View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0291_low_8 (Length: 301)
Name: NF0291_low_8
Description: NF0291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0291_low_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 66 - 301
Target Start/End: Complemental strand, 36632712 - 36632482
Alignment:
| Q |
66 |
tctggtacctcaatttcaggctctggtggctcctcctcgtacctgcatcgttttaatcatgagtaataatacaaaccctaattaattatgtgagtgagag |
165 |
Q |
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| T |
36632712 |
tctggtacctcaatttcaggctctggtggctcctcctcgtacctgcatcgttttaatcatgagtaataatacaaaccctaattaattatgtgagtgagag |
36632613 |
T |
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| Q |
166 |
agggaaatagaaagagaaccccatgtcgatatcttcgtagtcatcgtcggccatggttgttgaattgaggaaggtaacctctgctctgctagcttaagaa |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
36632612 |
agggaaatagaaagagaaccccatgtcgatatcttcgtagtcatcgtcggccatggttgttgaattgaggaaggtaacctc-----tgctagcttaagaa |
36632518 |
T |
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| Q |
266 |
gaccgctgccctaaaaccccactcggacggaatgaa |
301 |
Q |
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||| |||||||||||||||||||||||||||||||| |
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| T |
36632517 |
gactgctgccctaaaaccccactcggacggaatgaa |
36632482 |
T |
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