View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0292_low_10 (Length: 286)
Name: NF0292_low_10
Description: NF0292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0292_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 21919256 - 21919463
Alignment:
| Q |
1 |
ttcacgcgcttggttgaggtgttttcgggccgcgccggaggaggagggtggtttaggtgttggtatagtgaaacattgaggagttcagtttgtgaaggtg |
100 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
21919256 |
ttcacgcgattggttgaggtgttttcgggccgcgccggaggaggagggtggtttaggtgttggtatagtgaaacattgaggagttcaatttgtgaaggtg |
21919355 |
T |
|
| Q |
101 |
ggagagtgaggatggtggtggagaggattggaatggcaaagggtggtgagagtttgggtgatgttatttgaagaagtgaagatgaggagttgcctttgtt |
200 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
21919356 |
ggagagtgaggatggtggtggagaggattggaatggcaaagggtggtgagagtttgggtgatgttattggaagaagtgaagatgaggagttgcctttgtt |
21919455 |
T |
|
| Q |
201 |
tgatgatg |
208 |
Q |
| |
|
|||||||| |
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| T |
21919456 |
tgatgatg |
21919463 |
T |
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