaataggaagattaataggtaattacacatat 244  Q
    ||||||||||||||||||||||||||||||||    
T  37726890 aaataggaagattaataggtaattacacatat 37726921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 5806626 - 5806571
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  5806626 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 5806571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 6911207 - 6911262
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  6911207 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 6911262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 36361505 - 36361560
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  36361505 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 36361560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 46666430 - 46666485
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  46666430 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 46666485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 47031581 - 47031636
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  47031581 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 47031636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 9115561 - 9115614
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  9115561 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 9115614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 20260434 - 20260381
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  20260434 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 20260381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 50191114 - 50191061
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  50191114 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattcctt 50191061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 39329347 - 39329399
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  39329347 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 39329399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 2430223 - 2430274
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  2430223 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttgg 2430274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 32824643 - 32824698
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| || || ||||||||||||||||||||||||||||||    
T  32824643 tagggtgtgtttgtttcaaatttacgaaatttattcctaggaataacattccttgg 32824698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 8331737 - 8331791
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  8331737 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgg 8331791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 25473978 - 25474032
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  25473978 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgg 25474032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 51445424 - 51445374
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  51445424 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 51445374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 52630496 - 52630550
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  52630496 agggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgg 52630550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 2632575 - 2632628
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  2632575 tagggtgtatttgtttcaagtttactaaatttatttctaggaataacattcctt 2632628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 29091394 - 29091447
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    |||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  29091394 tagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattcctt 29091447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 38965027 - 38964974
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||| ||||| || ||||||||||||||||||||||||||||||    
T  38965027 gggtgtgtttgttttaagtttaccaaatttattcctaggaataacattccttgg 38964974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 39930181 - 39930234
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| ||||    
T  39930181 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattctttgg 39930234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 13653581 - 13653628
Alignment:
Q  135 gtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||    
T  13653581 gtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 13653628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 12190526 - 12190472
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| |  ||||||||||||| ||||||||||||||||    
T  12190526 agggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttgg 12190472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 14788446 - 14788500
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||| ||||| || |||||||||| |||||||||||||||||||    
T  14788446 agggtgtgtttgttttaagtttaccaaatttattcttaggaataacattccttgg 14788500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 25789487 - 25789540
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| |  ||||||||| ||||||||||||||||||||    
T  25789487 gggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttgg 25789540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 9832216 - 9832168
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattcct 179  Q
    |||||||||||||||||| |  |||||||||||||||||||||||||||    
T  9832216 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattcct 9832168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 37436966 - 37436914
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| || |||||||||| || ||||||||||||||||    
T  37436966 ggtgtgtttgtttcaagtttaccaaatttattcttaagaataacattccttgg 37436914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 1597689 - 1597638
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    ||||||||||||||||||| || |||||||||  ||||||||||||||||||    
T  1597689 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttg 1597638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 46960351 - 46960405
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||| || |  ||||||||||||||||||||||||| ||||    
T  46960351 agggtgtgtttgtttcaaatttatcaaatttattcctaggaataacattctttgg 46960405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 48916368 - 48916319
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    |||||||||||||||||| |  |||||||||| |||||||||||||||||    
T  48916368 gtgtgtttgtttcaagtttatcaaatttattcttaggaataacattcctt 48916319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 49824067 - 49824022
Alignment:
Q  133 gtgtttgtttcaagttcactaaatttattcctaggaataacattcc 178  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||    
T  49824067 gtgtttgtttcaagtttatcaaatttattcctaggaataacattcc 49824022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 32202660 - 32202608
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| |  |||||||||  |||||||||||||||||||    
T  32202660 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttgg 32202608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 5518853 - 5518798
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||| ||||||||| ||||| || |||||||||| | |||||||||||||||||    
T  5518853 tagggtctgtttgtttgaagtttaccaaatttattcattggaataacattccttgg 5518798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 45771814 - 45771869
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||| | ||||||| || |||||    
T  45771814 tagggtgtgtttgtttcaagtttaccaaatttattcccatgaataacctttcttgg 45771869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 46960454 - 46960493
Alignment:
Q  179 ttggttaacattataatcttcccatgaaccttaaaaatag 218  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  46960454 ttggttaacattataatattccaatgaaccttaaaaatag 46960493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 182
Target Start/End: Complemental strand, 52699799 - 52699760
Alignment:
Q  143 caagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  52699799 caagtttaccaaatttattcctaggaataacattccttgg 52699760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 17475658 - 17475609
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattc 177  Q
    |||||||||| |||||||||| |  ||||||||||||| |||||||||||    
T  17475658 agggtgtgttcgtttcaagtttatcaaatttattcctaagaataacattc 17475609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 24116684 - 24116631
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    |||||||||||||||| ||||| |  |||||||||| || ||||||||||||||    
T  24116684 tagggtgtgtttgttttaagtttaacaaatttattcttaagaataacattcctt 24116631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 38519410 - 38519361
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacatt 176  Q
    |||| |||||||||||||| || || |||||||||| |||||||||||||    
T  38519410 taggttgtgtttgtttcaaatttaccaaatttattcgtaggaataacatt 38519361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 32661284 - 32661229
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32661284 tagggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttgg 32661229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 12710367 - 12710421
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  12710367 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 12710421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 35818773 - 35818719
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  35818773 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 35818719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 37392895 - 37392841
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  37392895 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 37392841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 38133087 - 38133033
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  38133087 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgg 38133033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 10896560 - 10896511
Alignment:
Q  133 gtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||    
T  10896560 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 10896511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 26061866 - 26061919
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    ||||||||||||||| ||||| || |||||||||||||||||||||||||||||    
T  26061866 agggtgtgtttgttttaagtttaccaaatttattcctaggaataacattccttg 26061919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 38363804 - 38363857
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  38363804 gggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgg 38363857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 7930960 - 7931015
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||||||| ||||    
T  7930960 tagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattctttgg 7931015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 42755592 - 42755643
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  42755592 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgg 42755643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 3049730 - 3049784
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    |||||||||||||||||||||| |  |||||||||| ||||||||||||||||||    
T  3049730 tagggtgtgtttgtttcaagtttatcaaatttattcataggaataacattccttg 3049784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 25837633 - 25837687
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || |||||||||  |||||||||||||||||||    
T  25837633 agggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttgg 25837687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 26602287 - 26602233
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    |||||||||||||||||||||| || ||||||||| |||| ||||||||||||||    
T  26602287 tagggtgtgtttgtttcaagtttaccaaatttattgctagaaataacattccttg 26602233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 43872314 - 43872261
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    |||||||||||||||||||||  | ||||||||| |||||||||||||||||||    
T  43872314 agggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttg 43872261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 18297836 - 18297888
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| |  ||||||||| ||||||||||||||||||||    
T  18297836 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttgg 18297888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 37982134 - 37982083
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    ||||||||||||||||||| || |||||||||  ||||||||||||||||||    
T  37982134 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttg 37982083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 16313856 - 16313802
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| |  |||||||||  |||||||||||||||||||    
T  16313856 agggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttgg 16313802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 18726967 - 18726921
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacatt 176  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||    
T  18726967 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacatt 18726921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 12649859 - 12649910
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    ||||||||||||||||||| || ||||||||| ||| |||||||| ||||||    
T  12649859 ggtgtgtttgtttcaagtttaccaaatttatttctacgaataacaatccttg 12649910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 16219291 - 16219236
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||| ||||| |   |||||||||||||||||||| ||||||||    
T  16219291 tagggtgtgtttgttttaagtttatccaatttattcctaggaataacgttccttgg 16219236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 25899380 - 25899435
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||  |  |||||||||  |||||||||||||||||||    
T  25899380 tagggtgtgtttgtttcaagtgtaacaaatttatttttaggaataacattccttgg 25899435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 1554692 - 1554650
Alignment:
Q  140 tttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||| || |||||||||| |||||||||||||||||||    
T  1554692 tttcaagtttaccaaatttattcttaggaataacattccttgg 1554650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 33444969 - 33444923
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacatt 176  Q
    ||||||||||||||||||| ||| ||||||||| || ||||||||||    
T  33444969 ggtgtgtttgtttcaagtttactgaatttattcataagaataacatt 33444923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 35394080 - 35394134
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| |  |||||||||| ||| |||||||||| ||||    
T  35394080 agggtgtgtttgtttcaagtttatcaaatttattcttagtaataacattctttgg 35394134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 40197402 - 40197348
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||| |||||| |||||||| || |||||||||||||||||||| |||| ||||    
T  40197402 agggtttgtttgcttcaagtttaccaaatttattcctaggaataatattctttgg 40197348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 41229017 - 41228976
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaat 170  Q
    |||||||||||||||||||| || ||||||||||| ||||||    
T  41229017 gggtgtgtttgtttcaagtttaccaaatttattccaaggaat 41228976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 33533741 - 33533689
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    |||||||||||||||||||||    |||||||||||||||||||  |||||||    
T  33533741 agggtgtgtttgtttcaagtttgtcaaatttattcctaggaatattattcctt 33533689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 27555153 - 27555207
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27555153 agggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttgg 27555207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 13230339 - 13230284
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  13230339 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 13230284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 45748145 - 45748090
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  45748145 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 45748090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 48873746 - 48873801
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  48873746 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 48873801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 48879050 - 48879105
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  48879050 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 48879105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 41859395 - 41859341
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  41859395 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 41859341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 47670088 - 47670142
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  47670088 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 47670142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 55968349 - 55968295
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  55968349 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 55968295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 36860104 - 36860051
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  36860104 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 36860051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 51968504 - 51968557
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  51968504 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattcctt 51968557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 23686506 - 23686566
Alignment:
Q  121 ataacatagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    ||||| |||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  23686506 ataacttagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttg 23686566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 6280271 - 6280216
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  6280271 tagggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttgg 6280216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 39730643 - 39730588
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  39730643 tagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgg 39730588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 18405582 - 18405528
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  18405582 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgg 18405528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 43722990 - 43723044
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  43722990 agggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgg 43723044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 45595994 - 45596048
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  45595994 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgg 45596048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 25932167 - 25932220
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    |||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  25932167 agggtgtgtttgtttcaagtttcccaaatttattcctaggaataacattccttg 25932220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 25916363 - 25916307
Alignment:
Q  127 tagggtgtgtttgtttc-aagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||    
T  25916363 tagggtgtgtttgtttctaagtttaccaaatttattcctaggaataacattccttgg 25916307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 27763246 - 27763194
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  27763246 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgg 27763194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 39835657 - 39835602
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||    
T  39835657 tagggtgtgtttgtttcaagtttaccaaatttatttctatgaataacattccttgg 39835602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 48519233 - 48519186
Alignment:
Q  135 gtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||    
T  48519233 gtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 48519186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 27942465 - 27942511
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacatt 176  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||    
T  27942465 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacatt 27942511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 42773674 - 42773728
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||| |||||||||||||||| || |||||||||||||| |||||||||||||||    
T  42773674 agggcgtgtttgtttcaagtttaccaaatttattcctagaaataacattccttgg 42773728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 31938217 - 31938164
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| |  |||||||||| |||||||||||||||||||    
T  31938217 gggtgtgtttgtttcaagtttatcaaatttattcataggaataacattccttgg 31938164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 40435628 - 40435680
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| || |||||||||  |||||||||||||||||||    
T  40435628 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttgg 40435680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 41744568 - 41744516
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||| ||||    
T  41744568 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattcattgg 41744516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 8321970 - 8322025
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || |||||||||  |||||||||||||| ||||    
T  8321970 tagggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattctttgg 8322025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 35999411 - 35999466
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||| ||||||||||||||| || |||||||||| || ||||||||||||||||    
T  35999411 tagggtttgtttgtttcaagtttaccaaatttattcttaagaataacattccttgg 35999466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 935852 - 935906
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || |||||||||| || |||||||||| |||||    
T  935852 agggtgtgtttgtttcaagtttaccaaatttattcttaagaataacatttcttgg 935906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 7258691 - 7258744
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| |  ||||||||||  ||||||||||||||||||    
T  7258691 gggtgtgtttgtttcaagtttatcaaatttattctcaggaataacattccttgg 7258744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 18405129 - 18405182
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    ||||||||||||||| |||||  | |||||||||| ||||||||||||||||||    
T  18405129 agggtgtgtttgttttaagtttgccaaatttattcttaggaataacattccttg 18405182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 50673245 - 50673200
Alignment:
Q  136 tttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    ||||||||||||| |  |||||||||||||||||||||||||||||    
T  50673245 tttgtttcaagtttatcaaatttattcctaggaataacattccttg 50673200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 18931482 - 18931533
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||| ||||| |  |||||||||| |||||||||||||||||||    
T  18931482 gtgtgtttgttttaagtttatcaaatttattcttaggaataacattccttgg 18931533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 34238295 - 34238249
Alignment:
Q  136 tttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||| |  |||||||||| |||||||||||||||||||    
T  34238295 tttgtttcaagtttatcaaatttattcataggaataacattccttgg 34238249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 12276259 - 12276210
Alignment:
Q  128 agggtgtg-tttgtttcaagttcactaaatttattcctaggaataacatt 176  Q
    |||||||| ||||||||||||| ||||||||||||  |||||||||||||    
T  12276259 agggtgtgatttgtttcaagtttactaaatttatttataggaataacatt 12276210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 52469422 - 52469475
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    |||| ||||||||||| ||||| |  |||||||||| |||||||||||||||||    
T  52469422 taggatgtgtttgttttaagttaatcaaatttattcttaggaataacattcctt 52469475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 30790275 - 30790323
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattc 177  Q
    |||||||||||||||||||| |  ||||||||| |||||| ||||||||    
T  30790275 gggtgtgtttgtttcaagtttagcaaatttatttctaggagtaacattc 30790323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 48160921 - 48160868
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  48160921 gggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttgg 48160868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 48341083 - 48341140
Alignment:
Q  125 catagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  48341083 catagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 48341140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 11329715 - 11329769
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  11329715 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 11329769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 28904535 - 28904481
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  28904535 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 28904481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 33378556 - 33378610
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  33378556 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 33378610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 27214203 - 27214150
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  27214203 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 27214150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 35488537 - 35488484
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  35488537 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 35488484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 16916234 - 16916182
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  16916234 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattcctt 16916182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 34930814 - 34930762
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  34930814 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 34930762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 44565766 - 44565821
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  44565766 tagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgg 44565821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 43948967 - 43949021
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  43948967 agggtgtatttgtttcaagtttaccaaatttattcctaggaataacattccttgg 43949021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 45265397 - 45265343
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  45265397 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgg 45265343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 9947340 - 9947287
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||||||||||    
T  9947340 agggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttg 9947287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 45448665 - 45448718
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||||||||    
T  45448665 gggtgtgtttgtttcaagtttaccaaatttattcctatgaataacattccttgg 45448718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 27248019 - 27248067
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  27248019 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattcctt 27248067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 17276508 - 17276454
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||| || || ||||||||| ||||||||||||||||||||    
T  17276508 agggtgtgtttgtttcaattttacaaaatttatttctaggaataacattccttgg 17276454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 25924986 - 25924932
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||| ||| || ||||||||||||| ||||||||||||||||    
T  25924986 agggtgtgtttgtttcatgtttaccaaatttattcctaagaataacattccttgg 25924932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 40212624 - 40212669
Alignment:
Q  126 atagggtgtgtttgtttcaagttcactaaatttattcctaggaata 171  Q
    ||||||||||||||||||||||| || |||||||||||||||||||    
T  40212624 atagggtgtgtttgtttcaagtttaccaaatttattcctaggaata 40212669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 18823890 - 18823938
Alignment:
Q  134 tgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||| || ||||||||||||||||||||||||| ||||    
T  18823890 tgtttgtttcaagtttaccaaatttattcctaggaataacattctttgg 18823938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 38396715 - 38396660
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| |  ||||||||||||||||||| ||||| ||||    
T  38396715 tagggtgtgtttgtttcaagtttatcaaatttattcctaggaatagcattcattgg 38396660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 6656819 - 6656765
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaat-aacattccttgg 182  Q
    |||||||||| ||||||||| ||||||||||||| ||||||| ||||||||||||    
T  6656819 gggtgtgtttctttcaagtttactaaatttattcttaggaataaacattccttgg 6656765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 38543920 - 38543970
Alignment:
Q  133 gtgtttgtttcaa-gttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||    
T  38543920 gtgtttgtttcaaagtttactaaatttattcttaggaataacattccttgg 38543970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 45045352 - 45045402
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||| || |||||||||| ||||||||| |||||||||    
T  45045352 tgtgtttgtttcaagtttaccaaatttattcttaggaataatattccttgg 45045402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 48313844 - 48313898
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| |  ||||||||| |||||||||||||| |||||    
T  48313844 agggtgtgtttgtttcaagtttatcaaatttatttctaggaataacatttcttgg 48313898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 27419571 - 27419519
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| || |||||||||  ||||||||||||| |||||    
T  27419571 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacatttcttgg 27419519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 44819981 - 44820028
Alignment:
Q  133 gtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    |||||||||||||||| || |||||||||  |||||||||||||||||    
T  44819981 gtgtttgtttcaagtttaccaaatttatttttaggaataacattcctt 44820028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 30686336 - 30686286
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||| ||||| |  ||||||||| ||||||||||||||||||||    
T  30686336 tgtgtttgttttaagtttatcaaatttatttctaggaataacattccttgg 30686286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 37534447 - 37534397
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||| |  ||||||||| |||| |||||||||||||||    
T  37534447 tgtgtttgtttcaagtttatcaaatttatttctagaaataacattccttgg 37534397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 45722881 - 45722934
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    ||||||| ||| ||||||||| || |||||||||  ||||||||||||||||||    
T  45722881 agggtgtctttatttcaagtttaccaaatttatttttaggaataacattccttg 45722934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 43446129 - 43446065
Alignment:
Q  179 ttggttaacattataatcttcccatgaaccttaaaaataggaagattaataggtaattacacata 243  Q
    ||||||||||||||||| |||  | |||| ||||| |||||||   |||||||||||||||||||    
T  43446129 ttggttaacattataatattctaaagaacattaaagataggaaatataataggtaattacacata 43446065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 8029024 - 8029079
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  8029024 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 8029079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 10246466 - 10246411
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  10246466 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 10246411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 1316737 - 1316795
Alignment:
Q  124 acatagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||    
T  1316737 acatagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattctttgg 1316795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 2657421 - 2657476
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  2657421 tagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgg 2657476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 7053928 - 7053873
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  7053928 tagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgg 7053873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 18897643 - 18897697
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  18897643 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgg 18897697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 11570131 - 11570079
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  11570131 ggtgtctttgtttcaagtttaccaaatttattcctaggaataacattccttgg 11570079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 14170740 - 14170791
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  14170740 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgg 14170791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 6706101 - 6706048
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    ||||| ||||||||||||||| || || |||||| |||||||||||||||||||    
T  6706101 agggtatgtttgtttcaagtttaccaattttatttctaggaataacattccttg 6706048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 9762387 - 9762335
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| || || ||||||  |||||||||||||||||||    
T  9762387 ggtgtgtttgtttcaagtttaccaagtttattattaggaataacattccttgg 9762335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 16968649 - 16968701
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| |  ||||||||| ||||||||||||||| ||||    
T  16968649 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattctttgg 16968701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 182
Target Start/End: Complemental strand, 7344818 - 7344789
Alignment:
Q  153 aaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||||||||||||    
T  7344818 aaatttattcctaggaataacattccttgg 7344789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 4765910 - 4765855
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  4765910 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 4765855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 18411930 - 18411985
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  18411930 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 18411985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 29543365 - 29543310
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  29543365 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 29543310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 6091437 - 6091491
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  6091437 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 6091491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 8646735 - 8646685
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8646735 tgtgtttgtttcaagtttactaaatttattcctaggaataacattccttgg 8646685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 22936261 - 22936207
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  22936261 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 22936207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 556053 - 556001
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  556053 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 556001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 11856001 - 11855950
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  11856001 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 11855950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 14207171 - 14207116
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||| ||||    
T  14207171 tagggtgtgtttgtttcaagtttacaaaatttattcctaggaataacattcattgg 14207116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 27481082 - 27481133
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  27481082 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 27481133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 19065850 - 19065800
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  19065850 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 19065800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 32535659 - 32535713
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  32535659 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgg 32535713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 16721029 - 16720981
Alignment:
Q  134 tgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  16721029 tgtttgtttcaagtttactaaatttattcctaggaataacattcattgg 16720981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 8406615 - 8406670
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| |  ||||||||| ||||||||||||||||||||    
T  8406615 tagggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttgg 8406670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 12970880 - 12970825
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| |  ||||||||| ||||||||||||||||||||    
T  12970880 tagggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttgg 12970825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 28429449 - 28429503
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    |||||||||||||||||||||| || ||||||||| |||| ||||||||||||||    
T  28429449 tagggtgtgtttgtttcaagtttaccaaatttatttctagaaataacattccttg 28429503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 28602278 - 28602332
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || |||||||||  |||||||||||||||||||    
T  28602278 agggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttgg 28602332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 36703506 - 36703558
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||| || || |||||||||| |||||||||||||||||||    
T  36703506 ggtgtgtttgtttcaaatttaccaaatttattcataggaataacattccttgg 36703558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 40276587 - 40276536
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    ||||||||||||||||||| ||||||||||||| | | ||||||||||||||    
T  40276587 ggtgtgtttgtttcaagtttactaaatttattcttggtaataacattccttg 40276536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 42012530 - 42012485
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacatt 176  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||    
T  42012530 gtgtgtttgtttcaagtttactaaatttatttttaggaataacatt 42012485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 43347244 - 43347195
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacatt 176  Q
    ||||||||||||||||||||||  | |||||||||| |||||||||||||    
T  43347244 tagggtgtgtttgtttcaagttttcgaaatttattcttaggaataacatt 43347195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 20962280 - 20962336
Alignment:
Q  126 atagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||| ||||||||||| ||||| |  |||||||||| |||||||||||||||||||    
T  20962280 ataggatgtgtttgttttaagtttatcaaatttattcataggaataacattccttgg 20962336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 26637371 - 26637316
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||| ||||||||| |  |||||||||  |||||||||||||||||||    
T  26637371 tagggtgtgtttatttcaagtttatcaaatttatttttaggaataacattccttgg 26637316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 6930364 - 6930417
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    ||||||||||||||| ||||| |  |||||||||| || |||||||||||||||    
T  6930364 agggtgtgtttgttttaagtttatcaaatttattcatatgaataacattccttg 6930417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 31583404 - 31583359
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattc 177  Q
    ||||||||||| ||||| |||||||||||| ||| |||||||||||    
T  31583404 tgtgtttgttttaagtttactaaatttatttctacgaataacattc 31583359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 36978478 - 36978433
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattc 177  Q
    ||||||||||||||||| | ||||||||||  ||||||||||||||    
T  36978478 tgtgtttgtttcaagtttattaaatttatttataggaataacattc 36978433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 26848743 - 26848798
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  26848743 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 26848798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 33218263 - 33218208
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  33218263 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 33218208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 11239469 - 11239415
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  11239469 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 11239415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 40907988 - 40908041
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  40907988 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttg 40908041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 20414812 - 20414760
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  20414812 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 20414760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 48340106 - 48340054
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  48340106 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattcctt 48340054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 8476658 - 8476603
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  8476658 tagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgg 8476603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 43132502 - 43132451
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  43132502 gtgtgtttgtttcaagtttactaaatttattcttaggaataacattccttgg 43132451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 44952029 - 44952084
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  44952029 tagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgg 44952084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 6231851 - 6231797
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||||||||||    
T  6231851 tagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttg 6231797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 24574288 - 24574342
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    |||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  24574288 tagggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttg 24574342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 46359674 - 46359728
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  46359674 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgg 46359728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 47115202 - 47115152
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  47115202 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 47115152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 28770557 - 28770504
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||||||    
T  28770557 gggtgtgtttgtttcaaatttaccaaatttattcctaggaataacattccttgg 28770504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 1098923 - 1098975
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  1098923 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgg 1098975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 43719271 - 43719220
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  43719271 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgg 43719220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 29512324 - 29512374
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    |||||||||||||||| || || ||||||||||||||||||||||||||||    
T  29512324 ggtgtgtttgtttcaaatttaccaaatttattcctaggaataacattcctt 29512374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 9320797 - 9320744
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| |  |||||||||| |||||||||||||||||||    
T  9320797 gggtgtgtttgtttcaagtttatgaaatttattcataggaataacattccttgg 9320744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 10823066 - 10823014
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    ||||||||||||||||||||| |  ||||||||| ||||||||||||||||||    
T  10823066 agggtgtgtttgtttcaagtttagcaaatttatttctaggaataacattcctt 10823014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 40584435 - 40584499
Alignment:
Q  179 ttggttaacattataatcttcccatgaaccttaaaaataggaagattaataggtaattacacata 243  Q
    ||||||||||||||||| |||| | ||||||||||||||||||   |||||||| ||||||||||    
T  40584435 ttggttaacattataatattccaaggaaccttaaaaataggaaatataataggtgattacacata 40584499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 24783934 - 24783985
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||| || |||||||||| || ||||||||||||||||    
T  24783934 gtgtgtttgtttcaagtttaccaaatttattcataagaataacattccttgg 24783985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 6832271 - 6832217
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||| || || ||||||||||||| |||||||||| |||||    
T  6832271 agggtgtgtttgtttcaaatttaccaaatttattcctaagaataacattacttgg 6832217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 20297515 - 20297569
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||| ||||| || |||||||||| |||||||||||||| ||||    
T  20297515 agggtgtgtttgttttaagtttaccaaatttattcttaggaataacattctttgg 20297569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 31611330 - 31611280
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||| || |||||||||| || ||||||||||||||||    
T  31611330 tgtgtttgtttcaagtttaccaaatttattcttatgaataacattccttgg 31611280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 28693780 - 28693727
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    |||||||||||||||||| || ||||||||||||||||| |||||  |||||||    
T  28693780 agggtgtgtttgtttcaaatttactaaatttattcctagaaataattttccttg 28693727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 27822994 - 27823042
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattc 177  Q
    |||||||||||||||||||| || |||||||||  ||||||||||||||    
T  27822994 gggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattc 27823042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 31436269 - 31436222
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattc 177  Q
    ||||||||||||||||||| || |||||||||||| | ||||||||||    
T  31436269 ggtgtgtttgtttcaagtttaccaaatttattcctggaaataacattc 31436222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 6927817 - 6927867
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||| ||||| |  ||||||||| ||||||||||||||||||||    
T  6927817 tgtgtttgttttaagtttatcaaatttattactaggaataacattccttgg 6927867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 45826064 - 45826110
Alignment:
Q  133 gtgtttgtttcaagttcactaaatttattcctaggaataacattcct 179  Q
    ||||||||||| |||| |||| ||||||||||||||||||| |||||    
T  45826064 gtgtttgtttccagtttactagatttattcctaggaataactttcct 45826110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 53166074 - 53166020
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    |||||||||||||||||||||| |   |||||||| ||| |||||||||||||||    
T  53166074 tagggtgtgtttgtttcaagtttatccaatttatttctaagaataacattccttg 53166020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 40584336 - 40584385
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    |||||||||||||||||  |  ||||||||||||| ||||||||||||||    
T  40584336 gtgtgtttgtttcaagtgtaacaaatttattcctaagaataacattcctt 40584385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 28124779 - 28124731
Alignment:
Q  134 tgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||| || |||||||||  ||||| |||||||||||||    
T  28124779 tgtttgtttcaagtttaccaaatttatttttaggattaacattccttgg 28124731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 346695 - 346640
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  346695 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 346640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 6171512 - 6171567
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  6171512 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 6171567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 23943884 - 23943939
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  23943884 tagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 23943939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 37533674 - 37533729
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  37533674 tagggtgtgtttgtttcaagtttactaaatttatttctaggaataacattccttgg 37533729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 41729484 - 41729425
Alignment:
Q  123 aacatagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  41729484 aacatagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgg 41729425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 14777848 - 14777793
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  14777848 tagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgg 14777793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 37233155 - 37233206
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  37233155 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 37233206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 40569739 - 40569794
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  40569739 tagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgg 40569794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 11071326 - 11071380
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    |||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  11071326 tagggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttg 11071380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 37192244 - 37192298
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  37192244 agggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgg 37192298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 42675010 - 42674956
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| |||||    
T  42675010 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacatttcttgg 42674956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 20426830 - 20426777
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||| ||||| || ||||||||||||||||||||||||||||||    
T  20426830 gggtgtgtttgtttaaagtttaccaaatttattcctaggaataacattccttgg 20426777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 17965707 - 17965759
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  17965707 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgg 17965759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 28312042 - 28311991
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  28312042 gtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttgg 28311991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 40951209 - 40951154
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||| |||||||||||| || || ||||||||||||||||||||||||||||||    
T  40951209 tagggtatgtttgtttcaaatttaccaaatttattcctaggaataacattccttgg 40951154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 2521381 - 2521427
Alignment:
Q  136 tttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||    
T  2521381 tttgtttcaagtttaccaaatttattcctaggaataacattccttgg 2521427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 4559281 - 4559335
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||    
T  4559281 agggtgtgtttgtttcaagtttaccaaatttatttctaagaataacattccttgg 4559335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 21737753 - 21737703
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  21737753 tgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgg 21737703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 26309993 - 26310043
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  26309993 tgtgtttgtttcaagtttaccaaatttattcctaggaatagcattccttgg 26310043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 45693915 - 45693965
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  45693915 tgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgg 45693965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 5770458 - 5770405
Alignment:
Q  129 gggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| |  ||||||||| ||||||||||||||||||||    
T  5770458 gggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttgg 5770405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 638318 - 638370
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||| || ||||| || ||||||||||||||||||||||||||||||    
T  638318 ggtgtgtttgatttaagtttaccaaatttattcctaggaataacattccttgg 638370  T

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Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 13760692 - 13760743
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||  | ||||||||| ||||||||||||||||||||    
T  13760692 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgg 13760743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 1623078 - 1623128
Alignment:
Q  132 tgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||| || ||||||||||||||||| ||||||||| |||||    
T  1623078 tgtgtttgtttcaattttactaaatttattcctagtaataacatttcttgg 1623128  T

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Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 2050588 - 2050642
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| |  |||||||||  |||||||||||||||||||    
T  2050588 agggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttgg 2050642  T

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Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 9734190 - 9734141
Alignment:
Q  133 gtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||| ||||| || ||||||||| ||||||||||||||||||||    
T  9734190 gtgtttgttttaagtttaccaaatttatttctaggaataacattccttgg 9734141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 39819414 - 39819466
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||| || || |||||||||| |||||||||||||| ||||    
T  39819414 ggtgtgtttgtttcaaatttaccaaatttattcataggaataacattctttgg 39819466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 18714006 - 18713951
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||| |||||| | || |||||||||  |||||||||||||||||||    
T  18714006 tagggtgtgtttgattcaagcttaccaaatttatttataggaataacattccttgg 18713951  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 3902182 - 3902232
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    |||||||||||||||||| || | |||||||  ||||||||||||||||||    
T  3902182 gtgtgtttgtttcaagtttaccatatttatttttaggaataacattccttg 3902232  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 7007306 - 7007360
Alignment:
Q  127 tagggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttg 181  Q
    |||||||||||||||| ||||| || |||||||||  ||||||||||||| ||||    
T  7007306 tagggtgtgtttgttttaagtttaccaaatttattattaggaataacatttcttg 7007360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 8868980 - 8868938
Alignment:
Q  136 tttgtttcaagttcactaaatttattcctaggaataacattcc 178  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||    
T  8868980 tttgtttcaagtttactaaatttattcctacgaataactttcc 8868938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 11763737 - 11763695
Alignment:
Q  140 tttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||| || |||||||||| |||||||||||||||||||    
T  11763737 tttcaagtttaccaaatttattcttaggaataacattccttgg 11763695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 14832536 - 14832585
Alignment:
Q  131 gtgtgtttgtttcaagttcactaaatttattcctaggaataacattcctt 180  Q
    |||||||||||||||||| || ||||||||| | | ||||||||||||||    
T  14832536 gtgtgtttgtttcaagtttaccaaatttatttccaagaataacattcctt 14832585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 5003182 - 5003130
Alignment:
Q  130 ggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||| || || || |||||||||  |||||||||||||||||||    
T  5003182 ggtgtgtttgtttaaaatttaccaaatttatttataggaataacattccttgg 5003130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 25724753 - 25724801
Alignment:
Q  134 tgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||| |||| ||||||||| | ||||||| ||||||||    
T  25724753 tgtttgtttcaagtttactagatttattcccaagaataactttccttgg 25724801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 27358303 - 27358263
Alignment:
Q  136 tttgtttcaagttcactaaatttattcctaggaataacatt 176  Q
    ||||||| ||||| || ||||||||||||||||||||||||    
T  27358303 tttgttttaagtttaccaaatttattcctaggaataacatt 27358263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 181
Target Start/End: Original strand, 41750276 - 41750304
Alignment:
Q  153 aaatttattcctaggaataacattccttg 181  Q
    |||||||||||||||||||||||||||||    
T  41750276 aaatttattcctaggaataacattccttg 41750304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 45408981 - 45409021
Alignment:
Q  136 tttgtttcaagttcactaaatttattcctaggaataacatt 176  Q
    ||||||| ||||| || ||||||||||||||||||||||||    
T  45408981 tttgttttaagtttaccaaatttattcctaggaataacatt 45409021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 201648 - 201702
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  201648 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 201702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 143342 - 143389
Alignment:
Q  135 gtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||    
T  143342 gtttgtttcaagtttaccaaatttattcctaggaataacattccttgg 143389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 3914 - 3860
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  3914 agggtgtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttgg 3860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 3808 - 3747
Alignment:
Q  182 gttaacattataatcttcccatgaaccttaaaaataggaagattaataggtaattacacata 243  Q
    |||||||||||||| |||| | |||||||||||||||| |   |||||||||||||||||||    
T  3808 gttaacattataatattccaaggaaccttaaaaatagggaatataataggtaattacacata 3747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 4188 - 4242
Alignment:
Q  128 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 182  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  4188 agggtgtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttgg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 4294 - 4352
Alignment:
Q  182 gttaacattataatcttcccatgaaccttaaaaataggaagattaataggtaattacac 240  Q
    |||||||||||||| |||| | |||||||||||||||| |   ||||||||||||||||    
T  4294 gttaacattataatattccaaggaaccttaaaaatagggaatataataggtaattacac 4352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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