View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0292_high_6 (Length: 333)
Name: NF0292_high_6
Description: NF0292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0292_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 29 - 309
Target Start/End: Complemental strand, 3149375 - 3149095
Alignment:
| Q |
29 |
agaagacagacaaatcattagtaaatgtaagagtatggttctatgcacatctagtagaactgaaagctttaaatttcttggtcttgatttaaatccaagc |
128 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3149375 |
agaagacagacaaatcattagtacatgtaagagtatggttctatgcacatctagtagaactgaaagctttaaatttcttggtcttgatttaaatccaagc |
3149276 |
T |
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| Q |
129 |
taagtcagaagccatgcactgatttaataagttaaaacgataatatacaaacggcagcagcatttaataaaatcttaagaaccctacccatttccagatc |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3149275 |
taagtcagaagccatgcactgatttaataagttaaaacgataatatacaaacggcagcagcatttaataaaatcttaagaaccctacccatttccagatc |
3149176 |
T |
|
| Q |
229 |
agtaagcatgaaagatcttaccctactagacagaaagaaacaagatacagaaaacacagcaaaaatgttatactccatgtc |
309 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3149175 |
agtaagcatgaaagatcttaccctactagacagaaagaaacaagatacagaaaacacagcaaaaatgttatactccatgtc |
3149095 |
T |
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